FC925037

Overview
NameFC925037
Unique NameFC925037
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length736
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRP3 (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M3 GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRP1 (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M1 GN=atpB PE=3 SV=1)

HSP 1 Score: 211.075 bits (536), Expect = 5.103e-54
Identity = 106/194 (54.64%), Postives = 141/194 (72.68%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G+PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGQPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPM (V-type ATP synthase beta chain OS=Streptococcus pyogenes serotype M28 GN=atpB PE=3 SV=1)

HSP 1 Score: 210.305 bits (534), Expect = 8.704e-54
Identity = 106/194 (54.64%), Postives = 140/194 (72.16%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRTV+ V GPL+I+D+V G  Y E+V+I L +G  R+GQVLEV G+KA+VQ+FEG++GI+   T V+FTG  L+  VS DM+GRIF+G G PID GP ++PE YLDI G +INP  R YP+E IQTGIS ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              +DNFA+V
Sbjct:    1 MSVLKEYRTVSEVVGPLMIVDQVAGVHYNELVDITLHNGERRKGQVLEVQGDKAMVQLFEGSTGINLAKTKVRFTGHPLELAVSEDMVGRIFDGMGHPIDGGPELIPEKYLDIDGQAINPVARDYPDEFIQTGISAIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDDNFAVV 182          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_PYRAB (V-type ATP synthase beta chain OS=Pyrococcus abyssi GN=atpB PE=3 SV=1)

HSP 1 Score: 207.994 bits (528), Expect = 4.320e-53
Identity = 103/194 (53.09%), Postives = 137/194 (70.62%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            +E++ EY T++ + GPL+I++ VKG  Y E+V I    G  R+GQVL+     A+VQVFEGT  +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++            GEE++FA+V
Sbjct:    2 MEMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENLAIVQVFEGTRDLDVKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------------GEEESFAVV 183          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_METTH (V-type ATP synthase beta chain OS=Methanobacterium thermoautotrophicum GN=atpB PE=3 SV=2)

HSP 1 Score: 207.994 bits (528), Expect = 4.320e-53
Identity = 107/189 (56.61%), Postives = 136/189 (71.96%), Query Frame = 3
Query:  168 EYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            EY TVT V+GPL+I++ V+G  Y EIV I    G  RRGQVLEV  + AVVQVFEGTS ++ + T ++FTGE  K  VSLDM+GRIF+G+GKPID GP I+PE  LDI+GS +NP+ R +P E IQTGISTID MN++ RGQK+P+FS +GLPHNE+AAQI RQA ++             EE  FA++
Sbjct:    9 EYTTVTEVSGPLMIVEGVEGVAYSEIVEIETPTGEKRRGQVLEVREDLAVVQVFEGTSDLNTETTKIRFTGETAKIGVSLDMMGRIFDGTGKPIDGGPEIIPEKELDINGSPMNPAAREFPAEFIQTGISTIDGMNTLVRGQKLPIFSGSGLPHNELAAQIARQAKVL------------AEESEFAVI 185          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_PYRHO (V-type ATP synthase beta chain OS=Pyrococcus horikoshii GN=atpB PE=3 SV=1)

HSP 1 Score: 206.838 bits (525), Expect = 9.623e-53
Identity = 102/194 (52.58%), Postives = 137/194 (70.62%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            ++++ EY T++ + GPL+I++ VKG  Y E+V I    G  R+GQVL+     A+VQVFEGT  +D K T+V+FTGE LK PVS+DMLGRIFNG GKPID GP I+PE   D+ G+ +NP  R YP + IQTGIS ID MN++ RGQK+P+FS +GLPHN++AAQI RQA ++            GEE++FA+V
Sbjct:    2 MKMSKEYSTISKIYGPLMIVEGVKGVAYGEVVEIETESGEKRKGQVLDARENMAIVQVFEGTRDLDIKTTSVRFTGETLKVPVSMDMLGRIFNGIGKPIDGGPEIIPEDRRDVHGAPLNPVARAYPRDFIQTGISAIDGMNTLVRGQKLPIFSGSGLPHNQLAAQIARQAKVL------------GEEESFAVV 183          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRZJ (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain JJA) GN=atpB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.257e-52
Identity = 101/194 (52.06%), Postives = 140/194 (72.16%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRT + V GPL+I+++V    Y E+V I+L +G +RRGQVLE+  +KA+VQ+FEG+SGI+ + + ++F G  L+  VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+V
Sbjct:    1 MSVIKEYRTASEVVGPLMIVEQVNNVSYNELVEIQLHNGEIRRGQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDENFAVV 182          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPS (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain CGSP14) GN=atpB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.257e-52
Identity = 101/194 (52.06%), Postives = 140/194 (72.16%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRT + V GPL+I+++V    Y E+V I+L +G +RRGQVLE+  +KA+VQ+FEG+SGI+ + + ++F G  L+  VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+V
Sbjct:    1 MSVIKEYRTASEVVGPLMIVEQVNNVSYNELVEIQLHNGEIRRGQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDENFAVV 182          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPN (V-type ATP synthase beta chain OS=Streptococcus pneumoniae GN=atpB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.257e-52
Identity = 101/194 (52.06%), Postives = 140/194 (72.16%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRT + V GPL+I+++V    Y E+V I+L +G +RRGQVLE+  +KA+VQ+FEG+SGI+ + + ++F G  L+  VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+V
Sbjct:    1 MSVIKEYRTASEVVGPLMIVEQVNNVSYNELVEIQLHNGEIRRGQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDENFAVV 182          
BLAST of FC925037 vs. ExPASy Swiss-Prot
Match: VATB_STRPJ (V-type ATP synthase beta chain OS=Streptococcus pneumoniae (strain ATCC 700669 / Spain 23F-1) GN=atpB PE=3 SV=1)

