FC925069
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: UAP56_HUMAN (Spliceosome RNA helicase BAT1 OS=Homo sapiens GN=BAT1 PE=1 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 7.359e-91 Identity = 167/228 (73.25%), Postives = 191/228 (83.77%), Query Frame = 2 Query: 2 ELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSAT Sbjct: 9 ELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSAT 230
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: UAP56_CANFA (Spliceosome RNA helicase BAT1 OS=Canis familiaris GN=BAT1 PE=3 SV=1) HSP 1 Score: 333.183 bits (853), Expect = 7.359e-91 Identity = 167/228 (73.25%), Postives = 191/228 (83.77%), Query Frame = 2 Query: 2 ELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 ELLDYEE D V T A G+ + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P++KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSAT Sbjct: 9 ELLDYEE------DEVETAAGGDGSEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPNVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSAT 230
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: UAP56_BOVIN (Spliceosome RNA helicase BAT1 OS=Bos taurus GN=BAT1 PE=2 SV=1) HSP 1 Score: 332.798 bits (852), Expect = 9.611e-91 Identity = 167/228 (73.25%), Postives = 190/228 (83.33%), Query Frame = 2 Query: 2 ELLDYEEEDAQAPDSVATKANGEAA--------KKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 ELLDYE+ D V T A G+ A K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG++IK +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSAT Sbjct: 9 ELLDYED------DEVETAAGGDGAEAPAKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLSIKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSAT 230
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: DDX39_HUMAN (ATP-dependent RNA helicase DDX39 OS=Homo sapiens GN=DDX39 PE=1 SV=2) HSP 1 Score: 330.487 bits (846), Expect = 4.770e-90 Identity = 161/221 (72.85%), Postives = 186/221 (84.16%), Query Frame = 2 Query: 2 ELLDY-EEEDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 +LLDY EEE+ QAP + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQVT LV+CHTRELA+QI E+ERFS Y+P +KV+VF+GG++IK +++LK CP +VVGTPGRILAL R++ SLKNV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSAT Sbjct: 9 DLLDYDEEEEPQAPQESTPAPPKKDIKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVTVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEEVLKKNCPHVVVGTPGRILALVRNRSFSLKNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSAT 229
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: UAP56_CHICK (Spliceosome RNA helicase BAT1 OS=Gallus gallus GN=BAT1 PE=2 SV=1) HSP 1 Score: 330.102 bits (845), Expect = 6.230e-90 Identity = 164/222 (73.87%), Postives = 191/222 (86.04%), Query Frame = 2 Query: 2 ELLDYEEEDAQ-APDSVATKANGEAAKKG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 ELLDYEE++ + A ++A + KG YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG+ +K +++LK CP IVVGTPGRILALAR+K L+LK+++HFILDECDKMLE LDMRRDVQEIF+MTPH+KQVMMFSAT Sbjct: 9 ELLDYEEDEVENAAGGDGSEAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQLEPVTGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVAVFFGGLAVKKDEEVLKKNCPHIVVGTPGRILALARNKSLNLKHIKHFILDECDKMLEQLDMRRDVQEIFRMTPHEKQVMMFSAT 230
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: DDX39_MOUSE (ATP-dependent RNA helicase DDX39 OS=Mus musculus GN=Ddx39 PE=2 SV=1) HSP 1 Score: 329.717 bits (844), Expect = 8.136e-90 Identity = 160/221 (72.40%), Postives = 186/221 (84.16%), Query Frame = 2 Query: 2 ELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 ELLDY+E E+ QAP + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R + L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSAT Sbjct: 9 ELLDYDEDEEPQAPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPVNGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSAT 229
