FC925063

Overview
NameFC925063
Unique NameFC925063
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length344
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPX2_PARTE (Serine/threonine-protein phosphatase PP-X homolog 2 OS=Paramecium tetraurelia GN=Ppx2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G  FGADV K F + N + L  R+H++  EG+++  D  L+TV+SAPNYC + GN  + +  +   LK     F A P
Sbjct:  208 RGAGFVFGADVVKEFNRRNGISLICRAHQLAMEGFKLMFDNSLVTVWSAPNYCYRCGNVASILELD-ENLKKYYKLFEAAP 287          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PPX1_PARTE (Serine/threonine-protein phosphatase PP-X homolog 1 OS=Paramecium tetraurelia GN=Ppx1 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G  FGADV K F + N + L  R+H++  EG+++  D  L+TV+SAPNYC + GN  + +  +   LK     F A P
Sbjct:  208 RGAGFVFGADVVKEFNRRNGISLICRAHQLAMEGFKLMFDNSLVTVWSAPNYCYRCGNVASILELD-ENLKKYYKLFEAAP 287          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP4C1_CAEEL (Serine/threonine-protein phosphatase 4 catalytic subunit 1 OS=Caenorhabditis elegans GN=pph-4.1 PE=1 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 33/81 (40.74%), Postives = 47/81 (58.02%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G  FGAD +K F + N +DL  R+H++  EGY+   + K++TV+SAPNYC + GN  A +  +   L      F A P
Sbjct:  237 RGAGYLFGADASKTFCETNGVDLICRAHQLVMEGYKWHFNEKVLTVWSAPNYCYRCGNVAAILELD-ENLNKEFTIFEAAP 316          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2A2_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 2 OS=Paramecium tetraurelia GN=Ppn2 PE=3 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G ++G D+T++FL  N L    R+H++  EG +  H+ K IT+FSAPNYC + GN+   +  +   LK N   F   P
Sbjct:  220 RGAGWTWGCDITEKFLHSNKLKQIARAHQLVMEGIQKVHNQKTITIFSAPNYCYRCGNQACIVEVD-EQLKMNQTQFEPAP 299          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2A1_PARTE (Serine/threonine-protein phosphatase PP2A catalytic subunit 1 OS=Paramecium tetraurelia GN=Ppn1 PE=3 SV=2)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 32/81 (39.51%), Postives = 47/81 (58.02%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G ++G D+T++FL  N L    R+H++  EG +  H+ K IT+FSAPNYC + GN+   +  +   LK N   F   P
Sbjct:  220 RGAGWTWGCDITEKFLHSNKLKQIARAHQLVMEGIQKVHNQKTITIFSAPNYCYRCGNQACIVEVD-EQLKMNQTQFEPAP 299          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP1_MAIZE (Serine/threonine-protein phosphatase PP1 OS=Zea mays GN=PP1 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFI 207
            RGV  +FG D    FL+ + LDL  R+H+V ++GYE     +L+T+FSAPNYC +  N GA +
Sbjct:  218 RGVSFTFGPDKVSEFLEKHDLDLICRAHQVVEDGYEFFASRQLVTIFSAPNYCGEFDNAGAMM 280          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP13_TOBAC (Serine/threonine-protein phosphatase PP1 isozyme 3 OS=Nicotiana tabacum GN=NPP3 PE=2 SV=1)

HSP 1 Score: 67.781 bits (164), Expect = 1.948e-11
Identity = 29/63 (46.03%), Postives = 41/63 (65.08%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFI 207
            RGV  +FG D    FL  + LDL  R+H+V ++GYE   + +L+T+FSAPNYC +  N GA +
Sbjct:  218 RGVSYTFGPDKVSEFLSKHDLDLVCRAHQVVEDGYEFFAESELVTIFSAPNYCGEFDNAGAMM 280          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP4C_KLULA (Serine/threonine-protein phosphatase 4 catalytic subunit OS=Kluyveromyces lactis GN=PPH3 PE=3 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 35/84 (41.67%), Postives = 49/84 (58.33%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVPHPD 270
            RG G  FG +   +FL  NS++L  R+H++  EGY+   DG L+TV+SAPNYC + GN  A +R +    K   + F AV   D
Sbjct:  208 RGAGFLFGQNEVDKFLHTNSVELIARAHQLVMEGYKEMFDGGLVTVWSAPNYCYRCGNVAAVLRIDDDMTKDYTI-FEAVQARD 290          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2A_TOBAC (Serine/threonine-protein phosphatase PP2A catalytic subunit OS=Nicotiana tabacum PE=2 SV=1)

