FC925075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA8_ARATH (Expansin-A8 OS=Arabidopsis thaliana GN=EXPA8 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 6.431e-14 Identity = 61/215 (28.37%), Postives = 104/215 (48.37%), Query Frame = 2 Query: 116 ASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCK-NPTLCSGKGTRVILTD-------LNHSN-------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADWK 712 AS GACGYG+L G + AA +L+ +G CGAC++M+C +P C G V T+ L++ N F ++ AF+ ++ + G+V V ++RVPC K + + S + V + GG ++ A+ + + +W MSRN+G W ++ N +L F+ V TS DG+ + + +V P++W+ Sbjct: 43 ASGTMGGACGYGNLYGQGYGTNTAALSTALFNNGLTCGACYEMKCNDDPRWCLGSTITVTATNFCPPNPGLSNDNGGWCNPPLQHFDLAEPAFLQIAQ-------YRAGIVPVSFRRVPC-MKKGGIRFTINGHSY---FNLVLISNVGGAGDVHAVSIKGSKTQSWQAMSRNWGQNWQSNSYMNDQSLSFQ-VTTS--DGRTLVSNDVAPSNWQ 243
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA5_ORYSJ (Expansin-A5 OS=Oryza sativa subsp. japonica GN=EXPA5 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 65/214 (30.37%), Postives = 100/214 (46.73%), Query Frame = 2 Query: 116 ASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTR------VILTDLNH--------SNQTDFVISSRAFMALSNQ-GKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADW 709 AS GACGYG+L G + AA +L+ +G CGACF++RC G G+ V++T N S+ + RA +S + + K G+V V Y+RV C+ K +R + + V V GG ++ A+ V S+ W +SRN+G W ++ + +G AL FR V T DG+ + + N +P W Sbjct: 77 ASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEVRCD----AGGGGSHSCLPGSVVVTATNFCPPNNALPSDDGGWCNPPRAHFDMSQPVFQRIALFKAGIVPVSYRRVACQKKG---GIRFTINGHS-YFNLVLVTNVGGAGDVHAVAVKSERSAAWQALSRNWGQNWQSAALLDGQALSFR-VTTG--DGRSVVSNNAVPRGW 279
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA2_ARATH (Expansin-A2 OS=Arabidopsis thaliana GN=EXPA2 PE=2 SV=2) HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 60/216 (27.78%), Postives = 99/216 (45.83%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCK-NPTLCSGKGTRVILTDL---NHSNQTD-----------FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWK 712 + AS GACGYG+L G AA +L+ G CGACF+++C+ +P C V T+ N + D F ++ AF+ ++ + G+V V ++RVPCE K + + + P + V + GG ++ A+ + + W MSRN+G W ++ G F VT DG+ + + +V+P DW+ Sbjct: 43 ADASGTMGGACGYGNLHSQGYGLQTAALSTALFNSGQKCGACFELQCEDDPEWCIPGSIIVSATNFCPPNFALANDNGGWCNPPLKHFDLAEPAFLQIAQ-------YRAGIVPVAFRRVPCE-KGGGIRFTI---NGNPYFDLVLITNVGGAGDIRAVSLKGSKTDQWQSMSRNWGQNWQSNTYLRGQ-SLSFQVTDS-DGRTVVSYDVVPHDWQ 245
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP14_ARATH (Expansin-A14 OS=Arabidopsis thaliana GN=EXPA14 PE=2 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 2.444e-13 Identity = 62/216 (28.70%), Postives = 99/216 (45.83%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC-KNPTLCSGKGTRVILTDLNHSN--------------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADW 709 + AS GACGYG+L G + AA +L+ G CGACFQ++C +P C G V T+ N Q F ++ F+ ++ K GVV V+Y+RV C K +R + + V + G +++++ + ++ W MSRN+G W ++ +G AL F+ V TS DG+ + + N P +W Sbjct: 40 ADASGTMGGACGYGNLYSQGYGTNTAALSTALFNGGQSCGACFQIKCVDDPKWCIGGTITVTGTNFCPPNFAQANNAGGWCNPPQHHFDLAQPIFLRIAQ-------YKAGVVPVQYRRVACRRKG---GIRFTINGHS-YFNLVLITNVAGAGDVISVSIKGT-NTRWQSMSRNWGQNWQSNAKLDGQALSFK-VTTS--DGRTVISNNATPRNW 240
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA1_ARATH (Expansin-A1 OS=Arabidopsis thaliana GN=EXPA1 PE=2 SV=1) HSP 1 Score: 75.0998 bits (183), Expect = 4.168e-13 Identity = 61/215 (28.37%), Postives = 97/215 (45.12%), Query Frame = 2 Query: 116 ASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKNPTLCSGKGTRVILTDLN----------------HSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADW 709 AS GACGYG+L G + AA +L+ +G CGACF++RC+N G+ +++T N + Q F +S F ++ + G+V V Y+RVPC + + + +Y + ++ G V + + + W MSRN+G W ++ NG +L F+ V TS DG+ I + NV A W Sbjct: 40 ASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGLSCGACFEIRCQNDGKWCLPGS-IVVTATNFCPPNNALPNNAGGWCNPPQQHFDLSQPVFQRIAQ-------YRAGIVPVAYRRVPCVRRG-----GIRFTINGHSYFNLVLITNVGGAGDVHSAMVKGSRTGWQAMSRNWGQNWQSNSYLNGQSLSFK-VTTS--DGQTIVSNNVANAGW 238
