FC925041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: COX10_KLULA (Protoheme IX farnesyltransferase, mitochondrial OS=Kluyveromyces lactis GN=COX10 PE=3 SV=1) HSP 1 Score: 125.561 bits (314), Expect = 3.591e-28 Identity = 75/180 (41.67%), Postives = 103/180 (57.22%), Query Frame = 1 Query: 310 SLIRHYGRCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 SL + Y Y +LSK RL++LV+ ++ +AL L L T GT + +ASAN++N E D +M RT RP+ G +S A +A++ G GT++L N A L SN+ LYA++YT LK+ H +NTWVGA+VGAIPPL+GW A+ L LY WQ PHF Sbjct: 133 SLKKTYIEPYLQLSKPRLTVLVMLSAICSYALSPYPATVLQLLSLT-VGTTLCSASANAINMGREPDFDRQMIRTQARPVVRGIVSPNQAFKFATAAGTLGTSILWLGVNPTVAFLGFSNIALYAWLYTSLKRKHIINTWVGALVGAIPPLMGWAASSPLSHPGAWCLAGLLYAWQFPHF 311
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE1_SHELP (Protoheme IX farnesyltransferase 1 OS=Shewanella loihica (strain ATCC BAA-1088 / PV-4) GN=cyoE1 PE=3 SV=1) HSP 1 Score: 125.176 bits (313), Expect = 4.691e-28 Identity = 69/174 (39.66%), Postives = 98/174 (56.32%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y E++K R+ L++ T G L + + L G M+A +A + N L + D M RT RPLP GRIS+ A+T+A+++ + G ALL W N LTA L ++LI YA +YT LK+ P N VG + GA+PPLLGWTA G + ++L ++ W PHF Sbjct: 18 RAYLEMTKPRVVALMLLTVLVGMCLAVPGAVPVQPLIAGLVGIGMMAGAAAAYNHLIDRRIDGLMARTYNRPLPKGRISITKALTFATAMAILGFALLYWAVNPLTAWLTFASLIGYAVIYTAYLKRATPQNIVVGGLAGAMPPLLGWTAITGEFHGHALLLVIIIFAWTPPHF 191
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE_SHEPA (Protoheme IX farnesyltransferase OS=Shewanella pealeana (strain ATCC 700345 / ANG-SQ1) GN=cyoE PE=3 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 8.001e-28 Identity = 71/174 (40.80%), Postives = 97/174 (55.75%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y+E++K ++ L++ T G L T+ L L G M+A SA + N L + D M RT RPLP GRIS+ A+++AS +G G +L N LTA L ++LI YA VYT LK+ P N VG + GA+PPLLGWTA G N ++L ++ W PHF Sbjct: 19 RAYYEMTKPKVVALMLLTVLVGMCLAVPGTVPLVPLIAGMAGIGMMAGSAAAFNHLIDRRIDGLMARTYNRPLPKGRISIIKAISFASILGTLGFIILYALVNPLTAWLTFASLIGYAVVYTAYLKRATPQNIVVGGLAGAMPPLLGWTAVTGEFHGNALLLVIIIFAWTPPHF 192
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: COXX_SYNP2 (Protoheme IX farnesyltransferase OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=ctaB PE=3 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 1.365e-27 Identity = 66/174 (37.93%), Postives = 100/174 (57.47%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 + Y++L+K R+ L++ T+ + S ID L T G + AASA +LN +++ D M+RT +RP+PSGR+ RHA+ +A +G +LL N+L+A LA S ++ Y VYT LK+ H N +G G+IPPL+GW A G + + IL A ++ W PHF Sbjct: 18 KSYYQLTKPRIIPLLLITTAASMWIASHGHIDPVKLLITLLGGTLAAASAQTLNCIYDQDIDFSMQRTRKRPIPSGRVQPRHALIFALILGSLSFSLLMVFVNLLSACLALSGIVFYMLVYTHWLKRHHVQNIVIGGAAGSIPPLVGWAAVTGQLDWSAWILFALIFLWTPPHF 191
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE_SHEHH (Protoheme IX farnesyltransferase OS=Shewanella halifaxensis (strain HAW-EB4) GN=cyoE PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27 Identity = 68/174 (39.08%), Postives = 97/174 (55.75%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y+E++K ++ L++ T G L + + L G M+A SA + N L + D M RT RPLP GR+S+ A+T++ S+G+ G +L N LTA L ++LI YA VYT LK+ P N VG + GA+PPLLGWTA G N ++L ++ W PHF Sbjct: 19 RAYYEMTKPKVVALMLLTVLVGMCLAVPGVVPIVPLIAGMAGIGMMAGSAAAFNHLIDRRIDGLMARTYNRPLPKGRVSIAKALTFSCSLGILGFVVLYVLVNPLTAWLTFASLIGYAVVYTAYLKRATPQNIVVGGLAGAMPPLLGWTAVTGEFHGNALLLVIIIFAWTPPHF 192
