FC925044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_STRMU (Triosephosphate isomerase OS=Streptococcus mutans GN=tpiA PE=3 SV=2) HSP 1 Score: 147.132 bits (370), Expect = 1.019e-34 Identity = 91/252 (36.11%), Postives = 128/252 (50.79%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE----FIDIIK 777 M RK + GNWK N T E ++ + + G+ K + VAAQNC+ + GAFTGE S L L + +VI+GHSERR +E+++ + K + I C GE+LE EAG T + + Q A +S+ S++V+AYEP+WAIGTGK A A ++ +R + E+A A RI YGGSV N E A+ +VDG LVGGASL + +D +K Sbjct: 1 MSRKPIIAGNWKMNKTAAEAREFIDAVKNNIPSNNLVDTVIGSPALFLEGMKKGVKGTELQVAAQNCYWEDFGAFTGETSPAALAALGVDYVIIGHSERRDYFHETDQEINKKAHAIFKHKMTPILCCGESLETYEAGKTAEWIEGQITADLKGLSAEQVSSMVIAYEPIWAIGTGKSADANIADDICGVVRATVEKLYGKEVAQAVRIQYGGSVKPENVAEYMAKENVDGALVGGASLQADSFLALLDFVK 252
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_MYCA9 (Triosephosphate isomerase OS=Mycobacterium abscessus (strain ATCC 19977 / DSM 44196) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.019e-34 Identity = 94/249 (37.75%), Postives = 127/249 (51.00%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWS-----NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 M RK + GNWK N E V+KI L + + + + AQ+ V GA+TGE+S L L + +V++GHSERR E + V K A AL GL I C+GE L+ REAG D V ++ ++ S +V+AYEPVWAIGTG+VA+ AQEV +R L + ++A + R++YGGS N N E+ AQ DVDG LVGGASL+ E Sbjct: 1 MSRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDKVDVTVIPPFTDIRSVQTLVDGDKLRLTYGAQDLSVYDSGAYTGEVSGAFLAKLGVTYVVVGHSERRQYHGEDDALVAAKAAAALKHGLTPIVCIGEALDIREAG---DHVQYNVNSLRGSLAGLSAEQVGKVVIAYEPVWAIGTGRVASAADAQEVCAAIRAELAQIANADVAGSVRVLYGGSANAKNVGEIVAQEDVDGALVGGASLDGE 246
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_CUPTR (Triosephosphate isomerase OS=Cupriavidus taiwanensis (strain R1 / LMG 19424) GN=tpiA PE=3 SV=1) HSP 1 Score: 147.132 bits (370), Expect = 1.019e-34 Identity = 85/179 (47.49%), Postives = 108/179 (60.34%), Query Frame = 1 Query: 229 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIAD--RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 AQ+ + GAFTGE++A ML +V++GHSERR E+++ V K AL G+ + CVGETL QREAG T VV Q +A+ + V +VLAYEPVWAIGTGK AT QAQ VH LR + A + +A I+YGGSV N EL + D+DG L+GGASL E Sbjct: 62 AQDVSAEARGAFTGEVAASMLGEFGCTYVLVGHSERRTYHGETDQAVAAKALRALEFGIVPVVCVGETLAQREAGETEAVVGRQLQAVLEALTVEQLGRVVLAYEPVWAIGTGKTATSEQAQAVHAFLRGQVAARDA-GVAGRMAILYGGSVKPDNAAELFSMTDIDGGLIGGASLKSE 239
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_STRCO (Triosephosphate isomerase OS=Streptomyces coelicolor GN=tpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.331e-34 Identity = 88/186 (47.31%), Postives = 114/186 (61.29%), Query Frame = 1 Query: 229 AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-IADRVSSWS-NIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-NPEFIDIIK 777 AQ+ GGA+TGEIS ML L +V +GHSERR E++E V KV A GL I CVGE L+ REAG+ ++ AQ + + D + + ++V+AYEPVWAIGTGKV AQEV +R L S E+A RI YGGSV N E+ A+PD+DG LVGGASL + EF+ I++ Sbjct: 69 AQDISAHDGGAYTGEISGPMLAKLKCTYVAVGHSERRQYHAETDEIVNAKVKAAYKHGLTPILCVGEELDVREAGNHVEHTLAQVEGGLKDLAAEQAESVVIAYEPVWAIGTGKVCGADDAQEVCAAIRGKLAELYSQELADKVRIQYGGSVKSGNVAEIMAKPDIDGALVGGASLDSDEFVKIVR 254
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_BRASB (Triosephosphate isomerase OS=Bradyrhizobium sp. (strain BTAi1 / ATCC BAA-1182) GN=tpiA PE=3 SV=1) HSP 1 Score: 146.747 bits (369), Expect = 1.331e-34 Identity = 91/242 (37.60%), Postives = 124/242 (51.24%), Query Frame = 1 Query: 58 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLV-KSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIK 777 + GNWK NG + ++L G K+ V AQ+C K GA TG++SAEML + +I+GHSERR ES+ V K GL I CVGET +QR+AG T+D++ Q + S+ +N+ +AYEPVWAIGTG T +++H +R L + E A RI+YGGSV +N EL A +V+G LVGGASL +F+ I K Sbjct: 9 IAGNWKMNGLKASTAEFEAMLAGAAEVTGKADLLVCPPATLLAGFADKARGTRAVAVGAQDCHAKASGAHTGDLSAEMLADAGASAIIVGHSERRADHGESDVVVHQKTEAVWRAGLVAIVCVGETQQQRDAGQTLDILRGQLNLSLPQGSTAANLTVAYEPVWAIGTGLTPTAKDVEQIHAFIRTLLIERFNGE-GARMRILYGGSVKPSNAAELMAVANVNGALVGGASLKAADFLAIAK 249
