FC925044
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_MYCLE (Triosephosphate isomerase OS=Mycobacterium leprae GN=tpiA PE=3 SV=1) HSP 1 Score: 144.821 bits (364), Expect = 5.057e-34 Identity = 93/244 (38.11%), Postives = 124/244 (50.82%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN 753 M RK + GNWK N E V+KI L + + + + AQ+ GA+TG+IS L L +V++GHSERR +E + V K A AL L I C+GE LE RE G + Q + +S N+V+ YEPVWAIGTG+VA+ AQEV +RK L A SP++A R++YGGS+N N ++ AQ DVDG LVGGASL+ Sbjct: 1 MSRKSLIAGNWKMNLNHFEAIALVQKIAFSLPDKYYDKVDVTVLPPFTDLRSVQTLVDGDKLRLTYGAQDLSQHDLGAYTGDISGAFLAKLGCSFVLVGHSERRTYHDEGDALVAAKTAAALKNSLTPIVCIGEYLEIREVGEHVSHCQNQLRGSLAGLSPEQIGNVVIVYEPVWAIGTGRVASAADAQEVCEAIRKELGALASPQVAETVRVLYGGSLNAKNIGDIVAQQDVDGGLVGGASLD 244
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS1_RHIEC (Triosephosphate isomerase 1 OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=2) HSP 1 Score: 144.821 bits (364), Expect = 5.057e-34 Identity = 93/246 (37.80%), Postives = 130/246 (52.85%), Query Frame = 1 Query: 58 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVA--AQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLN-PEFIDIIKSAE 786 V GNWK NGT + +I ++ EG L V ++L D +A AQ+C K GA TG+ISAEM+ + +VI+GHSERR E++ V K A + L I C+GET ++R AG +DV+ Q A ++ N V+AYEP+WAIGTG T ++ H +R L + E R++YGGSV AN EL +VDG L+GGASL +F+ I ++ E Sbjct: 9 VAGNWKMNGTRASLDQIKAIA-EGVRPPLADKVEALICPPTTLLYVATALCTDSPLAIGAQDCHQKPSGAHTGDISAEMIADSFGTYVIVGHSERRTDHAETDHLVRAKAEAAFAAELTAIICIGETADERRAGQELDVIKRQLSASVPDAATAENTVIAYEPIWAIGTGVTPTSGDVEKAHAFMRAELVSRFGDE-GRKMRLLYGGSVKPANAGELLGIANVDGALIGGASLKAADFLAIYRAYE 252
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_MYCGI (Triosephosphate isomerase OS=Mycobacterium gilvum (strain PYR-GCK) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.604e-34 Identity = 94/246 (38.21%), Postives = 125/246 (50.81%), Query Frame = 1 Query: 40 MGRKFFVGGNWKCNGTTEE----VKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSW--SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 M RK + GNWK N E V+KI L + + + + AQ+ GA+TGEIS L L + ++GHSERR E++E V K AL GL I C+GE LE REAG+ ++ + +S+ + V+AYEPVWAIGTG+VA+ AQEV +R L S ++AA R++YGGSVN N E+ Q DVDG LVGGASL+ E Sbjct: 1 MTRKPLIAGNWKMNLNHFEAIALVQKIAFSLPDKYFDRVDVTVIPPFTDLRSVQTLVDGDKLRLTYGAQDVSQHDSGAYTGEISGAFLAKLGCTFAVVGHSERRTYHGETDELVAAKATAALKHGLTPIVCIGEQLEVREAGNHVEFNVNSLRGSLAGLSAEQIAQTVIAYEPVWAIGTGRVASAADAQEVCKAIRDELGNLASADVAAGVRVLYGGSVNAKNVGEIVGQGDVDGALVGGASLDGE 246
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBL (Triosephosphate isomerase OS=Clostridium botulinum (strain Langeland / NCTC 10281 / Type F) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.604e-34 Identity = 94/242 (38.84%), Postives = 122/242 (50.41%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 R + GNWK N T +E ++V L L VK S + V AQN ++ GA+TGEI+ +ML L + +VI+GHSERR NE++E V KV A L I C GE+LE+RE T V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + +A RI YGGSV K A+ ++DG LVGGASL E Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVCLPAVLEEVKGS---NIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGENVADKVRIQYGGSVKPGTIKAQMAKEEIDGALVGGASLKAE 240