HSP 1 Score: 67.3958 bits (163), Expect = 2.545e-11
Identity = 32/88 (36.36%), Postives = 52/88 (59.09%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP---HPDV 273
            RG G +FG D++++F   N+L L  R+H++  EG+   HD K++T+FSAPNYC + GN  + +  +  + +   + F   P    PDV
Sbjct:  217 RGAGYTFGQDISEQFNHTNNLKLIARAHQLVMEGFNWAHDQKVVTIFSAPNYCYRCGNMASILEVD-DSRERTFIQFEPAPRRGEPDV 303          
BLAST of FC925063 vs. ExPASy Swiss-Prot
Match: PP2A_DROME (Serine/threonine-protein phosphatase PP2A OS=Drosophila melanogaster GN=mts PE=1 SV=1)

HSP 1 Score: 67.0106 bits (162), Expect = 3.323e-11
Identity = 32/81 (39.51%), Postives = 49/81 (60.49%), Query Frame = 1
Query:   19 RGVGLSFGADVTKRFLQDNSLDLFVRSHEVKDEGYEIEHDGKLITVFSAPNYCDQMGNKGAFIRFEAPTLKPNVVTFSAVP 261
            RG G +FG D+++ F   N L L  R+H++  EGY   HD  ++T+FSAPNYC + GN+ A +  +  +LK + + F   P
Sbjct:  214 RGAGYTFGQDISETFNNTNGLTLVSRAHQLVMEGYNWCHDRNVVTIFSAPNYCYRCGNQAALMELD-DSLKFSFLQFDPAP 293          
The following BLAST results are available for this feature:
BLAST of FC925063 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 119
Match NameE-valueIdentityDescription
PPX2_PARTE1.948e-1140.74Serine/threonine-protein phosphatase PP-X homolog ... [more]
PPX1_PARTE1.948e-1140.74Serine/threonine-protein phosphatase PP-X homolog ... [more]
PP4C1_CAEEL1.948e-1140.74Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A2_PARTE1.948e-1139.51Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A1_PARTE1.948e-1139.51Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP1_MAIZE1.948e-1146.03Serine/threonine-protein phosphatase PP1 OS=Zea ma... [more]
PP13_TOBAC1.948e-1146.03Serine/threonine-protein phosphatase PP1 isozyme 3... [more]
PP4C_KLULA2.545e-1141.67Serine/threonine-protein phosphatase 4 catalytic s... [more]
PP2A_TOBAC2.545e-1136.36Serine/threonine-protein phosphatase PP2A catalyti... [more]
PP2A_DROME3.323e-1139.51Serine/threonine-protein phosphatase PP2A OS=Droso... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YA20FM1 TF Citrus clementina cDNA clone KN0AAP3YA20, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925063 ID=FC925063; Name=FC925063; organism=Citrus clementina; type=EST; length=344bp
CGAAGAGGGCCCTTTTAGAGAGGAGTGGGTCTTTCATTTGGTGCTGACGT
GACAAAAAGATTCCTGCAGGATAACAGTCTAGATTTATTTGTGCGATCAC
ACGAAGTTAAGGATGAAGGCTATGAGATTGAGCATGATGGCAAACTCATT
ACGGTATTTTCTGCACCAAATTACTGTGATCAGATGGGTAATAAGGGTGC
TTTTATTCGTTTTGAAGCTCCTACCTTGAAGCCAAATGTTGTTACGTTTT
CAGCTGTGCCTCACCCTGATGTCTAGCCATTGGCATATGCCTACAATTTC
CTACGAACGTTTCTTTACTATATCTCACATCGATGGAACGGCAA
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