FC925079

Overview
NameFC925079
Unique NameFC925079
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length669
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM_TRYCR (Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2)

HSP 1 Score: 102.834 bits (255), Expect = 1.648e-21
Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R    +  E E++EAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM_TRYBG (Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R    +  E E++EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM_TRYBB (Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R    +  E E++EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMARKMQDSDSEEEIKEAFRVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM_NEUCR (Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   12 EFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM_MAGGR (Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   12 EFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM_COLTR (Calmodulin OS=Colletotrichum trifolii PE=3 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   12 EFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM_COLGL (Calmodulin OS=Colletotrichum gloeosporioides PE=2 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 53/135 (39.26%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG+I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  +G K + D    MI+  D DGDG +++ EF  +M
Sbjct:   12 EFKEAFSLFDKDGDGQITTKELGTVMRSLGQNPSESELQDMINEVDADNNGTIDFPEFLTMMARKMKDTDSEEEIREAFKVFDRDNNGFISAAELRHVMTSIGEKLTDDEVDEMIREADQDGDGRIDYNEFVQLM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM6_ARATH (Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K S +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLSDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALM2_ARATH (Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 PE=1 SV=3)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 55/135 (40.74%), Postives = 81/135 (60.00%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 484
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MIK  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIKEADVDGDGQINYEEFVKVM 146          
BLAST of FC925079 vs. ExPASy Swiss-Prot
Match: CALL3_HUMAN (Calmodulin-like protein 3 OS=Homo sapiens GN=CALML3 PE=1 SV=2)

HSP 1 Score: 102.449 bits (254), Expect = 2.152e-21
Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 2
Query:   83 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 472
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  +M ++D D +G +   EF   + R       E E+REAF ++D+D NG +SA EL  V+ RLG K S +    MI+  D DGDG VN+EEF
Sbjct:   12 EFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGTVDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVDEMIRAADTDGDGQVNYEEF 142          
The following BLAST results are available for this feature:
BLAST of FC925079 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 320
Match NameE-valueIdentityDescription
CALM_TRYCR1.648e-2140.74Calmodulin OS=Trypanosoma cruzi GN=CALA2 PE=3 SV=2[more]
CALM_TRYBG2.152e-2140.00Calmodulin OS=Trypanosoma brucei gambiense PE=3 SV... [more]
CALM_TRYBB2.152e-2140.00Calmodulin OS=Trypanosoma brucei brucei PE=3 SV=2[more]
CALM_NEUCR2.152e-2139.26Calmodulin OS=Neurospora crassa GN=cmd-1 PE=1 SV=2[more]
CALM_MAGGR2.152e-2139.26Calmodulin OS=Magnaporthe grisea GN=CMD1 PE=3 SV=4[more]
CALM_COLTR2.152e-2139.26Calmodulin OS=Colletotrichum trifolii PE=3 SV=2[more]
CALM_COLGL2.152e-2139.26Calmodulin OS=Colletotrichum gloeosporioides PE=2 ... [more]
CALM6_ARATH2.152e-2140.74Calmodulin-6 OS=Arabidopsis thaliana GN=CAM6 PE=1 ... [more]
CALM2_ARATH2.152e-2140.74Calmodulin-2/3/5 OS=Arabidopsis thaliana GN=CAM2 P... [more]
CALL3_HUMAN2.152e-2141.98Calmodulin-like protein 3 OS=Homo sapiens GN=CALML... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YP19FM1 TF Citrus clementina cDNA clone KN0AAP1YP19, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925079 ID=FC925079; Name=FC925079; organism=Citrus clementina; type=EST; length=669bp
ACAGAACAAAAGAAAAAGAAAAGCAATGGCAGCAACAACGGAGGCAGATT
CGAATAGGAAACAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTC
AACCAGTTCGACGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGC
GACCGTTTTGAAATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCC
GCGTCATGGAGGATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCG
GAGTTCGAAACGATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGA
GCTCCGCGAGGCGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTT
CGGCGGAGGAGTTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCG
GTTGATGGATGTGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGG
CAATGTGAATTTTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAAC
CTGGTCCTGCGCCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCC
GTACCGATATTAACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGC
CTACTTGTGTCTACTACTTTTAATGTTAATAAACTCTGATGCATTTTTCA
TGGTTTAAAAAAAAAAAAA
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