FC925079

Overview
NameFC925079
Unique NameFC925079
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CABP5_MOUSE (Calcium-binding protein 5 OS=Mus musculus GN=Cabp5 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12
Identity = 42/142 (29.58%), Postives = 77/142 (54.23%), Query Frame = 2
Query:   80 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 487
            +E+++ F +FD ++DG IS  +L  ++++MG    E EL  + + +  +  G +   +F       +   ++G  G  E+R+AF  +D + +G I+  EL   + R LG K +      +++  D +GDG V+FEEF  MM+
Sbjct:   31 DELREAFLEFDKDQDGFISYKDLGNLMRTMGYMPTEMELTELGQQIRMNLGGRVDFEDFVELMTPKLLAETAGMIGVQEMRDAFKEFDANGDGEITLAELQQAMQRLLGEKLTPREIAEVVQEADINGDGTVDFEEFVKMMS 172          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CABP4_MOUSE (Calcium-binding protein 4 OS=Mus musculus GN=Cabp4 PE=1 SV=1)

HSP 1 Score: 72.0182 bits (175), Expect = 3.115e-12
Identity = 44/143 (30.77%), Postives = 73/143 (51.05%), Query Frame = 2
Query:   80 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC-----RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 490
            EE+Q  F +FD ++DG I   EL   ++++G    E EL+ V + +     GF+   EF  +        ++   G  ELR AF  +D+D++G I+  EL       LG          M++ +D +GDG ++F+EF  M++T
Sbjct:  128 EELQAAFEEFDTDQDGYIGYRELGDCMRTLGYMPTEMELLEVSQHVKMRMGGFVDFEEFVELISPKLREETAHMLGVRELRIAFREFDKDRDGRITVAELRQAAPALLGEPLEGTELDEMLREMDLNGDGTIDFDEFVMMLST 270          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CML40_ARATH (Probable calcium-binding protein CML40 OS=Arabidopsis thaliana GN=CML40 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12
Identity = 43/147 (29.25%), Postives = 79/147 (53.74%), Query Frame = 2
Query:   56 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYK----EEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            + + +  R+E Q++F+ FD +  GK+S++ +   + ++ S  +    +E+      +  TD D  + L +F  +      A  E +L+EAF LY++ +   I+ + L  +L+ LG   S+  C  MI   D + DG +NF+EFR+MM
Sbjct:    2 KSENVNKRDEYQRVFSCFDKSHQGKVSVSTIERCVDAIKSGKRAVVDQEDTTNPNPEESTD-DKSLELEDFVKLVEEGEEADKEKDLKEAFKLYEESEG--ITPKSLKRMLSLLGESKSLKDCEVMISQFDINRDGIINFDEFRAMM 145          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12
Identity = 50/163 (30.67%), Postives = 81/163 (49.69%), Query Frame = 2
Query:    5 NKRKRKAMAATTEADSNRKQLIVSREE---MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            NK K+ A+    E+        +S EE   ++ +F   D +K G I+  EL + L  +GS   E E+ ++M+  D D +G I   EF  I  T      E+   +AF  +D+D +G I+ +EL   +   G+         +I  VD+D DG +N++EF +MM
Sbjct:  365 NKLKQLALKVIAES--------LSEEEIKGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMDAADVDGNGTIDYLEF--ITATMHRHKLESYEHQAFQYFDKDNSGFITKDELESAMKEYGMGDEAT-IKDIISEVDSDNDGRINYDEFCAMM 516          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12
Identity = 50/164 (30.49%), Postives = 77/164 (46.95%), Query Frame = 2
Query:    5 NKRKRKAMAATTEADSNRKQLIVSREEMQKI---FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV-AMIKPVDADGDGNVNFEEFRSMM 484
            NK K+ A+    E         +  EE+Q +   F   D +  G I+  EL   L  +GS   E E+ ++M+  D D +G I   EF T             L +AF  +D+D +G I+ +EL   L   G+    D  +  ++  VD+D DG +N+EEF +MM
Sbjct:  375 NKLKKLALKVIAEN--------IDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALKEYGM--GDDATIKEVLSDVDSDNDGRINYEEFCAMM 528          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CATR_NAEGR (Caltractin OS=Naegleria gruberi GN=CTN PE=2 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.068e-12
Identity = 47/166 (28.31%), Postives = 88/166 (53.01%), Query Frame = 2
Query:   20 KAMAATTEADSNRKQLIVS-----REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF-RSMMTTSL 496
            K + AT+   SN++++ +      R+E+++ F+ FD +  GKI   EL   ++++G   K+EE+ +++  +D +  G I  ++F + +    S     AE+ +AF L+D+D +G I+   L  V   LG   + +    MI+  D    G ++ E+F R M  T+L
Sbjct:    7 KKIGATSATSSNKQKVQIELTDEQRQEIKEAFDLFDMDGSGKIDAKELKVAMRALGFEPKKEEIKKMISGID-NGSGKIDFNDFLQLMTAKMSEKDSHAEIMKAFRLFDEDDSGFITFANLKRVAKDLGENMTDEELREMIEEADRSNQGQISKEDFLRIMKKTNL 171          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12
Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 2
Query:   92 KIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 475
            ++F + D NKDGK+ ++EL T L +MG S  + E  +++   DTDKD  +   EF    +       E +LR  F   D++++G + A+E+   L  LGI  S      ++  +D DG   +++ E+R
