FC925075
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXPA6_ORYSJ (Expansin-A6 OS=Oryza sativa subsp. japonica GN=EXPA6 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.655e-11 Identity = 63/223 (28.25%), Postives = 98/223 (43.95%), Query Frame = 2 Query: 116 ASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRC--KNPTLCSGKGTRVILTDLN----------------HSNQTDFVISSRAFMALSNQGKGQDILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSN-----WGYMSRNYGAVWDTSRVPNG-ALQFRFVVTSXYDGKWIWAKNVLPADWK 712 AS GACGYG+L G AA +L+ G CG+C+++RC + C G V +T N + + F ++ AF+ ++ G+V V ++RV C K VR + + V V GG ++ ++ V GS + W MSRN+G W ++ +G AL FR VT+ DG+ + +V PA W+ Sbjct: 41 ASGTMGGACGYGNLYSQGYGTSTAALSTALFNRGLSCGSCYELRCAGDHRRSCLPGGATVTVTATNFCPPNYALPSDGGGWCNPPRRHFDLAEPAFLRIARHA-------AGIVPVSFRRVACARKG---GVRFTVNGH-AYFNLVLVTNVGGAGDVRSLAVKGSGSGSRVGGRWQPMSRNWGQNWQSNAYLDGKALSFR--VTAG-DGRSLTCADVAPAGWQ 249
BLAST of FC925075 vs. ExPASy Swiss-Prot
Match: EXP15_ORYSJ (Expansin-A15 OS=Oryza sativa subsp. japonica GN=EXPA15 PE=2 SV=2) HSP 1 Score: 67.3958 bits (163), Expect = 8.691e-11 Identity = 63/213 (29.58%), Postives = 96/213 (45.07%), Query Frame = 2 Query: 110 SQASALSSGACGYGSLALSFNGGHLAAGVPSLYKDGAGCGACFQMRCKN---PTLCSGKGTRVILTDLN--------HSNQTDFVISSRAFMALSNQGKGQ-DILKLGVVDVEYKRVPCEYKNQNLAVRVEESSQKPNYLAVKVLYQGGQTEMVAMDVAQVGSSNWGYMSRNYGAVWDTSRVPNGALQFRFVVTSXYDGKWIWAKNVLPADWK 712 S AS GACGYG+L S G + AA +L+ DGA CG C+Q+ C + P C +G V +T N SN + R ++ Q I K G+V V Y+RVPC + V + NY + ++ + + + +++ +SRN+GA W + G F VTS G+ + +N++PA WK Sbjct: 43 SDASGTMGGACGYGNLYWSGYGTNTAALSSALFNDGASCGQCYQIACDHQAEPRWCL-QGRTVTITGTNLCPPNYALSSNDGGWCNPPRTHFDMAEPAWLQIGIYKAGIVPVLYQRVPCVKQG-----GVRFTMGGFNYFELVLISNVAGSGSIQSVWVKGPNTDRMPLSRNWGANWQSHAGLVGQ-TLTFGVTST-GGQTLVFQNIVPAWWK 247 The following BLAST results are available for this feature:
BLAST of FC925075 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 82
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925075 ID=FC925075; Name=FC925075; organism=Citrus clementina; type=EST; length=716bpback to top |