FC925044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_SALG2 (Triosephosphate isomerase OS=Salmonella gallinarum (strain 287/91 / NCTC 13346) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 106/247 (42.91%), Postives = 142/247 (57.49%), Query Frame = 1 Query: 58 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVK-SSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSAE 786 V GNWK NG+ V ++V+ L + + ++ L K ++ + AQN + GAFTGE SAEML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A +IA I YGGSVN +N EL AQPD+DG LVGGASL + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_SALEP (Triosephosphate isomerase OS=Salmonella enteritidis PT4 (strain P125109) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 106/247 (42.91%), Postives = 142/247 (57.49%), Query Frame = 1 Query: 58 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVK-SSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSAE 786 V GNWK NG+ V ++V+ L + + ++ L K ++ + AQN + GAFTGE SAEML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A +IA I YGGSVN +N EL AQPD+DG LVGGASL + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_SALDC (Triosephosphate isomerase OS=Salmonella dublin (strain CT_02021853) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 106/247 (42.91%), Postives = 142/247 (57.49%), Query Frame = 1 Query: 58 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVK-SSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSAE 786 V GNWK NG+ V ++V+ L + + ++ L K ++ + AQN + GAFTGE SAEML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A +IA I YGGSVN +N EL AQPD+DG LVGGASL + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELAGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_SALCH (Triosephosphate isomerase OS=Salmonella choleraesuis GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 106/247 (42.91%), Postives = 142/247 (57.49%), Query Frame = 1 Query: 58 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVK-SSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSAE 786 V GNWK NG+ V ++V+ L + + ++ L K ++ + AQN + GAFTGE SAEML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A +IA I YGGSVN +N EL AQPD+DG LVGGASL + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_SALA4 (Triosephosphate isomerase OS=Salmonella agona (strain SL483) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 106/247 (42.91%), Postives = 142/247 (57.49%), Query Frame = 1 Query: 58 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVK-SSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAI--ADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDIIKSAE 786 V GNWK NG+ V ++V+ L + + ++ L K ++ + AQN + GAFTGE SAEML ++ ++I+GHSERR ES+E + K A QGL + C+GET + EAG T +V A Q A+ +++ V+AYEPVWAIGTGK ATP QAQ VH +R + A +IA I YGGSVN +N EL AQPD+DG LVGGASL + F I+K+AE Sbjct: 6 VMGNWKLNGSRHMVNELVANLRK-ELTGVAGCDVAIAPPEMYIDLAKRAAAGSHIMLGAQNVDLNLSGAFTGETSAEMLKDIGAQYIIIGHSERRTYHKESDELIAKKFAVLKEQGLTPVLCIGETEAENEAGKTEEVCARQIDAVLKTQGAAAFEGAVIAYEPVWAIGTGKSATPAQAQAVHKFIRDHI-AKADAKIAEQVIIQYGGSVNASNAAELFAQPDIDGALVGGASLKADAFAVIVKAAE 250
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_RHOBA (Triosephosphate isomerase OS=Rhodopirellula baltica GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 101/251 (40.24%), Postives = 141/251 (56.18%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIKSA 783 M R+ + GNWK N E + + + G+ + + + AQN + + GAFTGE++A ML ++ +VILGHSERR ++ E++ V K+ AL+ L I CVGETLEQREA T V+ Q + + + +NIV+AYEPVWAIGTGK A+ QA+ VH +R+ L S E+A RI YGGSV N +EL +QP++DG LVGG+SL +F IIK+A Sbjct: 1 MSRRILIAGNWKMNMRAESGASLAKGIVDAVGKSPAVEVVLCPPSVYLSGVADAVVGTPVELGAQNLYAAEDGAFTGEVNASMLTDVGCRFVILGHSERRQLMGETDACVAKKLHAALAGNLVPIVCVGETLEQREADDTESVIETQIRGSLEGLDEARAANIVIAYEPVWAIGTGKTASKEQAEAVHAFIRELLGKMFSTEVAEQIRIQYGGSVKPGNAEELLSQPNIDGALVGGSSLKVDDFAGIIKAA 251
