FC925041
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: COXX_GRAFK (Protoheme IX farnesyltransferase OS=Gramella forsetii (strain KT0803) GN=ctaB PE=3 SV=1) HSP 1 Score: 120.168 bits (300), Expect = 1.509e-26 Identity = 71/169 (42.01%), Postives = 100/169 (59.17%), Query Frame = 1 Query: 343 ELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 E++K RL++ VV +S G+ LG+ TID + G ++ ++N+ NQ+ E + DA M RT RPLP+GR+SV A T AS+ V G +L + N TA A ++ LY +YTPLK P++ +VGA GAIP +LGW AA G S+ L +FWQ PHF Sbjct: 19 EITKMRLAISVVFSSVAGYFLGA-DTIDFVTVTLLAIGGYLMVGASNAYNQIIERNLDALMDRTKNRPLPAGRMSVPVAFTIASAFTVLGLVVL-YVINPKTAMFGAISIFLYVSIYTPLKTKTPLSVFVGAFPGAIPFMLGWVAASGSFSIEPGTLFMIQFFWQFPHF 185
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: COXX_ANADE (Protoheme IX farnesyltransferase OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=ctaB PE=3 SV=2) HSP 1 Score: 119.783 bits (299), Expect = 1.971e-26 Identity = 72/168 (42.86%), Postives = 92/168 (54.76%), Query Frame = 1 Query: 346 LSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 LSK RLS LV+ T G L G I A T T +V +AN+LN E DA+M+RT RPLP+GR+ A+ + +L+ AN LTA LA L+ Y VYTP+KQ +VGA+ GAIPPL+GWT+ G V G+ L L+ WQ PHF Sbjct: 24 LSKPRLSGLVMITCAGGMWLAPGQ-IGAARAVLTVLATAVVVGAANALNCYLERDIDARMRRTRDRPLPAGRVDPFVALGLGIAAPAFAIPILSLAANGLTALLALVALLTYVLVYTPMKQRSATALFVGAVPGAIPPLMGWTSVTGGVDAGGLALFGLLFAWQLPHF 190
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: COX10_ASHGO (Protoheme IX farnesyltransferase, mitochondrial OS=Ashbya gossypii GN=COX10 PE=3 SV=1) HSP 1 Score: 119.398 bits (298), Expect = 2.574e-26 Identity = 70/171 (40.94%), Postives = 97/171 (56.73%), Query Frame = 1 Query: 337 YWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 Y +L+K RL++LV+ ++ +AL L L T GT + +A+AN +N E D +M RT RP+ G ++ A +++ GV GTA+L N A L ASN++LY++ YT LK+ H +NTW GAI GAIPPL+GW AA L LY WQ PHF Sbjct: 125 YIQLAKPRLTVLVMLSAICSYALSPYPATVLELLSLT-VGTTLCSAAANGINMGREPDFDRQMMRTQARPVVRGLVTPMQAYKFSAVSGVIGTAILYAGVNPTVALLGASNIVLYSWFYTSLKRKHIINTWFGAITGAIPPLMGWAAASPLTHPGCWCLAGLLYAWQFPHF 294
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE_COLP3 (Protoheme IX farnesyltransferase OS=Colwellia psychrerythraea (strain 34H / ATCC BAA-681) GN=cyoE PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.390e-26 Identity = 63/174 (36.21%), Postives = 101/174 (58.05%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y++++K ++ L+V T+ G +L + L G +++++A ++N + + D M RT RPLP+G+ISV +A+ +A+S+ + G +L N LTA L + L+ Y+FVYT LK+ P N +G + GAIPPLLGWTA V N ++L ++ W PHF Sbjct: 22 RAYYDITKPKVVALLVLTALVGMSLSVPGALPWQRLIPAMLGIGLLSSAAAAINHIVDEKIDTVMGRTHNRPLPAGKISVTNAIVFATSIALLGFIILYALVNPLTAFLTLAGLVGYSFVYTMYLKRATPQNITIGGLAGAIPPLLGWTAMTNEVVPNALLLVLIIFTWTPPHF 195
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE1_PSEPF (Protoheme IX farnesyltransferase 1 OS=Pseudomonas fluorescens (strain Pf0-1) GN=cyoE1 PE=3 SV=2) HSP 1 Score: 118.627 bits (296), Expect = 4.390e-26 Identity = 68/174 (39.08%), Postives = 100/174 (57.47%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y EL+K ++ +L++ TS G L + + + L + G + A A ++N + + DA M RT +RPL GR+S A+T+A + + G ALL N LTA L ++L+ YA +YT LK+ P N +G + GA PPLLGWTAA GHVS ++L ++ W PHF Sbjct: 15 RDYLELTKPKVVVLMLITSLVGMFLATRAGVPWTVLVFGNLGIALCAGGAAAVNHVVDRRIDAVMARTHKRPLADGRVSPTGALTFALVLALLGQALLLTFTNPLTAWLTLASLLGYAVIYTGFLKRATPQNIVIGGLAGAAPPLLGWTAATGHVSAEPLLLVLIIFAWTPPHF 188
