FC925051
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB2A_PYRPY (Chlorophyll a-b binding protein 1A, chloroplastic OS=Pyrus pyrifolia PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 66/204 (32.35%), Postives = 87/204 (42.65%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGAD------------PGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+ WF+AGA P I S ++ Q++LMG +E R A + YPGG F DPL LA D + +KV EIK+ RLAM +M F+ +A GK P+ Sbjct: 79 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGAQIFSEGGLDYLGSPQLIHAQSILAIWACQVILMGAIEGYR--------------------VAGGPLGEVTDPIYPGGNF-DPLGLAD---------DPDAFADVKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 252
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB29_MAIZE (Chlorophyll a-b binding protein M9, chloroplastic OS=Zea mays GN=CAB-M9 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 65/204 (31.86%), Postives = 85/204 (41.67%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG +E R A + YPGG FDPL LA D E +KV E+K+ RLAM +M F+ +A GK PL Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLIHAQSILAIWACQVVLMGAIEG--------------------YRVAGGPLGEVVDPLYPGGT-FDPLGLA---------DDPEAFADVKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 239
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB22_CUCSA (Chlorophyll a-b binding protein of LHCII type 1 (Fragment) OS=Cucumis sativus PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 65/204 (31.86%), Postives = 84/204 (41.18%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 P +L G PGDYG+D GL DP RE E+IH WAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG F DPL LA D E LKV E+K+ RLAM +M F+ +A GK PL Sbjct: 7 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHSTWAMLGALGCVFPELLSRNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEGYR--------------------IAGGPLGEVTDPIYPGGSF-DPLGLAD---------DPEAFAELKVKELKNGRLAMFSMFGFFVQAIVTGKGPL 180
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB21_GOSHI (Chlorophyll a-b binding protein 151, chloroplastic OS=Gossypium hirsutum GN=CAB-151 PE=2 SV=2) HSP 1 Score: 77.0258 bits (188), Expect = 1.383e-13 Identity = 66/204 (32.35%), Postives = 88/204 (43.14%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P I S ++ Q++LMG+VE R P + ++ YPGG F DPL LA D + LKV EIK+ RLAM +M F+ +A GK P+ Sbjct: 66 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPEILSKNGVKFGEAVWFKAGSQIFSEGGLDYLGNPNLIHAQSILAIWACQVVLMGFVEGYRVGG--GPLGEGLDPI------------------YPGGAF-DPLGLAD---------DPDAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPI 239
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB22_PETSP (Chlorophyll a-b binding protein 22L, chloroplastic OS=Petunia sp. GN=CAB22L PE=3 SV=1) HSP 1 Score: 76.6406 bits (187), Expect = 1.806e-13 Identity = 67/204 (32.84%), Postives = 86/204 (42.16%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQ--AWSGIP-----WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 P +L G PGDYG+D GL DP RE E+IH RWAM +G + A +G+ W +AG+ +P + S ++ Q+LLMG VE R A + YPGG F DPL LA D E LKV E K+ RLAM +M F+ +A GK PL Sbjct: 68 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELFARNGVKFGEAVWLKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVLLMGAVEGYR--------------------VAGGPLGVVVDPLYPGGSF-DPLGLA---------EDPEAFAELKVKETKNGRLAMFSMFGFFIQAIVTGKGPL 241