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE_IDILO (Protoheme IX farnesyltransferase OS=Idiomarina loihiensis GN=cyoE PE=3 SV=1) HSP 1 Score: 123.25 bits (308), Expect = 1.782e-27 Identity = 69/175 (39.43%), Postives = 102/175 (58.29%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAG-TALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y EL+K R+ L++ T+ G L + + L L TG +++A+A ++N L + DAKM RT+RRPLP G +S T+A+S+GV G L AW N LTA L ++++ YA VYT LK+ P N +G + GA PPLLGWT+ ++ ++L ++ W PHF Sbjct: 18 RDYLELTKPRVVALLLLTAVVGMCLATEELVSLKVLVPALTGIGLMSAAAAAINHLVDRHIDAKMARTLRRPLPQGNLSPAKVTTFAASIGVIGFVTLYAW-VNPLTAWLTFASMVGYAVVYTMFLKRATPQNIVIGGLAGAAPPLLGWTSVTNEINAPAVLLVMIIFTWTPPHF 191
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: COXX_SYNY3 (Protoheme IX farnesyltransferase OS=Synechocystis sp. (strain PCC 6803) GN=ctaB PE=3 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 2.328e-27 Identity = 65/174 (37.36%), Postives = 101/174 (58.05%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 + Y++L+K R+ L++ T+ + S +DL L T G + AASA +LN +++ D +M RT RP+P+G++ RHA+ +A ++GV ALLA N+L+ LA S ++ Y VYT LK+ N +G G+IPPL+GW A G +S +L A ++ W PHF Sbjct: 19 KSYYQLTKPRIIPLLLITTAASMWIASEGRVDLPKLLITLLGGTLAAASAQTLNCIYDQDIDYEMLRTRARPIPAGKVQPRHALIFALALGVLSFALLATFVNVLSGCLALSGIVFYMLVYTHWLKRHTAQNIVIGGAAGSIPPLVGWAAVTGDLSWTPWVLFALIFLWTPPHF 192
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE_SHEAM (Protoheme IX farnesyltransferase OS=Shewanella amazonensis (strain ATCC BAA-1098 / SB2B) GN=cyoE PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 3.971e-27 Identity = 66/174 (37.93%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y E++K ++ L++ T G L + L L G M+A +A ++N L + D M RT RPLP G++ V HA T+A+ + + G A L W N LTA L ++L+ YA VYT LK+ P N +G + GA+PPLLGWTA +G++L ++ W PHF Sbjct: 19 RAYLEMTKPKVVTLMLLTVLVGMCLALPGAVPLQPLIAGMLGIAMMAGAAAAMNHLIDRRIDGLMARTYNRPLPKGKVPVSHAATFAALLALLGFACLYWLVNPLTAWLTLASLLGYAVVYTAYLKRATPQNIVIGGLAGAMPPLLGWTAVTNDFHGHGLLLVIIIFAWTPPHF 192
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE1_SHEWM (Protoheme IX farnesyltransferase 1 OS=Shewanella woodyi (strain ATCC 51908 / MS32) GN=cyoE1 PE=3 SV=1) HSP 1 Score: 120.939 bits (302), Expect = 8.846e-27 Identity = 67/174 (38.51%), Postives = 97/174 (55.75%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y+E++K ++ L++ T G L + L L + G M+A +A + N L + D M RT RPLP GR+S+ A+T++ S+ V G LL N LTA L ++L+ YA VYT LK+ P N VG + GA+PPLLGWT+ G N ++L ++ W PHF Sbjct: 20 RAYYEMTKPKVVALMLLTVLVGMCLALPGAVPLQPLIFGLLGIGMMAGAAAAFNHLIDRRIDGLMARTYNRPLPKGRVSITKALTFSISLAVLGFVLLYTLVNELTAWLTFASLLGYAVVYTAYLKRATPQNIVVGGLAGAMPPLLGWTSVTGEFHGNALLLVIIIFAWTPPHF 193
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE_ALHEH (Protoheme IX farnesyltransferase OS=Alkalilimnicola ehrlichei (strain MLHE-1) GN=cyoE PE=3 SV=2) HSP 1 Score: 120.168 bits (300), Expect = 1.509e-26 Identity = 72/174 (41.38%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYT-PLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y L+K R+ +L+V T+ G L S + L G + A SA +LN L + DA M RT RRPLPSG + + ++S +GVAG +LA N LTA L ++LI YA VYT LK+ P N +G GA PPLLGWTA G V + ++L ++ W PHF Sbjct: 16 RDYLTLTKPRVVVLMVFTAIVGMFLASPGQVPWVALTVGSLGIALAAGSAAALNHLADQRIDAIMARTRRRPLPSGHLRPLQVLGFSSLLGVAGLGMLALWINPLTAALTFASLIGYALVYTLYLKRATPQNIVIGGAAGAAPPLLGWTAVTGSVDAHALLLFLIVFVWTPPHF 189 The following BLAST results are available for this feature:
BLAST of FC925041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 479
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925041 ID=FC925041; Name=FC925041; organism=Citrus clementina; type=EST; length=851bpback to top |