FC925079

Overview
NameFC925079
Unique NameFC925079
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAFK (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate K1 / Thailand) GN=CPK1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 2
Query:   77 REEMQKIFNQFDANKDGKISLTELA---TVLKSMGSSYKE-----EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI-KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            R+E+  IF + D N DG++   EL     +L+S  +   E     EE+  +++++D DK+G+I  SEF ++C        E  LR+AF+L+D DK+G I+ EEL    N  G+   S      ++   D + D  ++F+EF +MM
Sbjct:  374 RKELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKSGKITKEEL---ANLFGLTSISEQMWNEVLGEADKNKDNMIDFDEFVNMM 515          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAF7 (Calcium-dependent protein kinase 1 OS=Plasmodium falciparum (isolate 3D7) GN=CPK1 PE=3 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 48/145 (33.10%), Postives = 79/145 (54.48%), Query Frame = 2
Query:   77 REEMQKIFNQFDANKDGKISLTELA---TVLKSMGSSYKE-----EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI-KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            R+E+  IF + D N DG++   EL     +L+S  +   E     EE+  +++++D DK+G+I  SEF ++C        E  LR+AF+L+D DK+G I+ EEL    N  G+   S      ++   D + D  ++F+EF +MM
Sbjct:  374 RKELTDIFKKLDKNGDGQLDKKELIEGYNILRSFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRDAFNLFDTDKSGKITKEEL---ANLFGLTSISEQMWNEVLGEADKNKDNMIDFDEFVNMM 515          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CATR_CHLRE (Caltractin OS=Chlamydomonas reinhardtii PE=1 SV=1)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 43/142 (30.28%), Postives = 75/142 (52.82%), Query Frame = 2
Query:   77 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAA-GEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF-RSMMTTSL 496
            ++E+++ F+ FD +  G I   EL   ++++G   K+EE+ +++ ++D D  G I   EF T+     G      E+ +AF L+D D +G I+ ++L  V   LG   + +    MI   D + D  ++ +EF R M  TSL
Sbjct:   27 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEIDEDEFIRIMKKTSL 168          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CABP1_RAT (Calcium-binding protein 1 OS=Rattus norvegicus GN=Cabp1 PE=1 SV=2)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 44/142 (30.99%), Postives = 77/142 (54.23%), Query Frame = 2
Query:   80 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 487
            EE+++ F +FD +KDG I+  +L   +++MG    E EL+ + + ++ +  G +   +F       +   ++   G  ELR+AF  +D + +G IS  EL   + + LG +        +I+ VD +GDG V+FEEF  MM+
Sbjct:  156 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 297          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CABP1_HUMAN (Calcium-binding protein 1 OS=Homo sapiens GN=CABP1 PE=1 SV=4)

HSP 1 Score: 75.485 bits (184), Expect = 2.817e-13
Identity = 44/142 (30.99%), Postives = 77/142 (54.23%), Query Frame = 2
Query:   80 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 487
            EE+++ F +FD +KDG I+  +L   +++MG    E EL+ + + ++ +  G +   +F       +   ++   G  ELR+AF  +D + +G IS  EL   + + LG +        +I+ VD +GDG V+FEEF  MM+
Sbjct:  228 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMS 369          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: SCM1A_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-1-A OS=Xenopus laevis GN=slc25a24-A PE=2 SV=2)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 43/134 (32.09%), Postives = 73/134 (54.48%), Query Frame = 2
Query:   74 SREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 475
            S     ++F++ D NKDGK+ + EL   LK+MG +  +    +++E  DT+KDG +   EF            E +++ AF   D++K+G I + E+   L  LGI  S+D    ++K +D+DG   V++ E+R
Sbjct:   20 SHTRYAELFHKLDVNKDGKVDILELQEGLKAMGMAVGKGAEEKIVEAGDTNKDGHLDFGEFMRYLEEH-----EKKMKIAFTSLDKNKDGKIESSEVMNSLKTLGINISLDHAEKILKSMDSDGTLTVDWNEWR 148          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CML43_ARATH (Probable calcium-binding protein CML43 OS=Arabidopsis thaliana GN=CML43 PE=2 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 50/153 (32.68%), Postives = 83/153 (54.25%), Query Frame = 2
Query:   86 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMED-LDTDKDGFISLSEFETICRTSS----GAAG-------EAELREAFDLYDQDKNGLISAEELNLVLNRLGI--KCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSLKP 502
            + ++F+ FD N DG I++ EL+  L  +G      +L   ++  +  DK G +   +F  + +T      G  G       E++L EAF+++D+D +G ISA EL  VL +LG+     ++    MI  VD++ DG V+F EF++MM T + P
Sbjct:   29 LHRVFDLFDKNNDGFITVEELSQALSRLGLDADFSDLKSTVDSFIKPDKTG-LRFDDFAALHKTLDESFFGGEGSCCDGSPESDLEEAFNVFDEDGDGFISAVELQKVLKKLGLPEAGEIEQVEKMIVSVDSNHDGRVDFFEFKNMMQTVVVP 180          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 49/160 (30.63%), Postives = 78/160 (48.75%), Query Frame = 2
Query:    5 NKRKRKAMAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            N+ K+KA+    E  S     I   E ++ +F   D + DGKIS  EL   L+ +GS   E E+  +ME  D + +G +   EF  +         +   R+AF  +D+D +G I +EEL   L     +      + +++ VD D DG +N++EF  MM
Sbjct:  343 NRLKKKALRVIAEHLS-----IQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLMEVADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIMREVDTDKDGKINYDEFVVMM 497          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CATR6_PARTE (Caltractin ICL1f OS=Paramecium tetraurelia GN=Icl1f PE=3 SV=1)

