FC925075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPB6_ORYSJ (Expansin-B6 OS=Oryza sativa subsp. japonica GN=EXPB6 PE=2 SV=1) HSP 1 Score: 113.62 bits (283), Expect = 1.058e-24 Identity = 67/205 (32.68%), Postives = 107/205 (52.20%), Query Frame = 2 Query: 128 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH--SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSN------WGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYD-GKWIWAKNVLPADWKP 715 + GACG+ ++ + G ++KDG GCG+C+Q+RC CSG VI+TD+N+ + F +S AF A++ G + G++D++++RVPC Y + VEE S P Y AV V Y+ ++V +D+ + S+ W M ++G++W N LQ F + D GK + A NV+PA+W P Sbjct: 63 NGGACGFKNVNQYPFSSMTSCGNEPIFKDGKGCGSCYQIRCNKDPSCSGNIETVIITDMNYYPVARYHFDLSGTAFGAMAKPGLNDKLRHSGIIDIQFRRVPCNYPGLKINFHVEEGS-NPVYFAVLVEYEDLDGDVVQVDLMESKSAYGGATGVWTPMRESWGSIWRLD--SNHRLQAPFSLRIRSDSGKTLVANNVIPANWSP 264
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXB17_ORYSJ (Expansin-B17 OS=Oryza sativa subsp. japonica GN=EXPB17 PE=3 SV=2) HSP 1 Score: 112.464 bits (280), Expect = 2.356e-24 Identity = 68/208 (32.69%), Postives = 110/208 (52.88%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLA-LSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTD-----LNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWKP 715 ++ + GACGYGSL + + + P L+KDG GCGAC++++C + +CS + VI+TD L +T F +S AF ++ G G + G + V Y+R C+Y +N+A RV E S +L++ V ++ GQ ++ +M + Q S W M +GA W R P F +T+ K + A++V+P +WKP Sbjct: 59 AEGDGSTGGACGYGSLVDVVPMKARVGSVSPVLFKDGEGCGACYKVKCLDHGICSRRAVTVIVTDECPGGLCAFGRTHFDLSGAAFSRMAVAGAGGHLRDRGQLSVVYRRTACKYGGKNIAFRVNEGSTN-FWLSLLVEFEDGQGDIGSMQIKQANSVEWLDMKHVWGATWCLVRGPLVG-PFSVRLTTLSAQKALTARDVIPRNWKP 264
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPB1_ARATH (Expansin-B1 OS=Arabidopsis thaliana GN=EXPB1 PE=2 SV=1) HSP 1 Score: 111.309 bits (277), Expect = 5.248e-24 Identity = 66/211 (31.28%), Postives = 112/211 (53.08%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLA-LSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHS------NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQ--FRFVVTSXYDGKWIWAKNVLPADWKP 715 ++ S GACGYGSL + + A P L+K G GCGAC+++RC + T+CS + +I TD + S T F +S AF ++ G I G++++ Y+R C+Y+ +N+A V S +L++ + Y+ G+ ++ +M + Q GS W M +GA W + G L+ F +T+ + K + A +V+P++W P Sbjct: 51 AEGDGSSGGACGYGSLVDVKPFKARVGAVSPILFKGGEGCGACYKVRCLDKTICSKRAVTIIATDQSPSGPSAKAKHTHFDLSGAAFGHMAIPGHNGVIRNRGLLNILYRRTACKYRGKNIAFHVNAGS-TDYWLSLLIEYEDGEGDIGSMHIRQAGSKEWISMKHIWGANW---CIVEGPLKGPFSVKLTTLSNNKTLSATDVIPSNWVP 257
