FC925043

Overview
NameFC925043
Unique NameFC925043
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: FLS_MATIN (Flavonol synthase/flavanone 3-hydroxylase (Fragment) OS=Matthiola incana PE=2 SV=1)

HSP 1 Score: 82.0333 bits (201), Expect = 1.490e-17
Identity = 49/167 (29.34%), Postives = 83/167 (49.70%), Query Frame = 2
Query:  131 QIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGV-QAMRMNYYP 628
            Q+PV+D+                  A ++WG FQ+VNHG+ T  +++L+K    FF L   EK+   +  G +EG+G+   +  +++    D   + T P        +PK PP  RE  E Y+  +K+L+E ++  + E L +  E ++E   NG    M +N+YP
Sbjct:    1 QVPVVDLSCPDEELVARTVVK----ASEDWGVFQVVNHGIPTELIQRLQKVGREFFELPEAEKRSCAREAGSVEGYGRRIELDIKKRKGIVDQIYLSTWPPSSVNYRYWPKSPPDYREVNEEYARHVKTLSEKIMEWLSEGLGLGREAIKEV--NGCWYVMNINHYP 161          

HSP 2 Score: 28.1054 bits (61), Expect = 1.490e-17
Identity = 10/25 (40.00%), Postives = 15/25 (60.00%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILL 701
            PP P  +   GL PH+D   LT+++
Sbjct:  161 PPYPHSDSFNGLEPHTDINGLTLII 185          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: FL3H_PETHY (Naringenin,2-oxoglutarate 3-dioxygenase (Fragment) OS=Petunia hybrida GN=AN3 PE=1 SV=1)

HSP 1 Score: 75.8702 bits (185), Expect = 2.502e-17
Identity = 44/185 (23.78%), Postives = 87/185 (47.03%), Query Frame = 2
Query:   77 YIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA-KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYP 628
            +IR + + P ++ +   ++IP+I ++              K+  AC++WG FQ+V+HG+    + ++    + FF L  EEK ++    G   GF  +  +  E   DW ++ +  + P   R    +P  P       + YS +L  LA  L+  + E + ++ E + +   +  Q + +N+YP
Sbjct:   22 FIRDEDERPKVAYNQFSNEIPIISLEGIDDETGKRAEICDKIVKACEDWGVFQVVDHGVDAEVISQMTTFAKEFFALPPEEKLRFDMSGGKKGGFIVSSHLQGEVVQDWREIVTYFSYPTRARDYSRWPDKPEGWIAVTQKYSEKLMELACKLLDVLSEAMGLEKEALTKACVDMDQKVVVNFYP 206          

HSP 2 Score: 33.4982 bits (75), Expect = 2.502e-17
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            P CP+P+  +GL  H+D   +T+LLQ
Sbjct:  206 PKCPEPDLTLGLKRHTDPGTITLLLQ 231          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: FLS_SOLTU (Flavonol synthase/flavanone 3-hydroxylase OS=Solanum tuberosum PE=2 SV=1)

HSP 1 Score: 88.1965 bits (217), Expect = 4.740e-17
Identity = 61/207 (29.47%), Postives = 97/207 (46.86%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFF-NLSMEEKKKYWQHPG--DMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREF--FENGVQAMRMNYYPSLSSAREGYGPVA 667
            +P  YIR + + P  +    ++ ++PVID+              ++  A KEWG FQ++NHG+    +E L+K  + FF  +  EEK+   + PG   +EG+G +     E K  W D       P        +PK PPS RE  E Y+  L+ +A+ +   +   L ++  EM E    E+ V  +++NYYP         G VA
Sbjct:   33 IPSEYIRSENEQPAATTLQGVVLEVPVIDISNVDDDEEKLVK--EIVEASKEWGIFQVINHGIPDEVIENLQKVGKEFFEEVPQEEKELIAKKPGAQSLEGYGTSLQKEIEGKKGWVDHLFHKIWPPSAINYRYWPKNPPSYREANEEYAKWLRKVADGIFRSLSLGLGLEGHEMMEAAGSEDIVYMLKINYYPPCPRPDLALGVVA 237          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO1_MALDO (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Malus domestica PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 9.329e-17
Identity = 43/132 (32.58%), Postives = 71/132 (53.79%), Query Frame = 2
Query:  194 KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            K++ AC+ WGFF+LVNHGMST  L+ ++K  +  +  +ME++ K       +   G   V SE   LDW   F +  LP         P L    R+T++ +++EL+ LAE L+  + E L ++   +++ F
Sbjct:   23 KINDACENWGFFELVNHGMSTELLDTVEKMTKDHYKKTMEQRFKEM-----VAAKGLDDVQSEIHDLDWESTFFLRHLP--SSNISEIPDLEEEYRKTMKEFAVELEKLAEKLLDLLCENLGLEKGYLKKVF 147          