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA9_ARATH (Expansin-A9 OS=Arabidopsis thaliana GN=EXPA9 PE=2 SV=1) HSP 1 Score: 74.7146 bits (182), Expect = 5.444e-13 Identity = 61/219 (27.85%), Postives = 106/219 (48.40%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKN-PTLCSGKGTRVILTDLN----HSNQTD------------FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADWK 712 + AS GACGYG+L G + AA +L+ +G CG+CF+++C N P C +++T N + NQ F ++ F++++ K G+V V Y+R+PC K +R + K + V V G +++ + V + ++ W +SRN+G W ++ + G +L FR V TS DG+ + N+ P++W+ Sbjct: 43 ADASGTMGGACGYGNLYSQGYGVNTAALSTALFNNGLSCGSCFELKCINDPGWCLPGNPSILITATNFCPPNFNQASDNGGWCNPPREHFDLAMPMFLSIAK-------YKAGIVPVSYRRIPCRKKG---GIRFTINGFK-YFNLVLVTNVAGAGDVIKVSV-KGSNTQWLDLSRNWGQNWQSNALLVGQSLSFR-VKTS--DGRSSTSNNIAPSNWQ 246
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP32_ORYSJ (Expansin-A32 OS=Oryza sativa subsp. japonica GN=EXPA32 PE=2 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 7.110e-13 Identity = 62/216 (28.70%), Postives = 95/216 (43.98%), Query Frame = 2 Query: 119 SALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC-KNPTLCSGKGTRVILTDLN-------HSN---------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADWK 712 S GACGY + G A L+ GAGCGAC++++C +P C +++T N SN + F +S AF+ ++ + K G+V + Y+RVPC K + + + P + V V GG ++ + V W + RN+G W TS V G +L FR V+T + W +VLP DW+ Sbjct: 56 SGTLDGACGYKDTSKEGYGVQTVAVSTPLFGAGAGCGACYEVKCVDSPDGCKVGAAPLVVTATNLCPPNPGQSNDNGGWCNPPREHFDLSMPAFLQIAQE-------KAGIVPISYRRVPC-VKVGGIRYTI---TGNPYFNLVMVSNVGGAGDVAGLSVKGNKRVKWTPLKRNWGQEWQTSEVLTGESLTFR-VMTGDHRKATSW--HVLPPDWQ 257
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA4_ARATH (Expansin-A4 OS=Arabidopsis thaliana GN=EXPA4 PE=1 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12 Identity = 57/219 (26.03%), Postives = 100/219 (45.66%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKN-PTLCSGKGTRVILTDLN----------------HSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADWK 712 S AS GACGYG+L G + AA +L+ +G CGACF+++C N P C +++T N + + F ++ F+ ++ + G+V V Y+RVPC + +R + + + V + G ++V V + + W +SRN+G W ++ V G AL FR + D + + N++P++W+ Sbjct: 42 SDASGTMGGACGYGNLYSQGYGTNTAALSTALFNNGMSCGACFELKCANDPQWCHSGSPSILITATNFCPPNLAQPSDNGGWCNPPREHFDLAMPVFLKIAQ-------YRAGIVPVSYRRVPCRKRG---GIRFTINGHR-YFNLVLITNVAGAGDIVRASV-KGSRTGWMSLSRNWGQNWQSNAVLVGQALSFR---VTGSDRRTSTSWNMVPSNWQ 245
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP24_ARATH (Expansin-A24 OS=Arabidopsis thaliana GN=EXPA24 PE=2 SV=2) HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12 Identity = 59/207 (28.50%), Postives = 91/207 (43.96%), Query Frame = 2 Query: 134 GACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKN-PTLCSGKGTRVILT-----DLNHSN-------QTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADWK 712 GACGYG L G AA +L+ +G+ CGAC+++ C++ P C ++ T D N Q F +S F+ ++ K GVV V+++RVPC + E P++L + GG + AM + + W M +N+G +W T V G L FR + ++I +V P DWK Sbjct: 109 GACGYGDLHKQGYGLETAALSTALFNNGSRCGACYEIMCEHAPQWCLPGSIKITATNFCPPDFTKPNDNWCNPPQKHFDLSQPMFLKIAK-------YKAGVVPVKFRRVPC----AKIGGVKFEIKGNPHFLMILPYNVGGAGAVRAMQIKGT-RTQWIAMKKNWGQIWSTGVVLTGQCLSFRLTTSDGVMKEFI---DVTPPDWK 300
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP12_ARATH (Expansin-A12 OS=Arabidopsis thaliana GN=EXPA12 PE=2 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 1.213e-12 Identity = 63/214 (29.44%), Postives = 95/214 (44.39%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC---KNPTLC-SGKGTRVILTDLNHSNQTD---------FVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADW 709 + + A GACGY + + G H AA L++ G CG C+Q+RC +P C G V T+ +N + F +SS AF ++ +G G+V V Y+RV C+ + VR Q N+ V + GG + ++ V W M+RN+GA W +S G L F+ +T D K NV+P+ W Sbjct: 38 NDSPASLGGACGYDNPYHAGFGAHTAALSGELFRSGESCGGCYQVRCDFPADPKWCLRGAAVTVTATNFCPTNNNNGWCNLPRHHFDMSSPAFFRIARRGNE------GIVPVFYRRVGCKRRG---GVRFTMRGQ-GNFNMVMISNVGGGGSVRSVAVRGSKGKTWLQMTRNWGANWQSSGDLRGQRLSFKVTLT---DSKTQTFLNVVPSSW 238 The following BLAST results are available for this feature:
BLAST of FC925075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925075 ID=FC925075; Name=FC925075; organism=Citrus clementina; type=EST; length=716bpback to top |