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: MPAC1_CYNDA (Major pollen allergen Cyn d 1 OS=Cynodon dactylon GN=CYND1 PE=1 SV=1) HSP 1 Score: 110.153 bits (274), Expect = 1.169e-23 Identity = 63/198 (31.82%), Postives = 101/198 (51.01%), Query Frame = 2 Query: 134 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLN--HSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWKP 715 GACGY + G A G ++KDG GC AC++++CK P CSG+ V +TD N H F +S +AF A++ +G+ + K G + ++++RV C+Y + E +YLA+ V Y G +VA+D+ S + M ++GA+W D + G R + G + +V+PA+WKP Sbjct: 40 GACGYKDVDKPPFDGMTACGNEPIFKDGLGCRACYEIKCKEPVECSGEPVLVKITDKNYEHIAAYHFDLSGKAFGAMAKKGQEDKLRKAGELTLQFRRVKCKYPSGTKITFHIEKGSNDHYLALLVKYAAGDGNIVAVDIKPRDSDEFIPMKSSWGAIWRIDPKKPLKGPFSIRL---TSEGGAHLVQDDVIPANWKP 234
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPB5_ARATH (Expansin-B5 OS=Arabidopsis thaliana GN=EXPB5 PE=2 SV=2) HSP 1 Score: 109.768 bits (273), Expect = 1.527e-23 Identity = 70/202 (34.65%), Postives = 107/202 (52.97%), Query Frame = 2 Query: 128 SSGACGYG-SLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDL---NHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQ--FRFVVTSXYDGKWIWAKNVLPADWKP 715 + GACGYG ++A ++AG PSL+KDG GCGAC++++C +P LC+ K +V+++D F +S +AF AL+ +GKG + LG + V YKR C++ +A+ V ++ P Y++ V + G ++V G + M AVW S P L+ F +TS GK I AK V+P W P Sbjct: 51 TGGACGYGDAVAKHPYRCMVSAGGPSLFKDGKGCGACYRLKCDHP-LCTKKPIKVMISDECPGCTKESVHFDLSGKAFGALAKRGKGDQLRNLGELKVSYKRACCKHPKTMIAIHV-DAGANPYYMSFAVKFANGDGNFACIEVQPAG-GQYMKMEEMRSAVWRLS--PGVPLKGPFNIRLTSAVSGKKIIAKGVIPEKWSP 247
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPB2_ORYSJ (Expansin-B2 OS=Oryza sativa subsp. japonica GN=EXPB2 PE=2 SV=2) HSP 1 Score: 108.612 bits (270), Expect = 3.402e-23 Identity = 66/204 (32.35%), Postives = 106/204 (51.96%), Query Frame = 2 Query: 128 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNH--SNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSN-----WGYMSRNYGAVW--DTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWK 712 + GACG+ + + G L++DG GCGAC+Q+RC N CSG+ VI+TD+N+ + F +S AF A++ G + G++D++++RVPC ++ + VE S P YLAV V + +V +DV + S W M R++G++W D + G R V S G+ + A V+PA+W+ Sbjct: 50 NGGACGFKNTNQYPFMSMTSCGNEPLFQDGKGCGACYQIRCTNNPSCSGQPRTVIITDMNYYPVARYHFDLSGTAFGAMARPGLNDQLRHAGIIDIQFRRVPCYHRGLYVNFHVEAGS-NPVYLAVLVEFANKDGTVVQLDVMESLPSGKPTRVWTPMRRSWGSIWRLDANHRLQGPFSLRMVSES---GQTVIAHQVIPANWR 249
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPB3_ARATH (Expansin-B3 OS=Arabidopsis thaliana GN=EXPB3 PE=2 SV=2) HSP 1 Score: 107.842 bits (268), Expect = 5.803e-23 Identity = 65/201 (32.34%), Postives = 108/201 (53.73%), Query Frame = 2 Query: 134 GACGYGSLALSFNGGHLAAGV--PSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDL---NHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQ--FRFVVTSXYDGKWIWAKNVLPADWKP 715 GACGYG+L + H G P L+K+G GCGAC+++RC + ++CS + VI+TD T F +S F L+ G+ + G++ V Y+R C+Y+ +N+A V E S +L++ V ++ G+ ++ +M + Q G+ W M +GA W + G L+ F +T+ GK + A +V+P +W P Sbjct: 55 GACGYGTL-VDVKPLHARVGAVNPILFKNGEGCGACYKVRCLDKSICSRRAVTVIITDECPGCSKTSTHFDLSGAVFGRLAIAGESGPLRNRGLIPVIYRRTACKYRGKNIAFHVNEGS-TDFWLSLLVEFEDGEGDIGSMHIRQAGAREWLEMKHVWGANW---CIIGGPLKGPFSIKLTTLSAGKTLSATDVVPRNWAP 250
