FC925075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA7_ARATH (Expansin-A7 OS=Arabidopsis thaliana GN=EXPA7 PE=2 SV=1) HSP 1 Score: 94.3597 bits (233), Expect = 6.639e-19 Identity = 73/208 (35.10%), Postives = 109/208 (52.40%), Query Frame = 2 Query: 134 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC-KNPTLCSGKGTRVILTDLNHSN--------------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDT-SRVPNGALQFRFVVTSXYDGKWIWAKNVLPADW 709 GACGYG+L S G AA +L+ DG GCG CFQ+ C K+P SGK T V T+L N +T F ++ AFM L+ + G++ V Y+RVPC+ ++ + + + +S +L + V+ GG ++ +M V + +NW MS N+GA + S + +L FR VTS G+ I+A NV PA+W Sbjct: 56 GACGYGNLFNSGYGLSTAALSTTLFNDGYGCGQCFQITCSKSPHCYSGKSTVVTATNLCPPNWYQDSNAGGWCNPPRTHFDMAKPAFMKLA-------YWRAGIIPVAYRRVPCQ-RSGGMRFQFQGNSY---WLLIFVMNVGGAGDIKSMAV-KGSRTNWISMSHNWGASYQAFSSLYGQSLSFR--VTSYTTGETIYAWNVAPANW 249
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP30_ORYSJ (Putative expansin-A30 OS=Oryza sativa subsp. japonica GN=EXPA30 PE=3 SV=1) HSP 1 Score: 87.4261 bits (215), Expect = 8.116e-17 Identity = 68/217 (31.34%), Postives = 98/217 (45.16%), Query Frame = 2 Query: 116 ASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLN------------------HSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDT-SRVPNGALQFRFVVTSXYDGKWIWAKNVLPADW 709 AS GACGYG+L S G AA +L+KDG GCG C+QMRC C + +T N + + F +S AFM +++ + G+V V Y+RVPC + L ++ + P +L V+ G ++ M V G W MS N+GA + +++ AL F+ VTS G+ I A V PA W Sbjct: 50 ASETMGGACGYGNLYASGYGTDTAALSTTLFKDGYGCGTCYQMRCVGTASCYRGSPAITVTATNLCPPNWAEDPDRGGGGWCNPPRAHFDLSKPAFMRMAD-------WRAGIVPVMYRRVPCA-RAGGLRFALQGN---PYWLLAYVMNVAGAGDVGDMWVKAGGGGGWVRMSHNWGASYQAFAQLGGQALSFK--VTSYTTGQTILAAGVTPASW 253
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA3_ORYSJ (Expansin-A3 OS=Oryza sativa subsp. japonica GN=EXPA3 PE=2 SV=2) HSP 1 Score: 84.7297 bits (208), Expect = 5.261e-16 Identity = 68/230 (29.57%), Postives = 104/230 (45.22%), Query Frame = 2 Query: 62 ATACDRCVHQTKVAYF---SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC--KNPTLCSGKGTRVILTDLN--------HSNQTDFVISSRAFMALSNQG-KGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADW 709 A AC R V Q+ A F S GACGYG+L + G + AA +L+ DGA CGAC+ + C C G + +T N SN + R +S + + + G+V V YKRVPC+ ++ +R S +Y + + G + +VA + ++ W MSRN+GA W ++ G Q + DG+ + A NV P++W Sbjct: 20 AFACKRSVAQSAFATFYGGKDGSGTMGGACGYGNLYNAGYGLYNAALSSALFNDGAMCGACYTITCDTSQTKWCKPGGNSITITATNLCPPNWALPSNSGGWCNPPRQHFDMSQPAWENIAVYQAGIVPVNYKRVPCQ---RSGGIRFAISGH--DYFELVTVTNVGGSGVVAQMSIKGSNTGWMAMSRNWGANWQSNAYLAG--QSLSFIVQLDDGRKVTAWNVAPSNW 242