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS3_RHIEC (Triosephosphate isomerase (Fragment) OS=Rhizobium etli (strain CFN 42 / ATCC 51251) GN=tpiA PE=3 SV=1) HSP 1 Score: 144.436 bits (363), Expect = 6.604e-34 Identity = 81/161 (50.31%), Postives = 106/161 (65.84%), Query Frame = 1 Query: 256 GAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSS--WSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFL 732 GA+TGE+SAE+L + I +V++GHSERR ES + K AL+ GLKVI CVGE+LEQRE+G VV Q +A V++ W +IV+AYEP+WAIGTGK A+P AQ +H ++R+ L TS A I+YGGSV N ELAA PD++G L Sbjct: 68 GAYTGEVSAELLKDSQIEYVLIGHSERREYFAESAAILNAKAQNALNAGLKVIYCVGESLEQRESGQAEVVVLQQICDLASVVTAEQWPHIVIAYEPIWAIGTGKTASPEDAQTMHAKIREGLTQITSH--GANMAILYGGSVKAENAVELAACPDINGAL 226
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_MYCHR (Triosephosphate isomerase OS=Mycoplasma hyorhinis GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.127e-33 Identity = 91/246 (36.99%), Postives = 132/246 (53.66%), Query Frame = 1 Query: 49 KFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPD---FHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE-FIDII 774 K + GNWK N T + K+ S N+ + ++ + +A QN + GA+TGEISA+ML++L++ + I+GHSERR E++ V K A+ + + CVGETLE+ EA T V+ Q K V S +++AYEP+WAIGTGK ATP QAQ+V +RK N + I+YGGSV+ N ++L Q D++G LVGGASL + FI ++ Sbjct: 3 KTIIIGNWKMNKTFTQTKEFFSAFNQLYIENKNKINQNLDFAVALPAINVAAFSKNTTKLELAVQNMSQFEKGAYTGEISAQMLLDLNVKYAIIGHSERRQYFKETDLDVNAKTQQAIKNNIIPVVCVGETLEEYEAQKTSQVIEYQLKNSLKDV-DLSKVIVAYEPIWAIGTGKTATPEQAQQVCKFIRKQTNKNLT--------ILYGGSVSQENIEQLLNQADINGALVGGASLKVDSFIKLL 239
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_MYCFL (Triosephosphate isomerase OS=Mycoplasma flocculare GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.127e-33 Identity = 95/247 (38.46%), Postives = 129/247 (52.23%), Query Frame = 1 Query: 49 KFFVGGNWKCNGTTEEVKKIVSVLN----EGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNP-EFIDII 774 K + GNWK N T E + + + + L L+ +S VAAQN GAFTGEISA+ML +L + +VI+GHSERR I E E + +K+ A L + CVGE+L + EA T V+ Q + V ++ ++AYEP+WAIGTGK AT A++V K + N I R+IYGGSVN N EL Q ++DG LVG ASL+P EF+ I+ Sbjct: 2 KKIIIGNWKMNKTVHETRDFIQKFDIFYSKNLGKIKDNLDFAIAPSFTSLALISTSKIDKLKVAAQNLSQFDSGAFTGEISAKMLQDLAVHYVIIGHSERREIFKEIGEDLTNKILQAQKYNLIPVFCVGESLSEFEANETEKVIIGQINEVKS-VLNFEKAIIAYEPIWAIGTGKTATAQIAEQV----CKLIKNNFGKNI----RVIYGGSVNSKNINELLLQKNIDGALVGKASLDPEEFVKIL 239
