FC925037

Overview
NameFC925037
Unique NameFC925037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRGC (V-type ATP synthase beta chain OS=Streptococcus gordonii (strain Challis / ATCC 35105 / CH1 / DL1 / V288) GN=atpB PE=3 SV=1)

HSP 1 Score: 213.386 bits (542), Expect = 1.028e-54
Identity = 108/194 (55.67%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  + E+V I+L DG+ R+GQVLEV  +KA+VQ+FEG+SGI+ +   V+FTG  L+ PVS DM+GRIFNG GKPID GP ILPE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPH E+AAQI RQA ++              ++NFA+V
Sbjct:    1 MSVIKEYRTVSEVVGPLMIVDQVAGVHFNELVEIQLHDGSKRQGQVLEVQEDKAMVQLFEGSSGINLEKAKVRFTGRPLELPVSEDMVGRIFNGMGKPIDGGPAILPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHKELAAQIARQATVL------------NSDENFAVV 182
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_METKA (V-type ATP synthase beta chain OS=Methanopyrus kandleri GN=atpB PE=3 SV=1)

HSP 1 Score: 211.846 bits (538), Expect = 2.991e-54
Identity = 107/199 (53.77%), Postives = 137/199 (68.84%), Query Frame = 3 
Query:  138 MEEGTLEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            M E       EY T++ V+GPL++++ V+G KY E+V +    G +RRGQVLE   + AVVQVFEGTSG+D   T V+FTGE L+ PVS D+LGRI NG G+PID GP I+PE  LDI G+ INP+ R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHNE+AAQI RQA +             GEE+ FA+V
Sbjct:    1 MAEAERPAGKEYTTISEVSGPLMVVEGVEGAKYGEVVEVETPTGEVRRGQVLEARRDAAVVQVFEGTSGLDTTSTKVRFTGETLRIPVSTDLLGRILNGRGEPIDGGPEIVPEDELDIHGAPINPAARKYPSDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQATV------------PGEEEEFAVV 187
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRP8 (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M18 GN=atpB PE=3 SV=1)

HSP 1 Score: 211.46 bits (537), Expect = 3.907e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGARRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPZ (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M49 (strain NZ131) GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHSLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPG (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M5 (strain Manfredo) GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPF (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M4 (strain MGAS10750) GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPD (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M2 (strain MGAS10270) GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPC (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M12 (strain MGAS9429) GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPB (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M12 (strain MGAS2096) GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182
[Close]
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRP6 (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M6 GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3 
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182
The following BLAST results are available for this feature:
BLAST of FC925037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
VATB_STRGC1.028e-5455.67V-type ATP synthase beta chain OS=Streptococcus go... [more]
VATB_METKA2.991e-5453.77V-type ATP synthase beta chain OS=Methanopyrus kan... [more]
VATB_STRP83.907e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPZ5.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPG5.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPF5.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPD5.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPC5.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPB5.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRP65.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB10FM1 TF Citrus clementina cDNA clone KN0AAP8YB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925037 ID=FC925037; Name=FC925037; organism=Citrus clementina; type=EST; length=736bp
CTCATTGCCCCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTGTCTCACACACACTCACAGAGATCACAAGAAAGGCCCAAAAAAGAAAA
AAAATTGCAAATGGGTGTGGCACAAAACAATGTTGACATGGAGGAGGGTA
CTCTGGAAGTCGCCATGGAGTACAGAACAGTCACCGGAGTTGCTGGGCCT
CTAGTTATCCTTGATAAAGTCAAGGGACCCAAATATTATGAGATTGTCAA
TATTCGGTTGGGAGATGGAACAATGCGACGTGGTCAGGTCCTAGAAGTTG
ATGGAGAGAAAGCTGTTGTTCAGGTCTTTGAAGGGACATCCGGAATTGAC
AATAAATTTACAACTGTGCAGTTTACAGGGGAGGTTCTGAAGACTCCTGT
CTCATTGGATATGCTTGGGCGCATTTTTAATGGTTCTGGGAAACCCATTG
ATAATGGTCCCCCAATTTTGCCGGAGGCTTACTTGGATATATCCGGAAGT
TCTATCAACCCTAGTGAGAGAACCTATCCTGAAGAGATGATACAGACAGG
GATTTCTACCATTGATGTGATGAACTCCATTGCTAGAGGACAAAAGATCC
CTCTTTTTTCTGCTGCCGGTCTTCCCCATAATGAAATTGCTGCTCAGATT
TGTCGCCAGGCTGGTTTAGTCAAGCGATTGGAGAAGACTGATAATCTTCT
TGAGGATGGGGAAGAGGACAACTTTGCAATTGTGTT
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