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA2_ORYSJ (Expansin-A2 OS=Oryza sativa subsp. japonica GN=EXPA2 PE=2 SV=2) HSP 1 Score: 82.8037 bits (203), Expect = 1.999e-15 Identity = 64/215 (29.77%), Postives = 104/215 (48.37%), Query Frame = 2 Query: 116 ASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNP-TLCSGKGTRVILTDL---NHSNQTD-----------FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADWK 712 AS GACGYG+L + G + AA L+ DGA CG+C+++RC N C V T+L N++ D F ++ AF+ + + + G+V V Y+RVPC K + + S N + V + G + V++ + S+ W MSRN+G W ++ +G +L F+ V+ DG+ + + NV+PA W+ Sbjct: 42 ASGTMGGACGYGNLYSTGYGTNTAALSTVLFNDGAACGSCYELRCDNDGQWCLPGSVTVTATNLCPPNYALPNDDGGWCNPPRPHFDMAEPAFLQIG-------VYRAGIVPVSYRRVPC-VKKGGIRFTINGHSYF-NLVLVTNVAGPGDVQSVSI---KGSSTGWQPMSRNWGQNWQSNSYLDGQSLSFQVAVS---DGRTVTSNNVVPAGWQ 241
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP26_ARATH (Putative expansin-A26 OS=Arabidopsis thaliana GN=EXPA26 PE=3 SV=2) HSP 1 Score: 81.6481 bits (200), Expect = 4.453e-15 Identity = 65/206 (31.55%), Postives = 99/206 (48.06%), Query Frame = 2 Query: 134 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC-KNPTLCSGKGTRVILTDL---NHSNQTD---------FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADW 709 GACGYG+L G AA +L+ DG CGAC+++ C ++P C ++ T+ N+S TD F +S F+ ++ K GVV V Y+R+PC ++ V+ E+ P +L V + GG ++ + V + + W M +N+G W TS V G L FR V T+ K W NV+P +W Sbjct: 77 GACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDLWCNPPQKHFDLSLAMFLKIAK-------YKAGVVPVRYRRIPC---SKTGGVKF-ETKGNPYFLMVLIYNVGGAGDIKYVQVKE-NKTGWITMKKNWGQNWTTSTVLTGQGLSFR-VTTTDGITKDFW--NVMPKNW 267
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP22_ARATH (Expansin-A22 OS=Arabidopsis thaliana GN=EXPA22 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 65/206 (31.55%), Postives = 98/206 (47.57%), Query Frame = 2 Query: 134 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC-KNPTLCSGKGTRVILTDL---NHSNQTD---------FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADW 709 GACGYG+L G AA +L+ DG CGAC+++ C ++P C ++ T+ N+S TD F +S F+ ++ K GVV V Y+R+PC ++ V+ E+ P +L V + GG ++ + V + + W M +N+G W T V G L FR V TS K W NV+P +W Sbjct: 71 GACGYGNLFRQGYGLATAALSTALFNDGYTCGACYEIMCTRDPQWCLPGSVKITATNFCPANYSKTTDLWCNPPQKHFDLSLAMFLKIAK-------YKAGVVPVRYRRIPC---SKTGGVKF-ETKGNPYFLMVLIYNVGGAGDIKYVQV-KGNKTGWITMKKNWGQNWTTITVLTGQGLSFR-VTTSDGITKDFW--NVMPKNW 261
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP15_ARATH (Expansin-A15 OS=Arabidopsis thaliana GN=EXPA15 PE=2 SV=2) HSP 1 Score: 79.337 bits (194), Expect = 2.210e-14 Identity = 65/218 (29.82%), Postives = 99/218 (45.41%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSNQTD----------------FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGS-SNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADW 709 S AS GACGYG+L G + AA +L+ +G CGACF+++C++ G +I+T N + F +S F ++ K GVV V Y+RVPC + + + S + V V GG ++ VA GS + W MSRN+G W ++ + NG AL F+ + DG+ + + N+ PA W Sbjct: 41 SDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIKCQSDGAWCLPGA-IIVTATNFCPPNNALPNNAGGWCNPPLHHFDLSQPVFQRIAQ-------YKAGVVPVSYRRVPC-MRRGGIRFTINGHSY---FNLVLVTNVGGAGDV--HSVAVKGSRTRWQQMSRNWGQNWQSNNLLNGQALSFKVTAS---DGRTVVSNNIAPASW 241
