FC925058
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925058 vs. ExPASy Swiss-Prot
Match: YKT6_SCHPO (Synaptobrevin homolog ykt6 OS=Schizosaccharomyces pombe GN=ykt6 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.434e-13 Identity = 46/156 (29.49%), Postives = 79/156 (50.64%), Query Frame = 2 Query: 215 KNLSRGQNEASRMSIETGPYVFH-YIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNG-AQIETAARPYAFIKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALI 676 K ++ N R +E YVFH Y +C + D+ YP ++A+ L + +EF N + E+ A +F + DT++ K YQD + I ++ EL E ++ + ++ VL GEKLD + + S L+++SR++ AK N +I Sbjct: 45 KTVAERTNPGQRQDVEQSNYVFHVYNRSDGLCGVIASDKEYPLRVAYTLLNKILDEFLTKNPRTKWESGAVTLSFPELDTYLSK----YQDPKQADTIMRVQQELDETKDVLHKTIESVLARGEKLDDLIQRSDNLSTQSRMFYKSAKKQNSCCII 196
BLAST of FC925058 vs. ExPASy Swiss-Prot
Match: VAMP7_CHICK (Vesicle-associated membrane protein 7 OS=Gallus gallus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.082e-13 Identity = 41/163 (25.15%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 221 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALIRKWAPVAIVL 706 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + +++ +A+ ++ E+ IM RN+ V GEKL+ + + + L S + +++L R ++ I++ Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIIYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKYHSESKGTDQVAETQAQVDELKGIMVRNIDLVAQRGEKLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIII 194
BLAST of FC925058 vs. ExPASy Swiss-Prot
Match: VAMP7_RAT (Vesicle-associated membrane protein 7 OS=Rattus norvegicus GN=Vamp7 PE=1 SV=1) HSP 1 Score: 71.633 bits (174), Expect = 4.591e-12 Identity = 40/163 (24.54%), Postives = 86/163 (52.76%), Query Frame = 2 Query: 221 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALIRKWAPVAIVL 706 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + ++ + + ++ E+ IM RN+ V GE+L+ + + + L S + +++L R ++ AI++ Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFGFLNEVKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENQSLDRVTETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCVKNVKLTAIIV 194
BLAST of FC925058 vs. ExPASy Swiss-Prot
Match: VAMP7_MOUSE (Vesicle-associated membrane protein 7 OS=Mus musculus GN=Vamp7 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.336e-11 Identity = 41/163 (25.15%), Postives = 87/163 (53.37%), Query Frame = 2 Query: 221 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALIRKWAPVAIVL 706 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + ++ + + ++ E+ IM RN+ V GE+L+ + + + L S + +++L R A+ K + I++ Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFSFLNEVKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKSLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLAR-AMCMKNIKLTIII 193
BLAST of FC925058 vs. ExPASy Swiss-Prot
Match: VAMP7_HUMAN (Vesicle-associated membrane protein 7 OS=Homo sapiens GN=VAMP7 PE=1 SV=3) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 39/163 (23.93%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 221 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALIRKWAPVAIVL 706 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + + + + ++ E+ IM RN+ V GE+L+ + + + L S + +++L R ++ I++ Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIII 194
BLAST of FC925058 vs. ExPASy Swiss-Prot
Match: VAMP7_BOVIN (Vesicle-associated membrane protein 7 OS=Bos taurus GN=VAMP7 PE=2 SV=1) HSP 1 Score: 69.707 bits (169), Expect = 1.744e-11 Identity = 39/163 (23.93%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 221 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALIRKWAPVAIVL 706 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + + + + ++ E+ IM RN+ V GE+L+ + + + L S + +++L R ++ I++ Sbjct: 33 LAKIPSENNKLTYSHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIII 194
BLAST of FC925058 vs. ExPASy Swiss-Prot
Match: VAMP7_PONAB (Vesicle-associated membrane protein 7 OS=Pongo abelii GN=VAMP7 PE=2 SV=3) HSP 1 Score: 69.3218 bits (168), Expect = 2.278e-11 Identity = 39/163 (23.93%), Postives = 84/163 (51.53%), Query Frame = 2 Query: 221 LSRGQNEASRMSIETGPYVFHYIIEGRVCYLTMCDRAYPKKLAFQYLEDLKNEFERVNGAQIETAARPYAF-IKFDTFIQKTKKLYQDTRTQRNIAKLNDELYEVHQIMTRNVQEVLGVGEKLDQVSEMSSRLTSESRIYADKAKDLNRQALIRKWAPVAIVL 706 L++ +E ++++ G Y+FHYI + R+ YL + D + + AF +L ++K F+ G++ +TA PYA +F + + K + + + + + ++ E+ IM RN+ V GE+L+ + + + L S + +++L R ++ I++ Sbjct: 33 LAKIPSENNKLTYPHGNYLFHYICQDRIVYLCITDDDFERSRAFNFLNEIKKRFQTTYGSRAQTAL-PYAMNSEFSSVLAAQLKHHSENKGLDKVMETQAQVDELKGIMVRNIDLVAQRGERLELLIDKTENLVDSSVTFKTTSRNLARAMCMKNLKLTIIII 194 The following BLAST results are available for this feature:
BLAST of FC925058 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925058 ID=FC925058; Name=FC925058; organism=Citrus clementina; type=EST; length=711bpback to top |