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_ENTFA (Triosephosphate isomerase OS=Enterococcus faecalis GN=tpiA PE=3 SV=1) HSP 1 Score: 143.665 bits (361), Expect = 1.127e-33 Identity = 87/240 (36.25%), Postives = 123/240 (51.25%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIADRVSSW-SNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASLNPE 759 RK + GNWK N T E + + L + + +AAQNC+ + GAFTGE S + +L + +VI+GHSERR +E++E + K + G+ I C GETLE EAG T + + Q TK + + +++V+AYEP+WAIGTGK A A E+ +R + E++ A RI YGGSV N E A+ +VDG LVGGASL + Sbjct: 2 RKPIIAGNWKMNKTLSEAQSFAEAVKNAVPSNDVVDAVIGSPALFLAPLAWNLKDSEVKLAAQNCYWENAGAFTGENSPAAIADLGVDYVIIGHSERREYFHETDEDINKKAKAIFANGMTPIFCCGETLETYEAGKTAEWIEGQITKGLVGLSNEQVASMVIAYEPIWAIGTGKSADANIADEICGVVRSTVEKLYGKEVSEAVRIQYGGSVKPENIAEYMAKENVDGALVGGASLEAD 241
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_PHYAS (Triosephosphate isomerase OS=Phytoplasma australiense GN=tpiA PE=3 SV=1) HSP 1 Score: 143.28 bits (360), Expect = 1.471e-33 Identity = 84/245 (34.29%), Postives = 136/245 (55.51%), Query Frame = 1 Query: 58 VGGNWKCNGTTEEVKKIVSVLNEGQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQ-TKAIAD-RVSSWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL-NPEFIDIIKSA 783 + GNWK E + + +N L ++ + P+ + AQN + + GAFTGEIS LV+L + +V+LGHSERR++ E+++ V K+ AL L + C+GETLE +E T + + Q T+A+ D I++AYEPVWAIGTGK A+P +A + ++R+ + S ++ + +I+YGGSV+ N + + Q ++DG LVG ASL +F++ ++A Sbjct: 10 IAGNWKMYKDKNEALEFIQKVNFS-IPNSKEVETIIFAQSTLLDVLVQNQGPNLKIGAQNAFHESEGAFTGEISPLNLVSLGVKYVLLGHSERRVLFGETDQLVNLKLLKALQNNLSPVLCLGETLETKENNKTKEFLEKQLTQALKDVPQEDLEKILIAYEPVWAIGTGKTASPQEANQTIKQIREKVTNLYSAQVVQSLKILYGGSVSSNNVEAILEQNEIDGVLVGKASLETKDFLNFTQAA 253
BLAST of FC925044 vs. ExPASy Swiss-Prot
Match: TPIS_CLOBK (Triosephosphate isomerase OS=Clostridium botulinum (strain Okra / Type B1) GN=tpiA PE=3 SV=1) HSP 1 Score: 142.895 bits (359), Expect = 1.922e-33 Identity = 93/239 (38.91%), Postives = 121/239 (50.63%), Query Frame = 1 Query: 46 RKFFVGGNWKCNGTTEEVKKIVSVLNE--GQXXXXXXXXXXXXXXXXFLGLVKSSLRPDFHVAAQNCWVKKGGAFTGEISAEMLVNLDIPWVILGHSERRLILNESNEFVGDKVAYALSQGLKVIACVGETLEQREAGSTMDVVAAQTKAIADRVS--SWSNIVLAYEPVWAIGTGKVATPVQAQEVHFELRKWLFANTSPEIAAATRIIYGGSVNGANCKELAAQPDVDGFLVGGASL 750 R + GNWK N T +E ++V L L VK S + V AQN ++ GA+TGEI+ +ML L + +VI+GHSERR NE++E V KV A L I C GE+LE+RE T V+ Q K +S +V+AYEP+WAIGTGK AT QA E +R + +A RI YGGSV K A+ ++DG LVGGASL Sbjct: 2 RTAIIAGNWKMNKTVKEAVELVKELKPLVKDAKCDVVVCPTYVCLPAVLEEVKGS---NIKVGAQNMHFEESGAYTGEIAPKMLEELGVHYVIIGHSERRQYFNETDETVNKKVKKAFEHNLIPIVCCGESLEEREGNITEKVLEGQIKVGLKELSKEQVEKLVIAYEPIWAIGTGKTATDEQANETIGYIRTVVKDMYGESVADKVRIQYGGSVKPGTIKAQMAKEEIDGALVGGASL 237 The following BLAST results are available for this feature:
BLAST of FC925044 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925044 ID=FC925044; Name=FC925044; organism=Citrus clementina; type=EST; length=788bpback to top |