FC925063

Overview
NameFC925063
Unique NameFC925063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length344
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AB_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Oryctolagus cuniculus GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AB_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform (Fragment) OS=Sus scrofa GN=PPP2CB PE=2 SV=2)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  198 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 277
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AB_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Mus musculus GN=Ppp2cb PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AB_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Homo sapiens GN=PPP2CB PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AB_BOVIN (Serine/threonine-protein phosphatase 2A catalytic subunit beta isoform OS=Bos taurus GN=PPP2CB PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AA_RAT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Rattus norvegicus GN=Ppp2ca PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AA_RABIT (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Oryctolagus cuniculus GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AA_PIG (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Sus scrofa GN=PPP2CA PE=2 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AA_MOUSE (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Mus musculus GN=Ppp2ca PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
[Close]
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2AA_HUMAN (Serine/threonine-protein phosphatase 2A catalytic subunit alpha isoform OS=Homo sapiens GN=PPP2CA PE=1 SV=1)

HSP 1 Score: 68.5514 bits (166), Expect = 1.142e-11
Identity = 33/81 (40.74%), Postives = 49/81 (60.49%), Query Frame = 1 
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  TLK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNHANGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAAIMELD-DTLKYSFLQFDPAP 293
The following BLAST results are available for this feature:
BLAST of FC925063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PP2AB_RABIT1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_PIG1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_MOUSE1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_HUMAN1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AB_BOVIN1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RAT1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_RABIT1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_PIG1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_MOUSE1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]
PP2AA_HUMAN1.142e-1140.74Serine/threonine-protein phosphatase 2A catalytic ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YA20FM1 TF Citrus clementina cDNA clone KN0AAP3YA20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925063 ID=FC925063; Name=FC925063; organism=Citrus clementina; type=EST; length=344bp
CGAAGAGGGCCCTTTTAGAGAGGAGTGGGTCTTTCATTTGGTGCTGACGT
GACAAAAAGATTCCTGCAGGATAACAGTCTAGATTTATTTGTGCGATCAC
ACGAAGTTAAGGATGAAGGCTATGAGATTGAGCATGATGGCAAACTCATT
ACGGTATTTTCTGCACCAAATTACTGTGATCAGATGGGTAATAAGGGTGC
TTTTATTCGTTTTGAAGCTCCTACCTTGAAGCCAAATGTTGTTACGTTTT
CAGCTGTGCCTCACCCTGATGTCTAGCCATTGGCATATGCCTACAATTTC
CTACGAACGTTTCTTTACTATATCTCACATCGATGGAACGGCAA
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