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA8_ORYSJ (Expansin-A8 OS=Oryza sativa subsp. japonica GN=EXPA8 PE=2 SV=1) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 64/212 (30.19%), Postives = 95/212 (44.81%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC-KNPTLCSGKGTRVILTDLNHSNQTDFVISS----------RAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDT-SRVPNGALQFRFVVTSXYDGKWIWAKNVLPADW 709 S AS GACGYG L + G AA +L+ GA CGACF + C T GT + +T N ++ +S R F + + + G+V V Y+RVPC+ ++ + V S Y + ++ G + VA + + W MSRN+GA W + +R+ AL FR DG+ + A +V PA W Sbjct: 36 SDASGTMGGACGYGDLYGAGYGTRTAALSTALFNGGASCGACFTIACDTRKTQWCKPGTSITVTATNFC-PPNYALSGDAGGWCNPPRRHFDMSQPAWETIAVYRAGIVPVNYRRVPCQ-RSGGIRFAVNGHS----YFELVLVTNVGGSGAVAQMWIKGSGTGWMAMSRNWGANWQSNARLDGQALSFR---VQADDGRVVTAADVAPAGW 238
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP11_ORYSJ (Expansin-A11 OS=Oryza sativa subsp. japonica GN=EXPA11 PE=2 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 64/215 (29.77%), Postives = 94/215 (43.72%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHSN--------------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADW 709 S AS GACGYG+L + G AA +L+ +G CGACF++RC C V T+L N + F ++ AF ++ + GVV V+Y+RV C K + + S + V V GG ++ A+ V + S W MS N+GA W +G L FR + DG+ + + NV P+ W Sbjct: 38 SDASGTMGGACGYGNLYSAGYGTSTAALSTALFNNGQSCGACFEVRCGGGGSCLAGTVAVTATNLCPPNYALAGDAGGWCNPPRPHFDMAEPAFTRIAQ-------ARAGVVPVQYRRVACA-KQGGIRFTITGHSY---FNLVLVTNVGGAGDVTAVSV-KGSRSGWQAMSHNWGANWQNGANLDGQPLSFRVTAS---DGRTVTSDNVAPSGW 237
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXB13_ORYSJ (Expansin-B13 OS=Oryza sativa subsp. japonica GN=EXPB13 PE=3 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 4.924e-14 Identity = 51/199 (25.63%), Postives = 85/199 (42.71%), Query Frame = 2 Query: 128 SSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLNHS--NQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVW--DTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWK 712 +SGACGY + + G + G ++KDG GCG+CF+++C P CS K + +TD+N F + AF A++ GK +++LK Y G ++V +++ + GS W + ++GA+W DT + G R G+ I A++ +P WK Sbjct: 60 NSGACGYKDVDKAPFLGMNSCGNDPIFKDGKGCGSCFEIKCSKPKACSDKPVLIHVTDMNDEPIAAYHFDLFGLAFGAMAKDGKDEELLK---------------------------------------YVAGDGDVVEVEIKEKGSEEWKALKESWGAIWRIDTPKPLKGPFSVRVTTEG---GEKIIAEDAIPDGWK 216 The following BLAST results are available for this feature:
BLAST of FC925075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925075 ID=FC925075; Name=FC925075; organism=Citrus clementina; type=EST; length=716bpback to top |