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_SACEN (Triosephosphate isomerase OS=Saccharopolyspora erythraea (strain NRRL 23338) GN=tpiA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.738e-34 Identity = 100/247 (40.49%), Postives = 126/247 (51.01%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAG-----STMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN 753 M R+ + GNWK N E V+KI L E + + + AQ+ + GA+TGE+S ML L +V++GHSERR E++E V KV L G+ I CVGE LE REAG ST ++ A +++ +V+AYEPVWAIGTGKVAT AQEV LR L EIA R++YGGSV +N EL Q DVDG LVGGASLN Sbjct: 1 MARQPLIAGNWKMNLNHLEAIALVQKIAFSLPEKYFAKVEVAVIPPFTDIRSVQTLIDGDKLLLKHGAQDVSEHESGAYTGEVSGPMLAKLGCSYVVVGHSERREHHAETDEVVNRKVRAVLKHGMSPILCVGEPLEVREAGGHVEHSTTQLINALKGLKTEQIRQ---VVVAYEPVWAIGTGKVATAADAQEVCAALRTALADKYGKEIADEVRVLYGGSVKSSNIGELIGQNDVDGALVGGASLN 244
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_LACLM (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=tpiA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.738e-34 Identity = 90/245 (36.73%), Postives = 126/245 (51.43%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 M RK + GNWK N T E + V + + + +AA+N + + GAFTGE S +V+L I ++I+GHSERR +E++E + K + G I C GETLE EAG T + V+ Q +A A++V SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGSV + L A+ ++DG LVGGASL + Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGIEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLTAEQV---SNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGSVKPETIEGLMAKENIDGALVGGASLEAD 242
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_LACLA (Triosephosphate isomerase OS=Lactococcus lactis subsp. lactis GN=tpiA PE=1 SV=3) HSP 1 Score: 146.362 bits (368), Expect = 1.738e-34 Identity = 88/242 (36.36%), Postives = 125/242 (51.65%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 M RK + GNWK N T E + V + + + +AA+N + + GAFTGE S +V+L + ++I+GHSERR +E++E + K + G I C GETLE EAG T + V+ Q +A +S+ SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGSV + L A+ ++DG LVGGASL + Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGVEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLSAEQVSNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGSVKPETIEGLMAKENIDGALVGGASLEAD 242
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_CLOB1 (Triosephosphate isomerase OS=Clostridium botulinum (strain ATCC 19397 / Type A) GN=tpiA PE=3 SV=1) HSP 1 Score: 146.362 bits (368), Expect = 1.738e-34 Identity = 95/242 (39.26%), Postives = 123/242 (50.83%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 R + GNWK N T +E ++V L L VK S + V AQN ++ GA+TGEI+ +ML L + +VI+GHSERR NE++E V KV A L I C GE+LE+RE T V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + A +A RI YGGSV K A+ ++DG LVGGASL E Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVCLPAVLEEVKGS---NIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKAMYGESVADKIRIQYGGSVKPGTIKAQMAKEEIDGALVGGASLKAE 240
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_LACLS (Triosephosphate isomerase OS=Lactococcus lactis subsp. cremoris (strain SK11) GN=tpiA PE=3 SV=1) HSP 1 Score: 145.976 bits (367), Expect = 2.270e-34 Identity = 89/245 (36.33%), Postives = 126/245 (51.43%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKA-----IADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 M RK + GNWK N T E + V + + + +AA+N + + GAFTGE S +V+L + ++I+GHSERR +E++E + K + G I C GETLE EAG T + V+ Q +A A++V SN+V+AYEP+WAIGTGK AT A E +R + E++ A RI YGGSV + L A+ ++DG LVGGASL + Sbjct: 1 MSRKPIIAGNWKMNKTLSEAQAFVEAVKNNLPSSDNVESVIGAPALFLAPMAYLRQGSELKLAAENSYFENAGAFTGENSPAAIVDLGVEYIIIGHSERREYFHETDEDINKKAKAIFAAGATPILCCGETLETFEAGKTAEWVSGQIEAGLAGLTAEQV---SNLVIAYEPIWAIGTGKTATNEIADETCGVVRSTVEKLYGKEVSEAVRIQYGGSVKPETIEGLMAKENIDGALVGGASLEAD 242 The following BLAST results are available for this feature:
BLAST of FC925044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925044 ID=FC925044; Name=FC925044; organism=Citrus clementina; type=EST; length=788bpback to top |