Sbjct:   27 ELFEKLDVNKDGKVDVSELKTGLAAMGFSMGKGEAQKIVTSGDTDKDEGLDFEEFSKYLKEH-----EKKLRLTFKSLDKNEDGRVDAKEIQQSLKDLGINLSDKDAEKILHSIDVDGTMTLDWNEWR 149          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: POLC3_SYRVU (Polcalcin Syr v 3 OS=Syringa vulgaris GN=SYRV3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.313e-12
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG 283
            E+++IF +FDAN DGKIS +EL   LK++G S   EE+ R+M ++DTD DGFIS  EF+   R +SG
Sbjct:    7 ELERIFKRFDANGDGKISSSELGETLKTLG-SVTPEEIQRMMAEIDTDGDGFISFEEFKDFARANSG 72          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CML21_ORYSJ (Probable calcium-binding protein CML21 OS=Oryza sativa subsp. japonica GN=CML21 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12
Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = 2
Query:   86 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFIS-------LSEFETICRTSSGAAG-------------EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVA----MIKPVDADGDGNVNFEEFRSMM 484
            ++++F  FD + DG I+  EL+  L  +G+     E       LD     +I+        +EFE +    +G  G             EA++REAF ++D+D +G ISA EL  VL+R+G+  +   C+A    MI   D D DG V++EEF++MM
Sbjct:   42 LRRVFEMFDRDGDGVITPAELSGALCRLGA---RGEAPPAAAALDAVVAAYIAPGMAGLRFAEFEALHAELAGLGGRQAVAAAEAEEEKEADMREAFGVFDEDGDGYISAAELQAVLSRMGLPEA--ACMARVRDMIAAADRDSDGRVDYEEFKAMM 193          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CDPKA_ARATH (Calcium-dependent protein kinase 10 OS=Arabidopsis thaliana GN=CPK10 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 6.939e-12
Identity = 51/163 (31.29%), Postives = 81/163 (49.69%), Query Frame = 2
Query:    5 NKRKRKAMAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVL-NRLGIKCSVDGCVA--MIKPVDADGDGNVNFEEFRSMM 484
            N+ K+K +    E  S     I   E ++ +F+  D +KDGKI+  EL   L+ +GS   E E+  +ME  D D +GF+   EF  +         +   + AF  +D+D +  I  +EL   L + LG     D  V   +++ VD D DG +N++EF +MM
Sbjct:  347 NRFKKKVLRVIAEHLS-----IQEVEVIKNMFSLMDDDKDGKITYPELKAGLQKVGSQLGEPEIKMLMEVADVDGNGFLDYGEFVAVIIHLQKIENDELFKLAFMFFDKDGSTYIELDELREALADELG---EPDASVLSDIMREVDTDKDGRINYDEFVTMM 501          
The following BLAST results are available for this feature:
BLAST of FC925079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
CABP5_MOUSE3.115e-1229.58Calcium-binding protein 5 OS=Mus musculus GN=Cabp5... [more]
CABP4_MOUSE3.115e-1230.77Calcium-binding protein 4 OS=Mus musculus GN=Cabp4... [more]
CML40_ARATH4.068e-1229.25Probable calcium-binding protein CML40 OS=Arabidop... [more]
CDPK_DAUCA4.068e-1230.67Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPK9_ARATH4.068e-1230.49Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CATR_NAEGR4.068e-1228.31Caltractin OS=Naegleria gruberi GN=CTN PE=2 SV=1[more]
SCMC1_DANRE5.313e-1231.25Calcium-binding mitochondrial carrier protein SCaM... [more]
POLC3_SYRVU5.313e-1252.24Polcalcin Syr v 3 OS=Syringa vulgaris GN=SYRV3 PE=... [more]
CML21_ORYSJ6.939e-1232.48Probable calcium-binding protein CML21 OS=Oryza sa... [more]
CDPKA_ARATH6.939e-1231.29Calcium-dependent protein kinase 10 OS=Arabidopsis... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YP19FM1 TF Citrus clementina cDNA clone KN0AAP1YP19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925079 ID=FC925079; Name=FC925079; organism=Citrus clementina; type=EST; length=669bp
ACAGAACAAAAGAAAAAGAAAAGCAATGGCAGCAACAACGGAGGCAGATT
CGAATAGGAAACAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTC
AACCAGTTCGACGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGC
GACCGTTTTGAAATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCC
GCGTCATGGAGGATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCG
GAGTTCGAAACGATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGA
GCTCCGCGAGGCGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTT
CGGCGGAGGAGTTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCG
GTTGATGGATGTGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGG
CAATGTGAATTTTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAAC
CTGGTCCTGCGCCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCC
GTACCGATATTAACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGC
CTACTTGTGTCTACTACTTTTAATGTTAATAAACTCTGATGCATTTTTCA
TGGTTTAAAAAAAAAAAAA
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