FC925037
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CLOBA (ATP synthase subunit beta OS=Clostridium botulinum (strain Alaska E43 / Type E3) GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 47/150 (31.33%), Postives = 69/150 (46.00%), Query Frame = 3 Query: 180 VTGVAGPLVIL--DKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 V V GP+V + D P Y ++I +G+ T+ V + E T G+ V T + + PV +LGR+FN GKPIDN + E I + + ++ EM +TGI ID++ RG KI LF AG+ Sbjct: 8 VVQVIGPVVDIKFDSDSLPNLYNAISIDMGERTLIAEVEQHVGDDIVRTIAMEATEGLKRGMDAVD-TEKAISVPVGDKVLGRLFNVLGKPIDNAGEVEAEEIYPIHRPAPSFKDQAVEPEMFETGIKVIDLLAPYQRGGKIGLFGGAGV 156
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CHLP8 (ATP synthase subunit beta OS=Chlorobaculum parvum (strain NCIB 8327) GN=atpD PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 5.342e-11 Identity = 55/208 (26.44%), Postives = 97/208 (46.63%), Query Frame = 3 Query: 165 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQ-----------AGLVKRLEKTDNL----LEDGEEDNFAIV 734 M+ ++ + GP+V +D +G P + + + DG+ + + GE+ V + EGT G+ + TG ++ PV ++LGR+ N G+PID P+ + I S+ E + EM +TGI ID++ +RG K LF AG+ + ++ AG+ +R + ++L +E G D A+V Sbjct: 1 MQEGKISQIIGPVVDVDFPEGQLPSILDALTVTRQDGSKLVLETQQHLGEERVRTISMEGTDGLVRGMSVAN-TGRPIQAPVGAEVLGRMLNVVGEPIDGKGPVPSKKSYPIHRSAPKFDELSTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKEQSGYSVFAGVGERTREGNDLWHEMMESGVIDKTALV 207
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_PSEHT (ATP synthase subunit beta OS=Pseudoalteromonas haloplanktis (strain TAC 125) GN=atpD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 43/132 (32.58%), Postives = 68/132 (51.52%), Query Frame = 3 Query: 228 PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 P Y+ + + GD T +V + G V + GT+ + +V TGE ++ PV LGRI N G+PID PI E + I ++ E++ E+++TGI ID++ A+G K+ LF AG+ Sbjct: 24 PAVYDALRVTDGDLTGLTLEVQQQLGGGVVRTIAMGTTDGLRRGASVMNTGESIQVPVGKATLGRIMNVLGEPIDEAGPIGEEDRMSIHRAAPTYEEQSSSVELLETGIKVIDLVCPFAKGGKVGLFGGAGV 155
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_NOSP7 (ATP synthase subunit beta OS=Nostoc punctiforme (strain ATCC 29133 / PCC 73102) GN=atpD PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 52/165 (31.52%), Postives = 76/165 (46.06%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVD-------GEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQI 650 +T + GP+V + K G K +I N GT GQ + + G+ V V T G+ F TG + PV LGRIFN G+P+DN P+ EA L I S+ ++ + +TGI +D++ RG KI LF AG+ I ++ Sbjct: 13 ITQIIGPVVDV-KFPGGKLPQIYNALKIVGTNESGQEINITVEVQQLLGDNQVRTVAMSSTEGLVRGFEVTD-TGAPITVPVGKATLGRIFNVLGEPVDNRGPVNAEASLPIHRSAPKFTDLETKPSVFETGIKVVDLLTPYRRGGKIGLFGGAGVGKTVIMMEL 175
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPA2_RHOS4 (ATP synthase subunit alpha 2 OS=Rhodobacter sphaeroides (strain ATCC 17023 / 2.4.1 / NCIB 8253 / DSM 158) GN=atpA2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 42/139 (30.22%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 596 + +A LV ++ + G + E+V G G VL +D E V + + + + + T V+ TG++L PV +LGR+ + G+P+D P ILPEA L+I + +R E ++TG+ +D + ++ RGQ+ Sbjct: 29 IATLADGLVEVEGLPGARLGEVVRFAGG----AEGLVLTLDPETVQVALLDPGAALGSG-TEVRRTGQLLSVPVGQGLLGRVVDPLGRPLDGLPAILPEARLEIERPAPGIVDRDMVAEPVETGLLVVDALFAVGRGQR 162