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: DDX39_RAT (ATP-dependent RNA helicase DDX39 OS=Rattus norvegicus GN=Ddx39 PE=2 SV=1) HSP 1 Score: 328.176 bits (840), Expect = 2.367e-89 Identity = 159/221 (71.95%), Postives = 185/221 (83.71%), Query Frame = 2 Query: 2 ELLDYEE-EDAQAPDSVATKANGEAAKKGYVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 ELLDY+E E+ Q P + K YV IHSSGFRDFLLKPELLRAIVD GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFVL+TLQQ EP GQV+ LV+CHTRELA+QI E+ERFS Y+P +KV+VF+GG++IK +D+LK CP +VVGTPGRILAL R + L+L+NV+HF+LDECDKMLE LDMRRDVQEIF++TPH+KQ MMFSAT Sbjct: 9 ELLDYDEDEEPQVPQESTPAPPKKDVKGSYVSIHSSGFRDFLLKPELLRAIVDCGFEHPSEVQHECIPQAILGMDVLCQAKSGMGKTAVFVLATLQQIEPINGQVSVLVMCHTRELAFQISKEYERFSKYMPSVKVSVFFGGLSIKKDEDVLKKNCPHVVVGTPGRILALVRSRSLNLRNVKHFVLDECDKMLEQLDMRRDVQEIFRLTPHEKQCMMFSAT 229
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: UAP56_CAEEL (Spliceosome RNA helicase BAT1 homolog OS=Caenorhabditis elegans GN=hel-1 PE=2 SV=1) HSP 1 Score: 305.449 bits (781), Expect = 1.643e-82 Identity = 153/222 (68.92%), Postives = 177/222 (79.73%), Query Frame = 2 Query: 2 ELLDYEEEDAQAPDSVATKANGEAAK-KG-YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 +LLDYEEE + D G+A K KG Y IHSSGFRDFLLKPE+LRAI D GFEHPSEVQHECIPQAILGMDV+CQAKSGMGKTAVFV++TLQQ EP G+V+ + +CHTRELA+QI E+ERFS YLP +KVAVF+GG+ IK ++ L N+CP IVVGTPGR+LALAR L L V++F+LDECDKM+ DMRRDVQEI KMTP KQVMMFSAT Sbjct: 5 QLLDYEEEQEEIQDKQPEVGGGDARKTKGTYASIHSSGFRDFLLKPEILRAIGDCGFEHPSEVQHECIPQAILGMDVVCQAKSGMGKTAVFVITTLQQLEPVDGEVSVVCMCHTRELAFQISKEYERFSKYLPGVKVAVFFGGMAIKKDEERLANDCPHIVVGTPGRMLALARSGKLKLDKVKYFVLDECDKMIGDADMRRDVQEIVKMTPQQKQVMMFSAT 226
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: UAP56_DROME (ATP-dependent RNA helicase WM6 OS=Drosophila melanogaster GN=Hel25E PE=1 SV=1) HSP 1 Score: 304.679 bits (779), Expect = 2.803e-82 Identity = 155/225 (68.89%), Postives = 182/225 (80.89%), Query Frame = 2 Query: 2 ELLDYEEEDAQAPDSVATKANGEAAKKG----YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVT-ALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNECPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 +LLDYE+E+ +V N EA KK YV IHSSGFRDFLLKPE+LRAIVD GFEHPSEVQHECIPQA+LGMD++CQAKSGMGKTAVFVL+TLQQ EP+ LV+CHTRELA+QI E+ERFS Y+P +KVAVF+GG+ I+ ++ LK+ P IVVGTPGRILAL R+K L+LK ++HF+LDECDKMLE LDMRRDVQEIF+ TPH KQVMMFSAT Sbjct: 6 DLLDYEDEEQTETTAVE---NQEAPKKDVKGTYVSIHSSGFRDFLLKPEILRAIVDCGFEHPSEVQHECIPQAVLGMDILCQAKSGMGKTAVFVLATLQQLEPSDNNTCHVLVMCHTRELAFQISKEYERFSKYMPTVKVAVFFGGMAIQKDEETLKSGTPHIVVGTPGRILALIRNKKLNLKLLKHFVLDECDKMLEQLDMRRDVQEIFRSTPHGKQVMMFSAT 227
BLAST of FC925069 vs. ExPASy Swiss-Prot
Match: SUB2_ASPOR (ATP-dependent RNA helicase sub2 OS=Aspergillus oryzae GN=sub2 PE=3 SV=1) HSP 1 Score: 299.671 bits (766), Expect = 9.016e-81 Identity = 155/240 (64.58%), Postives = 183/240 (76.25%), Query Frame = 2 Query: 2 ELLDYEEEDAQAPDSVATKA----NGEAAKKG--------------YVGIHSSGFRDFLLKPELLRAIVDSGFEHPSEVQHECIPQAILGMDVICQAKSGMGKTAVFVLSTLQQTEPNPGQVTALVLCHTRELAYQICHEFERFSTYLPDIKVAVFYGGVNIKIHKDLLKNE--CPQIVVGTPGRILALARDKDLSLKNVRHFILDECDKMLESLDMRRDVQEIFKMTPHDKQVMMFSAT 661 +L+DY +E+ Q D+ AT A NG+AAKKG YVGIHS+GFRDFLLK ELLRAI D GFEHPSEVQ CIP AIL +DV+CQAKSG+GKTAVFVL+TL Q EP PG+ + LV+CHTRELAYQI +E+ RFS YLPD+K AVFYGG I+ ++L N+ P IVVGTPGR+ AL RDK LSL+NV+ F+LDECDKML+ +DMRRDVQEIF+ TP DKQVMMFSAT Sbjct: 6 DLIDYSDEELQTTDAAATTAAPAANGDAAKKGDLTVSGGRPDKKGSYVGIHSTGFRDFLLKGELLRAITDCGFEHPSEVQQVCIPTAILNVDVLCQAKSGLGKTAVFVLTTLHQLEPVPGECSVLVMCHTRELAYQIKNEYARFSKYLPDVKTAVFYGGTPIQKDVEVLSNKESYPNIVVGTPGRLNALVRDKKLSLRNVKAFVLDECDKMLDQIDMRRDVQEIFRATPADKQVMMFSAT 245 The following BLAST results are available for this feature:
BLAST of FC925069 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925069 ID=FC925069; Name=FC925069; organism=Citrus clementina; type=EST; length=661bpback to top |