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB25_PETSP (Chlorophyll a-b binding protein 91R, chloroplastic OS=Petunia sp. GN=CAB91R PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 66/204 (32.35%), Postives = 84/204 (41.18%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 P +L G PGDYG+D L DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 68 PSYLTGEFPGDYGWDTAELSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAVWFKAGSQIFSEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVVDPLYPGGS-FDPLGLA---------DDPEAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 241
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB21_PETSP (Chlorophyll a-b binding protein 13, chloroplastic OS=Petunia sp. GN=CAB13 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 3.081e-13 Identity = 65/204 (31.86%), Postives = 85/204 (41.67%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 P +L G PGDYG+D GL DPA R+ E+IH RW M +G G + WF+AG+ +P + S ++ Q++LMG VE R A + YPGG FDPL LA D E L+V EIK+ RLAM +M F+ +A GK PL Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPATFAKNRKLEVIHCRWTMLGALGCVFPELFARNGVKFGEAVWFKAGSQIFKEGGLDYLGNPSLVHAQSILAIWACQVVLMGAVEG--------------------YRVAGGPLGEVIDPLYPGGS-FDPLGLA---------DDPEAFAELEVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB2_MALDO (Chlorophyll a-b binding protein AB10, chloroplastic OS=Malus domestica PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.864e-13 Identity = 62/196 (31.63%), Postives = 83/196 (42.35%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIF-------VGQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA 748 P +L G PGDYG+D GL P RE E+IH R AM+A +G +GQ + WF+AGA +P + S ++ T+++LMG VE R A + YPG FD L LA DTE LKV E+K+ RLAM +M F+ +A Sbjct: 70 PSYLTGEFPGDYGWDTAGLSAYPETFAKNRELEVIHSRCAMSAALGCIFPELLSVMGQGFGEAVWFKAGAQIFSEGGLDYLGNPSLVHAQSILAIWTTKVILMGAVEGYR--------------------IARGPLGEVTDPLYPGS--FDSLGLA---------EDTEAFAELKVKELKNGRLAMFSMFGFFVQA 234
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB21_WHEAT (Chlorophyll a-b binding protein, chloroplastic OS=Triticum aestivum GN=WHAB1.6 PE=3 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 6.864e-13 Identity = 66/204 (32.35%), Postives = 86/204 (42.16%), Query Frame = 2 Query: 218 PEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFV-------GQAWSGIPWFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 P +L G PGDYG+D GL DP RE E+IH RWAM +G G + WF+AG+ +P + S ++ Q++LMG VE R P + V + YPGG FDPL LA + LKV EIK+ RLAM +M F+ +A GK PL Sbjct: 67 PSYLTGEFPGDYGWDTAGLSADPETFAKNRELEVIHCRWAMLGALGCVFPELLARNGVKFGEAGWFKAGSQIFSDGGLDYLGNPSLVHAQSLLAIWACQVVLMGAVEGYRIAG--GPLGEIV------------------DPLYPGGS-FDPLGLA---------ERPQAFAELKVKEIKNGRLAMFSMFGFFVQAIVTGKGPL 240
BLAST of FC925051 vs. ExPASy Swiss-Prot
Match: CB2_DUNSA (Chlorophyll a-b binding protein of LHCII type I, chloroplastic OS=Dunaliella salina PE=2 SV=1) HSP 1 Score: 73.1738 bits (178), Expect = 1.997e-12 Identity = 66/207 (31.88%), Postives = 88/207 (42.51%), Query Frame = 2 Query: 215 NPEWLDGSLPGDYGFDPLGLGKDPAFLKWYREAELIHGRWAMAAVVGIFVGQAWS---GIP------WFEAGA------------DPGAIAPFSFGSLLGTQLLLMGWVESKRWVDFFNPESQSVEWATPWSRTAENFANATGEQGYPGGKFFDPLCLAGTIKDGVYIPDTEKLDRLKVAEIKHARLAMVAMLIFYFEA-GQGKTPL 769 +P G PGDYG+D GL DP K YRE ELIH R + +G+ + + GI WF+AGA +P I + + L Q++LMG VE R P + ++ P G+ FDPL LA D + LKV EIK+ RLAM A L F+ +A GK P+ Sbjct: 72 HPRLPTGEFPGDYGWDTAGLSADPETFKRYRELELIHARCGLLGALGMVTPELLADEDGIKFGDAAIWFKAGAAIFQDGGLNYLGNPSLIHAQNIVATLAVQVVLMGLVEGYRVNG--GPAGEGLDPLYP-------------------GEAFDPLGLA---------DDPDTFAELKVKEIKNGRLAMFACLGFFVQAIVTGKGPI 248 The following BLAST results are available for this feature:
BLAST of FC925051 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 71
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925051 ID=FC925051; Name=FC925051; organism=Citrus clementina; type=EST; length=819bpback to top |