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPA2_RHOS1 (ATP synthase subunit alpha 2 OS=Rhodobacter sphaeroides (strain ATCC 17029 / ATH 2.4.9) GN=atpA2 PE=3 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.977e-11 Identity = 42/139 (30.22%), Postives = 74/139 (53.24%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQK 596 + +A LV ++ + G + E+V G G VL +D E V + + + + + T V+ TG++L PV +LGR+ + G+P+D P ILPEA L+I + +R E ++TG+ +D + ++ RGQ+ Sbjct: 29 IATLADGLVEVEGLPGARLGEVVRFAGG----AEGLVLTLDPETVQVALLDPGAALGSG-TEVRRTGQLLSVPVGQGLLGRVVDPLGRPLDGLPAILPEARLEIERPAPGIVDRDMVAEPVETGLLVVDALFAVGRGQR 162
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_LACPL (ATP synthase subunit beta OS=Lactobacillus plantarum GN=atpD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 50/153 (32.68%), Postives = 74/153 (48.37%), Query Frame = 3 Query: 180 VTGVAGPLVILDKVKGPKYYEIVNIRL----GDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLD-ISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 V V GP+V ++ K +I N + D T+ LE+ +GT G+ + TV+ TG + PV + LGR+FN G+ ID GP P+A + I + E T E+++TGI ID++ RG KI LF AG+ Sbjct: 6 VVQVIGPVVDVEFSLNDKLPDINNALIIQKDNDDTLTVEVSLELGDGVVRTVAMDGTDGL-RRGMTVEDTGSSITVPVGKETLGRVFNVLGETIDGGPEFGPDAERNPIHRDAPKYDELTTSTEVLETGIKVIDLLAPYVRGGKIGLFGGAGV 157
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_COLP3 (ATP synthase subunit beta OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=atpD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 46/135 (34.07%), Postives = 70/135 (51.85%), Query Frame = 3 Query: 228 PKYYEIVNIRLGDGTMRRGQVLEVD---GEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 P+ Y+ + I GD G VLEV G V + GTS + V TG+ ++ PV ++ LGRI N G+PID PI + I + +E++ E+++TGI ID++ A+G K+ LF AG+ Sbjct: 24 PQVYDALKITEGD---LEGLVLEVQQQLGGGVVRTIAMGTSDGLRRGLNVVNTGQGIQVPVGVETLGRIMNVLGEPIDEAGPIGEKDRWSIHREAPAYAEQSMSNELLETGIKVIDLVCPFAKGGKVGLFGGAGV 155
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB_CHLCH (ATP synthase subunit beta OS=Chlorobium chlorochromatii (strain CaD3) GN=atpD PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 58/208 (27.88%), Postives = 98/208 (47.12%), Query Frame = 3 Query: 165 MEYRTVTGVAGPLVILDKVKG--PKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQV-FEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHN----EIAAQICRQ-------AGLVKRLEKTDNL----LEDGEEDNFAIV 734 M+ ++ + GP+V +D +G P + + ++ DG+ + + GE+ V V E T G+ V TG ++ PV ++LGR+ N G PID P+ + I S+ + + EM +TGI ID++ +RG K LF AG+ E+ I +Q AG+ +R + ++L +E G D A+V Sbjct: 1 MQEGKISQIIGPVVDVDFPEGRLPSILDALTVKREDGSKLVLETQQHLGEERVRTVAMESTDGLVRGMGVVN-TGAAIQVPVGAEVLGRMLNVVGDPIDGRGPVNSKKTYSIHRSAPKFEDISTKAEMFETGIKVIDLLEPYSRGGKTGLFGGAGVGKTVLIMELINNIAKQQSGFSVFAGVGERTREGNDLWHEMMESGVIDKTALV 207
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: ATPB2_PSEA6 (ATP synthase subunit beta 2 OS=Pseudoalteromonas atlantica (strain T6c / BAA-1087) GN=atpD2 PE=3 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 9.112e-11 Identity = 46/135 (34.07%), Postives = 68/135 (50.37%), Query Frame = 3 Query: 228 PKYYEIVNIRLGDGTMRRGQVLEVD---GEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGL 623 PK Y+ + I GD +G LEV G V + GT+ + TV TGE ++ PV LGRI + G PID PI E + I + +++ E+++TGI ID++ A+G K+ LF AG+ Sbjct: 24 PKIYDALRITEGD---LQGLTLEVQQQLGGGVVRTIALGTTDGLRRGLTVDNTGEAIQVPVGKATLGRIMDVLGNPIDEAGPIGEEERMSIHREAPTYEDQSSSIELLETGIKVIDLVCPFAKGGKVGLFGGAGV 155 The following BLAST results are available for this feature:
BLAST of FC925037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 200
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925037 ID=FC925037; Name=FC925037; organism=Citrus clementina; type=EST; length=736bpback to top |