FC925043

Overview
NameFC925043
Unique NameFC925043
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length709
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig1932 contig Ccv1_Contig1932:1..709. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO1_PETHY (1-aminocyclopropane-1-carboxylate oxidase 1 OS=Petunia hybrida GN=ACO1 PE=1 SV=1)

HSP 1 Score: 62.7734 bits (151), Expect = 1.101e-13
Identity = 37/128 (28.91%), Postives = 63/128 (49.22%), Query Frame = 2 
Query:  206 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            AC+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V +E   +DW   F +  LP+        P L    RE +  ++  L+ LAE L+  + E L ++   ++  F
Sbjct:   27 ACENWGFFELVNHGIPREVMDTVEKMTKGHYKKCMEQRFKELVASKALEG-----VQAEVTDMDWESTFFLKHLPI--SNISEVPDLDEEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKNAF 147

HSP 2 Score: 34.2686 bits (77), Expect = 1.101e-13
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ + GL  H+DA  + +L Q
Sbjct:  163 PPCPKPDLIKGLRAHTDAGGIILLFQ 188
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO_PEA (1-aminocyclopropane-1-carboxylate oxidase OS=Pisum sativum GN=ACO PE=2 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 1.101e-13
Identity = 37/128 (28.91%), Postives = 65/128 (50.78%), Query Frame = 2 
Query:  206 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            AC+ WGFF+ VNHG+S   ++ ++K  +  +   ME++ K       +E      V SE   LDW   F +  LPV        P L    R+ ++ ++++L+ LAE L+  + E L ++   +++ F
Sbjct:   27 ACENWGFFECVNHGISIEMMDTVEKLTKEHYKKCMEQRFKEMVATKGLE-----CVQSEIDDLDWESTFFLRHLPVSSISE--IPDLDDDYRKVMKEFALKLEELAEELLDLLCENLGLEKGYLKKAF 147

HSP 2 Score: 35.4242 bits (80), Expect = 1.101e-13
Identity = 13/26 (50.00%), Postives = 18/26 (69.23%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+PE + GL  H+DA  + +L Q
Sbjct:  163 PPCPKPELIKGLRAHTDAGGIILLFQ 188
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO_TOBAC (1-aminocyclopropane-1-carboxylate oxidase OS=Nicotiana tabacum GN=ACO PE=2 SV=1)

HSP 1 Score: 62.003 bits (149), Expect = 1.858e-13
Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 2 
Query:  206 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            AC+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F
Sbjct:   27 ACENWGFFELVNHGIPHEVMDTVEKMTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPV--SNICEVPDLDDQYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKIF 147

HSP 2 Score: 34.2686 bits (77), Expect = 1.858e-13
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ + GL  H+DA  + +L Q
Sbjct:  163 PPCPKPDLIKGLRAHTDAGGIILLFQ 188
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO_PRUMU (1-aminocyclopropane-1-carboxylate oxidase OS=Prunus mume GN=ACO1 PE=2 SV=1)

HSP 1 Score: 60.4622 bits (145), Expect = 1.858e-13
Identity = 36/134 (26.87%), Postives = 70/134 (52.24%), Query Frame = 2 
Query:  194 KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHL--FPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            K+  AC+ WGFF+LV+HG+ T FL+ +++  +  +   +E++ K       +E      V +E   +DW   F +     HL K ++   P L    R  ++ ++++L+ LAE L+  + E L ++   +++ F
Sbjct:   23 KIKDACENWGFFELVSHGIPTEFLDTVERLTKEHYRQCLEQRFKELVASKGLEA-----VKTEVNDMDWESTFYLR----HLPKSNISEVPDLEDQYRNVMKEFALKLEKLAEQLLDLLCENLGLEKGYLKKAF 147

HSP 2 Score: 35.8094 bits (81), Expect = 1.858e-13
Identity = 14/26 (53.85%), Postives = 17/26 (65.38%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP PE + GL  H+DA  L +L Q
Sbjct:  163 PPCPNPELIKGLRAHTDAGGLILLFQ 188
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: FLS_MALDO (Flavonol synthase/flavanone 3-hydroxylase OS=Malus domestica GN=FLS PE=2 SV=1)