HSP 1 Score: 75.0998 bits (183), Expect = 3.679e-13
Identity = 42/136 (30.88%), Postives = 73/136 (53.68%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 487
            E+++ F+ FD +    I   EL   + S+G   K + + +++ DLDTD  G I  +EF + +    S    +A++++ F+L+D ++ G I+ ++L  V   LG          MI   D+DGD  V FE+F ++MT
Sbjct:   43 EIKEAFDLFDTDGTQSIDPKELKAAMTSLGFEAKNQTIYQMISDLDTDGSGQIDFAEFLKLMTARISERDSKADIQKVFNLFDSERAGFITLKDLRKVAKELGETMDDSELQEMIDRADSDGDTQVTFEDFYNIMT 178          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: TNNC2_ANGAN (Troponin C, skeletal muscle OS=Anguilla anguilla PE=1 SV=1)

HSP 1 Score: 74.7146 bits (182), Expect = 4.806e-13
Identity = 46/155 (29.68%), Postives = 78/155 (50.32%), Query Frame = 2
Query:   32 ATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI----CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            A T+A S   + +++  E +  F+ FD +  G IS  EL TV++ +G +   EEL  ++E++D D  G I   EF  +     +       E EL E F ++D++ +G I  EE   +L   G   S +    ++   D + DG ++F+E+  MM
Sbjct:    4 AQTDARSFLSEEMIA--EFKAAFDMFDTDGGGDISTKELGTVMRMLGQNPTREELDAIIEEVDEDGSGTIDFEEFLVMMVRQLKEDQAGKSEEELAEFFRVFDKNGDGFIDREEFGEILRSSGEPVSEEEIDELMADGDKNNDGKIDFDEWLKMM 156          
The following BLAST results are available for this feature:
BLAST of FC925079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
CDPK1_PLAFK2.817e-1333.10Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
CDPK1_PLAF72.817e-1333.10Calcium-dependent protein kinase 1 OS=Plasmodium f... [more]
CATR_CHLRE2.817e-1330.28Caltractin OS=Chlamydomonas reinhardtii PE=1 SV=1[more]
CABP1_RAT2.817e-1330.99Calcium-binding protein 1 OS=Rattus norvegicus GN=... [more]
CABP1_HUMAN2.817e-1330.99Calcium-binding protein 1 OS=Homo sapiens GN=CABP1... [more]
SCM1A_XENLA3.679e-1332.09Calcium-binding mitochondrial carrier protein SCaM... [more]
CML43_ARATH3.679e-1332.68Probable calcium-binding protein CML43 OS=Arabidop... [more]
CDPKU_ARATH3.679e-1330.63Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CATR6_PARTE3.679e-1330.88Caltractin ICL1f OS=Paramecium tetraurelia GN=Icl1... [more]
TNNC2_ANGAN4.806e-1329.68Troponin C, skeletal muscle OS=Anguilla anguilla P... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YP19FM1 TF Citrus clementina cDNA clone KN0AAP1YP19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925079 ID=FC925079; Name=FC925079; organism=Citrus clementina; type=EST; length=669bp
ACAGAACAAAAGAAAAAGAAAAGCAATGGCAGCAACAACGGAGGCAGATT
CGAATAGGAAACAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTC
AACCAGTTCGACGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGC
GACCGTTTTGAAATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCC
GCGTCATGGAGGATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCG
GAGTTCGAAACGATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGA
GCTCCGCGAGGCGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTT
CGGCGGAGGAGTTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCG
GTTGATGGATGTGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGG
CAATGTGAATTTTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAAC
CTGGTCCTGCGCCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCC
GTACCGATATTAACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGC
CTACTTGTGTCTACTACTTTTAATGTTAATAAACTCTGATGCATTTTTCA
TGGTTTAAAAAAAAAAAAA
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