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXB12_ORYSJ (Expansin-B12 OS=Oryza sativa subsp. japonica GN=EXPB12 PE=2 SV=2) HSP 1 Score: 105.916 bits (263), Expect = 2.205e-22 Identity = 68/214 (31.78%), Postives = 106/214 (49.53%), Query Frame = 2 Query: 134 GACGYG-SLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLN--------------HSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVG---SSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXY-DGKWIWAKNVLPADWKP 715 GACGY ++ +AAG P +Y G GCG+C+++ C CSG V++TD + F +S AF A++ G+ + G++ ++Y RV CE+ L V +S PNYLA+ V Y +++ A+D+ +G S +W M +++GAVW R+ +G ALQ F V + G+ A N +PA W P Sbjct: 58 GACGYQYAVDQPPFSSRIAAGSPYIYDSGKGCGSCYRVVCAGNEACSGIPVTVVITDQGPGGPCLEELVDGQCMNEAAHFDMSGTAFGAMARPGQADQLRGAGLLQIQYTRVECEWTGVGLTF-VVDSGSNPNYLALLVEYDDNDSDLAAVDIMPIGAGASGSWIPMQQSWGAVW---RLNSGSALQGPFSVRLTFSSGQMFVASNAIPAGWNP 267
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXB16_ORYSJ (Expansin-B16 OS=Oryza sativa subsp. japonica GN=EXPB16 PE=2 SV=1) HSP 1 Score: 105.531 bits (262), Expect = 2.880e-22 Identity = 66/218 (30.28%), Postives = 110/218 (50.46%), Query Frame = 2 Query: 86 HQTKVAYFSQASALSS--GACGYGSLA-LSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTD-----LNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWKP 715 H ++ A S GACGYG+L + + A P L+K G GCGAC+++RC + ++CS + VI+TD + +T F +S AF L+ G G + G + V Y+R C+Y +N+A V E S +L++ V ++ G ++ +M + Q S+ W M +GA W + P F +T+ + + A++V+P +W P Sbjct: 46 HPATATWYGSADGDGSDGGACGYGTLVDVVPMKTRVGAVSPVLFKGGEGCGACYKVRCLDASICSRRAVTVIVTDECPGGVCAFGRTHFDLSGAAFARLAVAGHGGQLQNRGEISVVYRRTACKYGGKNIAFHVNEGS-TTFWLSLLVEFEDGDGDIGSMQLKQANSAQWQDMKHIWGATWSLTPGPLVG-PFSVRLTTLTTRQTLSAQDVIPKNWTP 261
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPB4_ARATH (Expansin-B4 OS=Arabidopsis thaliana GN=EXPB4 PE=2 SV=1) HSP 1 Score: 102.449 bits (254), Expect = 2.438e-21 Identity = 66/202 (32.67%), Postives = 99/202 (49.01%), Query Frame = 2 Query: 128 SSGACGYGS-LALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTD-----LNHSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWKP 715 + GACGYGS +A ++AG PSL+ +G GCG C+Q+ C CSG V +TD S +S +A AL+ G+ + GV+ V YKR C Y+ N+ R+ ++ P Y++ V Y+ G ++ +++ G S + M AVW + F +TS K I A NV+PA+WKP Sbjct: 50 TGGACGYGSAVANPPLYAMVSAGGPSLFNNGKGCGTCYQVVCIGHPACSGSPITVTITDECPGGPCASEPVHIDLSGKAMGALAKPGQADQLRSAGVIRVNYKRAACLYRGTNIVFRM-DAGANPYYISFVVEYENGDGDLSNVEIQPAGGS-FISMQEMRSAVWKVNSGSALRGPFNIRLTSGESHKVIVAYNVIPANWKP 249 The following BLAST results are available for this feature:
BLAST of FC925075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925075 ID=FC925075; Name=FC925075; organism=Citrus clementina; type=EST; length=716bpback to top |