HSP 1 Score: 76.2554 bits (186), Expect = 1.864e-13
Identity = 54/210 (25.71%), Postives = 94/210 (44.76%), Query Frame = 2 
Query:   65 VPDRYIRPDQDSPLISD-DTLISQIPVIDMQXXXXXXXXXXXXAKLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHP--GDMEGFG----QAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF--ENGVQAMRMNYYPSLSSAREGYGPVA 667
            +P  +IR + + P I+     + ++P+ID               ++  A   WG +Q+VNH + +  + KL+   + FF L  EEK+ Y + P    +EG+G    +     +  K  W D       P  +     +PK PPS RE  E Y+  L ++ E L   +   L ++ +E+++    +N    +++NYYP         G VA
Sbjct:   17 IPAEFIRSENEQPGITTVHGKVLEVPIIDFSDPDEEKLI----VQITEASSNWGMYQIVNHDIPSEVISKLQAVGKEFFELPQEEKEAYAKPPDSASIEGYGTKLFKEISEGDTTKKGWVDNLFNKIWPPSVVNYQFWPKNPPSYREANEEYAKHLHNVVEKLFRLLSLGLGLEGQELKKAAGGDNLEYLLKINYYPPCPRPDLALGVVA 222
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO4_PETHY (1-aminocyclopropane-1-carboxylate oxidase 4 OS=Petunia hybrida GN=ACO4 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.413e-13
Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 2 
Query:  206 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            AC+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F
Sbjct:   27 ACENWGFFELVNHGIPHEVMDTVEKFTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPV--SNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAF 147

HSP 2 Score: 34.2686 bits (77), Expect = 2.413e-13
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ + GL  H+DA  + +L Q
Sbjct:  163 PPCPKPDLIKGLRAHTDAGGIILLFQ 188
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO3_PETHY (1-aminocyclopropane-1-carboxylate oxidase 3 OS=Petunia hybrida GN=ACO3 PE=3 SV=1)

HSP 1 Score: 61.6178 bits (148), Expect = 2.413e-13
Identity = 38/128 (29.69%), Postives = 63/128 (49.22%), Query Frame = 2 
Query:  206 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            AC+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +E      V +E   LDW   F +  LPV        P L    RE +  ++  L+ LAE L+  + E L ++   +++ F
Sbjct:   27 ACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVASKGLEA-----VQAEVTDLDWESTFFLRHLPV--SNISEVPDLDDEYREVMRDFAKRLEKLAEELLDLLCENLGLEKGYLKKAF 147

HSP 2 Score: 34.2686 bits (77), Expect = 2.413e-13
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ + GL  H+DA  + +L Q
Sbjct:  163 PPCPKPDLIKGLRAHTDAGGIILLFQ 188
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: G3OX3_ARATH (Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis thaliana GN=At4g21690 PE=2 SV=1)

HSP 1 Score: 58.5362 bits (140), Expect = 3.126e-13
Identity = 32/124 (25.81%), Postives = 59/124 (47.58%), Query Frame = 2 
Query:  206 ACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEM 577
            AC+EWG F + +HG+S + L  +  +++  F+L M  K    + P +  G+G   +     KL W++ FS++   +      L+P         +E Y   +  L+  LIS +   L +  E++
Sbjct:   64 ACEEWGVFHITDHGVSHSLLHNVDCQMKRLFSLPMHRKILAVRSPDESTGYGVVRISMFYDKLMWSEGFSVMGSSLRRHATLLWPDDHAEFCNVMEEYQKAMDDLSHRLISMLMGSLGLTHEDL 187

HSP 2 Score: 36.965 bits (84), Expect = 3.126e-13
Identity = 15/26 (57.69%), Postives = 18/26 (69.23%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            P CP P   MGL+PH+D+  LTIL Q
Sbjct:  212 PVCPDPHLAMGLAPHTDSSLLTILYQ 237
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCO2_SOLLC (1-aminocyclopropane-1-carboxylate oxidase 2 OS=Solanum lycopersicum GN=ACO2 PE=2 SV=1)

HSP 1 Score: 61.2326 bits (147), Expect = 3.136e-13
Identity = 38/132 (28.79%), Postives = 63/132 (47.73%), Query Frame = 2 
Query:  194 KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKLDWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFF 589
            K++ AC+ WGFF+LVNHG+    ++ ++K  +G +   ME++ K       +EG     V  E   +DW   F +  LP         P L    RE +  +   L+ LAE L+  + E L ++   ++  F
Sbjct:   23 KINDACENWGFFELVNHGIPHEVMDTVEKLTKGHYKKCMEQRFKELVAKKGLEG-----VEVEVTDMDWESTFFLRHLP--SSNISQLPDLDDVYREVMRDFRKRLEKLAEELLDLLCENLGLEKSYLKNTF 147

HSP 2 Score: 34.2686 bits (77), Expect = 3.136e-13
Identity = 12/26 (46.15%), Postives = 18/26 (69.23%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILLQ 704
            PPCP+P+ + GL  H+DA  + +L Q
Sbjct:  163 PPCPKPDLIKGLRAHTDAGGIILLFQ 188
[Close]
BLAST of FC925043 vs. ExPASy Swiss-Prot
Match: ACCH2_ARATH (1-aminocyclopropane-1-carboxylate oxidase homolog 2 OS=Arabidopsis thaliana GN=At1g06640 PE=2 SV=1)