HSP 2 Score: 35.4242 bits (80), Expect = 9.329e-17
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ + GL  HSDA  + +L Q
Sbjct:  163 PPCPKPDLIKGLRAHSDAGGIILLFQ 188          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: GAO1D_WHEAT (Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN=GA20ox1D PE=1 SV=1)

HSP 1 Score: 87.0409 bits (214), Expect = 1.056e-16
Identity = 60/208 (28.85%), Postives = 94/208 (45.19%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVH--LRKPHLFPKLPPSLRETLEVYS---MELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYPSLSSARE--GYGP 661
            +P ++I P+ +SP   D      +P+ID+                 +  AC+  GFFQ+VNHG+    L    + V+ FF + + EK++  +HPG+  G+  +F      KL W +  S  + P    L   ++   L    R   EVY+    E+  L+  ++  +GE L +     R FFE     MR+NYYP      E  G GP
Sbjct:   17 IPSQFIWPEGESPT-PDAAEELHVPLIDIGGMLSGDPAAAAEVTRLVGEACERHGFFQVVNHGIDAELLADAHRCVDNFFTMPLPEKQRALRHPGESCGYASSFTGRFASKLPWKETLSFRSCPSDPALVVDYIVATLGEDHRRLGEVYARYCSEMSRLSLEIMEVLGESLGVGRAHYRRFFEGNDSIMRLNYYPPCQRPLETLGTGP 223          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: FLS_PETHY (Flavonol synthase/flavanone 3-hydroxylase OS=Petunia hybrida GN=FL PE=2 SV=1)

HSP 1 Score: 86.2705 bits (212), Expect = 1.801e-16
Identity = 60/207 (28.99%), Postives = 95/207 (45.89%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFF-NLSMEEKKKYWQHPG--DMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF--ENGVQAMRMNYYPSLSSAREGYGPVA 667
            +P  YIR + + P  +    ++ Q+PVID++              +  A KEWG FQL+NHG+    +  L+K  + FF ++  EEK+   + PG  D+EG+G +     E K  W D       P        +PK PPS RE  E Y   ++ + + +   +   L ++  EM E    +  V  +++NYYP         G VA
Sbjct:   31 IPSEYIRSENEQPAATTLHGVVLQVPVIDLRDPDENKMVKL----IADASKEWGIFQLINHGIPDEAIADLQKVGKEFFEHVPQEEKELIAKTPGSNDIEGYGTSLQKEVEGKKGWVDHLFHKIWPPSAVNYRYWPKNPPSYREANEEYGKRMREVVDRIFKSLSLGLGLEGHEMIEAAGGDEIVYLLKINYYPPCPRPDLALGVVA 233          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSJ (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. japonica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.038e-16
Identity = 48/195 (24.62%), Postives = 78/195 (40.00%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSM-----LTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYP 628
            +P+ ++ P+ D+   S   L   +  + +             A++  AC   GFFQ+  HG+  A           FF L + EK++  + PG + G+  A       KL W +  S         PV        L P   P +    + Y  E+K L+  ++  +   L ++    REFF +    MR NYYP
Sbjct:   42 IPEPFVWPNGDARPASAAELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAP-MGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYP 235          

HSP 2 Score: 43.5134 bits (101), Expect = 2.038e-16
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+PE+ +G  PH D  ALTILLQ
Sbjct:  235 PPCPEPERTLGTGPHCDPTALTILLQ 260          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: GAOX2_ORYSI (Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. indica GN=20ox2 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 2.038e-16
Identity = 48/195 (24.62%), Postives = 78/195 (40.00%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSM-----LTLPV--HLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYP 628
            +P+ ++ P+ D+   S   L   +  + +             A++  AC   GFFQ+  HG+  A           FF L + EK++  + PG + G+  A       KL W +  S         PV        L P   P +    + Y  E+K L+  ++  +   L ++    REFF +    MR NYYP
Sbjct:   42 IPEPFVWPNGDARPASAAELDMPVVDVGVLRDGDAEGLRRAAAQVAAACATHGFFQVSEHGVDAALARAALDGASDFFRLPLAEKRRARRVPGTVSGYTSAHADRFASKLPWKETLSFGFHDRAAAPVVADYFSSTLGPDFAP-MGRVYQKYCEEMKELSLTIMELLELSLGVERGYYREFFADSSSIMRCNYYP 235          

HSP 2 Score: 43.5134 bits (101), Expect = 2.038e-16
Identity = 17/26 (65.38%), Postives = 20/26 (76.92%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+PE+ +G  PH D  ALTILLQ
Sbjct:  235 PPCPEPERTLGTGPHCDPTALTILLQ 260          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: GAOX3_ARATH (Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana GN=20ox3 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 2.039e-16
Identity = 49/198 (24.75%), Postives = 89/198 (44.95%), Query Frame = 2
Query:   65 VPDRYIRPDQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXAK--LDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLP---VHLR--KPHLFPKLPPSLRE---TLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYP 628
            +P +++ PD + P  S D    Q+P+ID+             A   +  A  + GFF + NHG+  + L +    ++ FF     EK+K  +  G+  G+  +FV     KL W +  S    P   +H +  K  +  K+     +     + Y+  + +L+  ++  +G  L ++    +EFFE+     R+NYYP
Sbjct:   37 IPQQFVWPDHEKP--STDVQPLQVPLIDLAGFLSGDSCLASEATRLVSKAATKHGFFLITNHGVDESLLSRAYLHMDSFFKAPACEKQKAQRKWGESSGYASSFVGRFSSKLPWKETLSFKFSPEEKIHSQTVKDFVSKKMGDGYEDFGKVYQEYAEAMNTLSLKIMELLGMSLGVERRYFKEFFEDSDSIFRLNYYP 232          