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_PSEPF (Triosephosphate isomerase OS=Pseudomonas fluorescens (strain Pf0-1) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 109/251 (43.43%), Postives = 146/251 (58.17%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLR-PDFHVAAQNCWVKK-GGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIKSA 783 R+ V GNWK +GT V ++++ L ++ V L+ V AQN V+ GA TGEI+ LV+ V++GHSERR I+ E + + K A A + GL + CVGETLEQREAG T++VV Q +I + V +++N V+AYEPVWAIGTG ATP QAQ+VH +R+ L A S E+A R++YGGSV AN EL PD+DG L+GGASLN EF I ++A Sbjct: 2 RRPMVAGNWKMHGTRASVAELINGLRH--LALPSGVDVAVFPPCLYINQVIDGLKGKSISVGAQNSAVESMQGALTGEIAPSQLVDAGCSLVLVGHSERRQIMGERDGMLNRKFAAAQACGLIPVLCVGETLEQREAGKTLEVVGRQLGSIIEELGVGAFANAVIAYEPVWAIGTGLTATPQQAQDVHKAIREQLAAENS-EVARGVRLLYGGSVKAANAVELFGMPDIDGGLIGGASLNADEFGAICRAA 249
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAE (Triosephosphate isomerase OS=Pseudomonas aeruginosa GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 111/251 (44.22%), Postives = 144/251 (57.37%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPD-FHVAAQNCWVKK-GGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIKSA 783 R+ V GNWK +GT V +++ L Q F+ V L V AQN V+ GA TGE + L ++ V++GHSERRLIL ES+E V K A A S GL + CVGET +REAG T++VVA Q ++ D V +++ V+AYEPVWAIGTG A+P QAQEVH +R L A + E+A R++YGGSV A+ EL PD+DG LVGGASLN EF I ++A Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGSVKAASAAELFGMPDIDGGLVGGASLNADEFGAICRAA 249
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_PSEAB (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain UCBPP-PA14) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 111/251 (44.22%), Postives = 144/251 (57.37%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPD-FHVAAQNCWVKK-GGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIKSA 783 R+ V GNWK +GT V +++ L Q F+ V L V AQN V+ GA TGE + L ++ V++GHSERRLIL ES+E V K A A S GL + CVGET +REAG T++VVA Q ++ D V +++ V+AYEPVWAIGTG A+P QAQEVH +R L A + E+A R++YGGSV A+ EL PD+DG LVGGASLN EF I ++A Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGSVKAASAAELFGMPDIDGGLVGGASLNADEFGAICRAA 249
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_PSEA8 (Triosephosphate isomerase OS=Pseudomonas aeruginosa (strain LESB58) GN=tpiA PE=3 SV=1) HSP 1 Score: 174.481 bits (441), Expect = 5.960e-43 Identity = 111/251 (44.22%), Postives = 144/251 (57.37%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPD-FHVAAQNCWVKK-GGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADR--VSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIKSA 783 R+ V GNWK +GT V +++ L Q F+ V L V AQN V+ GA TGE + L ++ V++GHSERRLIL ES+E V K A A S GL + CVGET +REAG T++VVA Q ++ D V +++ V+AYEPVWAIGTG A+P QAQEVH +R L A + E+A R++YGGSV A+ EL PD+DG LVGGASLN EF I ++A Sbjct: 2 RRPLVAGNWKMHGTHSSVAELIKGLR--QLALPSGVDVAVMPPCLFISQVIQGLAGKAIDVGAQNSAVEPMQGALTGETAPSQLADVGCSMVLVGHSERRLILGESDEVVSRKFAAAQSCGLVPVLCVGETRAEREAGKTLEVVARQLGSVIDELGVGAFARAVVAYEPVWAIGTGLTASPAQAQEVHAAIRAQLAAENA-EVAKGVRLLYGGSVKAASAAELFGMPDIDGGLVGGASLNADEFGAICRAA 249 The following BLAST results are available for this feature:
BLAST of FC925044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925044 ID=FC925044; Name=FC925044; organism=Citrus clementina; type=EST; length=788bpback to top |