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: COXX_SYNJA (Protoheme IX farnesyltransferase OS=Synechococcus sp. (strain JA-3-3Ab) GN=ctaB PE=3 SV=1) HSP 1 Score: 118.627 bits (296), Expect = 4.390e-26 Identity = 68/174 (39.08%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y +L K ++ L++ T T A+ D T G M AA+AN +N +++ D M+RT RPLPSGRI RHA+ +A + V LLA N+L A LA + +++Y VYT LK+ P N +G GAIPPL+GW AA G +S ++ A ++ W PHF Sbjct: 17 RSYSQLVKPKIIALLLMT--TAGAMWMAGNTDPFKFGVTLLGGGMAAAAANVINMVYDADIDRMMERTRHRPLPSGRIRARHALRFAGILAVMSFGLLACFTNLLAASLAMAGILVYVGVYTHWLKRSSPQNIVIGGAAGAIPPLVGWAAATGELSWAAWVMFALIFLWTPPHF 188
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE1_PSEF5 (Protoheme IX farnesyltransferase 1 OS=Pseudomonas fluorescens (strain Pf-5 / ATCC BAA-477) GN=cyoE1 PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.734e-26 Identity = 68/174 (39.08%), Postives = 100/174 (57.47%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y EL+K ++ +L++ TS G L + + + L + G + A A ++N + + DA M RT +RPL GR+S R A+ +A + +AG ALL N LTA L ++L+ YA VYT LK+ P N +G + GA PPLLGW AA GH+S ++L ++ W PHF Sbjct: 16 RDYLELTKPKVVVLMLITSLVGMFLATRAGVPWTVLVFGNLGIALCAGGAAAVNHVVDRRIDALMARTHKRPLAEGRVSPRAALAFALLLALAGQALLLTFTNPLTAWLTLASLLGYAVVYTGFLKRATPQNIVIGGLAGAAPPLLGWVAATGHMSAEPLLLVLIIFAWTPPHF 189
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: COXX_TRIEI (Protoheme IX farnesyltransferase OS=Trichodesmium erythraeum (strain IMS101) GN=ctaB PE=3 SV=1) HSP 1 Score: 118.242 bits (295), Expect = 5.734e-26 Identity = 64/174 (36.78%), Postives = 99/174 (56.90%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTPLKQIHPV-NTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 + Y++L+K R+ +L++ T+ G LG+ + L L T TG + + +AN++N +++ D M+RT RP+PSGR+ R A+ +A ++ LL AN+L A LA S ++ Y VYT + H V N +G GAIPPL+GW A G +S +L A + W PHF Sbjct: 21 KSYYQLTKPRIILLLLITTAAGMWLGAKGEVSLFLLFVTLTGGALASGAANAINCIYDSDIDYIMERTRWRPIPSGRVKPRDALIFALTLAATSFTLLTVFANLLAALLAMSGIVFYVGVYTHWLKRHSVQNIVIGGAAGAIPPLVGWAAVTGELSWAAWLLFAIIVVWTPPHF 194
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE_SHESH (Protoheme IX farnesyltransferase OS=Shewanella sediminis (strain HAW-EB3) GN=cyoE PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.780e-26 Identity = 67/174 (38.51%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y+E++K ++ L++ T G L ++ L L G M+A +A + N L + D M RT RPLP GR+S+ A+T+A S+ G LL N LTA L ++LI YA VYT LK+ P N VG + GA+PPLLGWT+ G + ++L ++ W PHF Sbjct: 22 RPYYEMTKPKVVALMLLTVLVGMCLAVPGSVPLQPLVIGMIGIGMMAGAAAAFNHLIDRKIDGLMARTYNRPLPKGRVSIPKALTFAISLAALGFVLLYTLVNELTAWLTFASLIGYALVYTAYLKRATPQNIVVGGLAGAMPPLLGWTSVTGEFHGHALLLVIIIFAWTPPHF 195
BLAST of FC925041 vs. ExPASy Swiss-Prot
Match: CYOE1_SHESM (Protoheme IX farnesyltransferase 1 OS=Shewanella sp. (strain MR-4) GN=cyoE1 PE=3 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 9.780e-26 Identity = 65/174 (37.36%), Postives = 96/174 (55.17%), Query Frame = 1 Query: 331 RCYWELSKARLSMLVVATSGTGFALGSGSTIDLAGLCWTCTGTMMVAASANSLNQLFEISNDAKMKRTMRRPLPSGRISVRHAVTWASSVGVAGTALLAWKANMLTAGLAASNLILYAFVYTP-LKQIHPVNTWVGAIVGAIPPLLGWTAAVGHVSLNGMILPAALYFWQKPHF 849 R Y+E++K ++ L++ T G L + + + L G M+A SA +LN L + D M RT RPLP GR+S R A+ +A+ +G G +L N LTA L ++LI YA +YT LK+ P N +G + GA+PPLLGWTA + ++L ++ W PHF Sbjct: 18 RAYFEMTKPKVVALMLLTVLVGMCLAMPTILPVKPLVAGLLGIAMMAGSAAALNHLIDRRIDGMMARTYNRPLPKGRVSARRALLFAALLGSLGFVILYVFTNPLTAWLTFASLIGYALIYTAYLKRATPQNIVIGGLAGAMPPLLGWTAVTNQFHGHALLLVIIIFLWTPPHF 191 The following BLAST results are available for this feature:
BLAST of FC925041 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 479
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925041 ID=FC925041; Name=FC925041; organism=Citrus clementina; type=EST; length=851bpback to top |