HSP 1 Score: 58.9214 bits (141), Expect = 4.054e-13
Identity = 50/186 (26.88%), Postives = 77/186 (41.40%), Query Frame = 2 
Query:  101 PLISDDTLISQIPVIDMQXXXXXXXXXXXXA--KLDFACKEWGFFQLVNHGMSTAFLEKLKKEVEGFFNLSMEEKKKYWQHPGDMEGFGQAFVVSEEQKL------DWADLFSMLTLPVHLRKPHLFPKLPPSLRETLEVYSMELKSLAENLISKMGEVLNIKDEEMREFFENGVQAMRM--NYYP 628
            PL SD   +  IP ID+             A   +  A  +WGFFQ++NHG+S   LEK+K  V  F     E +K  +        FG+ F+      L      +W D F     P     P     LP   R+ +  YS ++  L E L   + E L +    +++     ++ +RM  +Y+P
Sbjct:   53 PLPSDLLHLKTIPTIDLGGRDFQDAIKHKNAIEGIKEAAAKWGFFQVINHGVSLELLEKMKDGVRDFHEQPPEVRKDLYS-----RDFGRKFIYLSNFDLYTAAAANWRDTFYCYMAP----DPPEPQDLPEICRDVMMEYSKQVMILGEFLFELLSEALGLNPNHLKDM--ECLKGLRMLCHYFP 227

HSP 2 Score: 36.1946 bits (82), Expect = 4.054e-13
Identity = 14/25 (56.00%), Postives = 17/25 (68.00%), Query Frame = 3 
Query:  627 PPCPQPEKVMGLSPHSDAPALTILL 701
            PPCP+P+   G S HSD   LT+LL
Sbjct:  227 PPCPEPDLTFGTSKHSDGSFLTVLL 251
The following BLAST results are available for this feature:
BLAST of FC925043 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 62
Match NameE-valueIdentityDescription
ACCO1_PETHY1.101e-1328.911-aminocyclopropane-1-carboxylate oxidase 1 OS=Pet... [more]
ACCO_PEA1.101e-1328.911-aminocyclopropane-1-carboxylate oxidase OS=Pisum... [more]
ACCO_TOBAC1.858e-1329.691-aminocyclopropane-1-carboxylate oxidase OS=Nicot... [more]
ACCO_PRUMU1.858e-1326.871-aminocyclopropane-1-carboxylate oxidase OS=Prunu... [more]
FLS_MALDO1.864e-1325.71Flavonol synthase/flavanone 3-hydroxylase OS=Malus... [more]
ACCO4_PETHY2.413e-1329.691-aminocyclopropane-1-carboxylate oxidase 4 OS=Pet... [more]
ACCO3_PETHY2.413e-1329.691-aminocyclopropane-1-carboxylate oxidase 3 OS=Pet... [more]
G3OX3_ARATH3.126e-1325.81Gibberellin 3-beta-dioxygenase 3 OS=Arabidopsis th... [more]
ACCO2_SOLLC3.136e-1328.791-aminocyclopropane-1-carboxylate oxidase 2 OS=Sol... [more]
ACCH2_ARATH4.054e-1326.881-aminocyclopropane-1-carboxylate oxidase homolog ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YA03FM1 TF Citrus clementina cDNA clone KN0AAP3YA03, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925043 ID=FC925043; Name=FC925043; organism=Citrus clementina; type=EST; length=709bp
CCAGATTGGAAGTTCTCTCCTTGTGCCTTGTGTTCAAGAGTTGGTCAAGA
ATCCTGCGTTAGTTGTCCCCGACAGATACATACGTCCAGATCAAGATTCA
CCACTCATTTCTGATGATACTTTGATTTCACAGATACCAGTTATTGACAT
GCAAAGCTTACTTTCTGAAGAATCAATGGATTCTGAGCTAGCCAAGCTCG
ACTTCGCATGCAAAGAATGGGGTTTTTTCCAGCTGGTAAATCATGGAATG
AGCACAGCATTTCTAGAGAAATTAAAGAAAGAGGTTGAGGGATTCTTCAA
TCTCAGCATGGAAGAAAAGAAAAAATATTGGCAGCATCCAGGAGATATGG
AAGGCTTTGGACAAGCCTTTGTTGTATCTGAGGAACAAAAGCTTGATTGG
GCTGACCTTTTCTCCATGCTGACTCTTCCAGTTCATCTGAGGAAGCCACA
CTTATTTCCTAAGCTCCCTCCTTCCCTCAGAGAGACCTTGGAAGTTTACT
CAATGGAATTAAAATCCCTAGCCGAGAACCTAATATCGAAAATGGGAGAA
GTGTTAAATATCAAAGATGAAGAAATGAGAGAATTCTTTGAAAATGGAGT
GCAAGCAATGAGGATGAATTATTACCCCTCCCTGTCCTCAGCCCGAGAAG
GTTATGGGCCTGTCGCCACATTCCGATGCACCTGCCCTTACCATTCTGCT
ACAACTTAA
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