HSP 1 Score: 206.453 bits (524), Expect = 1.257e-52
Identity = 101/194 (52.06%), Postives = 140/194 (72.16%), Query Frame = 3
Query:  153 LEVAMEYRTVTGVAGPLVILDKVKGPKYYEIVNIRLGDGTMRRGQVLEVDGEKAVVQVFEGTSGIDNKFTTVQFTGEVLKTPVSLDMLGRIFNGSGKPIDNGPPILPEAYLDISGSSINPSERTYPEEMIQTGISTIDVMNSIARGQKIPLFSAAGLPHNEIAAQICRQAGLVKRLEKTDNLLEDGEEDNFAIV 734
            + V  EYRT + V GPL+I+++V    Y E+V I+L +G +RRGQVLE+  +KA+VQ+FEG+SGI+ + + ++F G  L+  VS DM+GRIFNG GKPID GP ++PE YLDI G +INP  R YP+E IQTGIS+ID +N++ RGQK+P+FS +GLPHNE+AAQI RQA ++              ++NFA+V
Sbjct:    1 MSVIKEYRTASEVVGPLMIVEQVNNVSYNELVEIQLHNGEIRRGQVLEIHEDKAMVQLFEGSSGINLEKSKIRFAGHALELAVSEDMVGRIFNGMGKPIDGGPDLIPEKYLDIDGQAINPVSRDYPDEFIQTGISSIDHLNTLVRGQKLPVFSGSGLPHNELAAQIARQATVL------------NSDENFAVV 182          
The following BLAST results are available for this feature:
BLAST of FC925037 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 200
Match NameE-valueIdentityDescription
VATB_STRP35.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRP15.103e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_STRPM8.704e-5454.64V-type ATP synthase beta chain OS=Streptococcus py... [more]
VATB_PYRAB4.320e-5353.09V-type ATP synthase beta chain OS=Pyrococcus abyss... [more]
VATB_METTH4.320e-5356.61V-type ATP synthase beta chain OS=Methanobacterium... [more]
VATB_PYRHO9.623e-5352.58V-type ATP synthase beta chain OS=Pyrococcus horik... [more]
VATB_STRZJ1.257e-5252.06V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_STRPS1.257e-5252.06V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_STRPN1.257e-5252.06V-type ATP synthase beta chain OS=Streptococcus pn... [more]
VATB_STRPJ1.257e-5252.06V-type ATP synthase beta chain OS=Streptococcus pn... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YB10FM1 TF Citrus clementina cDNA clone KN0AAP8YB10, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925037 ID=FC925037; Name=FC925037; organism=Citrus clementina; type=EST; length=736bp
CTCATTGCCCCTCTCGCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCT
CTGTCTCACACACACTCACAGAGATCACAAGAAAGGCCCAAAAAAGAAAA
AAAATTGCAAATGGGTGTGGCACAAAACAATGTTGACATGGAGGAGGGTA
CTCTGGAAGTCGCCATGGAGTACAGAACAGTCACCGGAGTTGCTGGGCCT
CTAGTTATCCTTGATAAAGTCAAGGGACCCAAATATTATGAGATTGTCAA
TATTCGGTTGGGAGATGGAACAATGCGACGTGGTCAGGTCCTAGAAGTTG
ATGGAGAGAAAGCTGTTGTTCAGGTCTTTGAAGGGACATCCGGAATTGAC
AATAAATTTACAACTGTGCAGTTTACAGGGGAGGTTCTGAAGACTCCTGT
CTCATTGGATATGCTTGGGCGCATTTTTAATGGTTCTGGGAAACCCATTG
ATAATGGTCCCCCAATTTTGCCGGAGGCTTACTTGGATATATCCGGAAGT
TCTATCAACCCTAGTGAGAGAACCTATCCTGAAGAGATGATACAGACAGG
GATTTCTACCATTGATGTGATGAACTCCATTGCTAGAGGACAAAAGATCC
CTCTTTTTTCTGCTGCCGGTCTTCCCCATAATGAAATTGCTGCTCAGATT
TGTCGCCAGGCTGGTTTAGTCAAGCGATTGGAGAAGACTGATAATCTTCT
TGAGGATGGGGAAGAGGACAACTTTGCAATTGTGTT
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