HSP 2 Score: 33.113 bits (74), Expect = 2.039e-16
Identity = 14/26 (53.85%), Postives = 16/26 (61.54%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            P C QPE  +G  PH D  +LTIL Q
Sbjct:  232 PQCKQPELALGTGPHCDPTSLTILHQ 257          
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCH3_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 4 OS=Arabidopsis thaliana GN=At1g06650 PE=2 SV=1)

HSP 1 Score: 68.9366 bits (167), Expect = 4.481e-16
Identity = 56/206 (27.18%), Postives = 89/206 (43.20%), Query Frame = 2
Query:   32 VQELVKNPALVVPDRYIRP----DQDSPLISDDTLISQIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEG-FGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRMNYYP 628
            V+ LV +    VP  +  P        PL SD   +  IP ID+             A  ++  A  +WGFFQ++NHG+S   LEK+KK V  F   S E +K+++         +   F +      +W D FS  T+     KP     LP   R+ +  YS ++ +L + L   + E L ++   + +   +    M  +YYP
Sbjct:   26 VKGLVDSGVSQVPRIFHHPTVKLSTPKPLPSDLLHLKTIPTIDLGGRDFQDAIKRNNAIEEIKEAAAKWGFFQVINHGVSLELLEKMKKGVRDFHEQSQEVRKEFYSRDFSRRFLYLSNFDLFSSPAANWRDTFS-CTMAPDTPKPQ---DLPEICRDIMMEYSKQVMNLGKFLFELLSEALGLEPNHLNDMDCSKGLLMLSHYYP 227          

HSP 2 Score: 36.1946 bits (82), Expect = 4.481e-16
Identity = 14/25 (56.00%), Postives = 18/25 (72.00%), Query Frame = 3
Query:  627 PPCPQPEKVMGLSPHSDAPALTILL 701
            PPCP+P+  +G S HSD   LT+LL
Sbjct:  227 PPCPEPDLTLGTSQHSDNSFLTVLL 251          
The following BLAST results are available for this feature:
BLAST of FC925043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
FLS_MATIN1.490e-1729.34Flavonol synthase/flavanone 3-hydroxylase (Fragmen... [more]
FL3H_PETHY2.502e-1723.78Naringenin,2-oxoglutarate 3-dioxygenase (Fragment)... [more]
FLS_SOLTU4.740e-1729.47Flavonol synthase/flavanone 3-hydroxylase OS=Solan... [more]
ACCO1_MALDO9.329e-1732.581-aminocyclopropane-1-carboxylate oxidase 1 OS=Mal... [more]
GAO1D_WHEAT1.056e-1628.85Gibberellin 20 oxidase 1-D OS=Triticum aestivum GN... [more]
FLS_PETHY1.801e-1628.99Flavonol synthase/flavanone 3-hydroxylase OS=Petun... [more]
GAOX2_ORYSJ2.038e-1624.62Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. ja... [more]
GAOX2_ORYSI2.038e-1624.62Gibberellin 20 oxidase 2 OS=Oryza sativa subsp. in... [more]
GAOX3_ARATH2.039e-1624.75Gibberellin 20 oxidase 3 OS=Arabidopsis thaliana G... [more]
ACCH3_ARATH4.481e-1627.181-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YA03FM1 TF Citrus clementina cDNA clone KN0AAP3YA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925043 ID=FC925043; Name=FC925043; organism=Citrus clementina; type=EST; length=709bp
CCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGTCAAGA
ATCCTGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCA
CCACTCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACAT
GCAAAGCTTACTTTCTGAAGAATCAATGGATTCTGAGCTAGCCAAGCTCG
ACTTCGCATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATG
AGCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAA
TCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCATCCAGGAGATATGG
AAGGCTTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGG
GCTGACCTTTTCTCCATGCTGACTCTTCCAGTTCATCTGAGGAAGCCACA
CTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACT
CAATGGAATTAAAATCCCTAGCCGAGAACCTAATATCGAAAATGGGAGAA
GTGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGAGT
GCAAGCAATGAGGATGAATTATTACCCCTCCCTGTCCTCAGCCCGAGAAG
GTTATGGGCCTGTCGCCACATTCCGATGCACCTGCCCTTACCATTCTGCT
ACAACTTAA
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