FC925082

Overview
NameFC925082
Unique NameFC925082
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length656
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: UGDH_CAEEL (UDP-glucose 6-dehydrogenase OS=Caenorhabditis elegans GN=sqv-4 PE=1 SV=1)

HSP 1 Score: 239.965 bits (611), Expect = 8.434e-63
Identity = 119/218 (54.59%), Postives = 161/218 (73.85%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            +ELSKL ANAFLAQRISS+N++SA+CEATGA +S+VA AVG D+RIG KFL ASVGFGGSCFQKD+L+LVY+CE   LP+VA+YW+ VI I+++Q+ RF ++++A +FNTV++KKIA+ GFAFKK+TGDTRE+ AI V K L+ + A+LS+YDP+V + Q+  DL       D             + ++V  D Y A + AH + +LTEWDE   L+
Sbjct:  223 SELSKLVANAFLAQRISSINSISAVCEATGAEISEVAHAVGYDTRIGSKFLQASVGFGGSCFQKDVLSLVYLCESLNLPQVADYWQGVININNWQRRRFADKIIAELFNTVTDKKIAIFGFAFKKNTGDTRESSAIHVIKHLMEEHAKLSVYDPKVQKSQMLNDLASVTSAQD-----------VERLITVESDPYAAARGAHAIVVLTEWDEFVELN 429          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: UDG_RHIME (UDP-glucose 6-dehydrogenase OS=Rhizobium meliloti GN=rkpK PE=3 SV=2)

HSP 1 Score: 134.806 bits (338), Expect = 3.821e-31
Identity = 79/218 (36.24%), Postives = 115/218 (52.75%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            +EL K A NAFLA +I+ +N ++ LCE  GANV  VA  +G D RIG KFL+A  G+GGSCF KD L LV   + +  P      +  + ++D +K     +V+A+    +   KIAVLG  FK +T D R++PAI V + L    AR++ YDP+  E+                      +   ++ +    D YEA  +A  + I+TEW+E   LD
Sbjct:  205 SELIKYAGNAFLAMKITFINEIADLCEKVGANVQDVARGIGLDGRIGSKFLHAGPGYGGSCFPKDTLALVKTAQDHDTP--VRLVETTVAVNDNRKRAMGRKVIAAAGGDIRGSKIAVLGLTFKPNTDDMRDSPAIAVVQALQDAGARVTGYDPEGMEN----------------------ARKLIEGLDCARDPYEAAAEADALVIITEWNEFRALD 398          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: TUAD_BACSU (UDP-glucose 6-dehydrogenase tuaD OS=Bacillus subtilis GN=tuaD PE=1 SV=1)

HSP 1 Score: 131.724 bits (330), Expect = 3.235e-30
Identity = 81/218 (37.16%), Postives = 117/218 (53.67%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            AE+ K AANAFLA +IS +N ++ +CE  GA+VS+VA  VG DSRIG KFL A +GFGGSCF KD   L+ I +  G P   +  + VI+ ++ Q+   V++++  M  +V  + I+VLG AFK +T D R  PA+D+   L    A +  YD                     P+ +   S    +QV    D Y A +D     ILT+W E+  ++
Sbjct:  201 AEMIKYAANAFLATKISFINDIANICERVGADVSKVADGVGLDSRIGRKFLKAGIGFGGSCFPKDTTALLQIAKSAGYP--FKLIEAVIETNEKQRVHIVDKLLTVM-GSVKGRTISVLGLAFKPNTNDVRSAPALDIIPMLQQLGAHVKAYD---------------------PIAIPEASAILGEQVEYYTDVYAAMEDTDACLILTDWPEVKEME 394          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: YWQF_BACSU (UDP-glucose 6-dehydrogenase ywqF OS=Bacillus subtilis GN=ywqF PE=1 SV=1)

HSP 1 Score: 124.79 bits (312), Expect = 3.954e-28
Identity = 76/214 (35.51%), Postives = 114/214 (53.27%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDEL 643
            AE+ K A+NAFLA +IS +N +S +CE  GA++  VA+ +G D RIG +FL A +G+GGSCF KD   LV I     +    E  K VIK+++ Q++  V++ + +    V+ K IA+LG +FK +T D RE P+I +   L    AR+  YDP                   H  H+ P +    + +       EA K +  V ILT+W ++
Sbjct:  200 AEMIKYASNAFLATKISFINEISNICEKVGADIEAVAYGMGQDKRIGSQFLKAGIGYGGSCFPKDTNALVQI--AGNVEHDFELLKSVIKVNNNQQAMLVDKAL-NRLGGVTGKTIALLGLSFKPNTDDMREAPSIVIADRLAALDARIRAYDPIAV---------------SHAKHVLPQAVEYKETIE------EAVKGSDAVMILTDWADI 389          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: UDG_RICBR (UDP-glucose 6-dehydrogenase OS=Rickettsia bellii (strain RML369-C) GN=udg PE=3 SV=1)

HSP 1 Score: 118.627 bits (296), Expect = 2.834e-26
Identity = 73/218 (33.49%), Postives = 111/218 (50.92%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            AEL K  +N+FLA +I+ +N M+ LCE  GA++  ++  +G D RIG  FLNA  GFGGSCF KDIL L  I + N +   ++  + VI+ +  + S  V+++   +   +  K IAVLG  +K  T D R +PAI++ K LL     +  +DP   E+      +   F  ++ L+L                A +    +  + I TEW E   LD
Sbjct:  200 AELIKYGSNSFLATKIAFINEMANLCEKIGADIKNLSKGIGLDKRIGTAFLNAGPGFGGSCFPKDILALNSIIKNNYID--SKILEAVIRSNKERPSLMVDKIATLLDEDLKGKNIAVLGLTYKAGTDDVRASPAIEIIKNLLDKGTYVKAFDPMGLEN------SQKTFQNENLLYLD--------------SAIKVCDSSDAIIITTEWSEFQALD 395          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: UDG_RICFE (UDP-glucose 6-dehydrogenase OS=Rickettsia felis GN=udg PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.313e-26
Identity = 76/218 (34.86%), Postives = 110/218 (50.46%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            +EL K A+N+FLA +I+ +N M+ LCE  G N+  ++  VG D RIG  FLNA  GFGGSCF KDIL L  + E + +    +  K VIK +  + S  V+++   +   +  K IAVLG  +K  T D R +PAI++ K LL     +  +DP   E+         K + +H            K +  +    EA K    + I TEW E   L+
Sbjct:  200 SELIKYASNSFLATKIAFINEMADLCEKIGGNIEDLSKGVGLDQRIGQNFLNAGPGFGGSCFPKDILALNNLVENHHID--CKILKAVIKSNKQRPSNMVDKIATLLDGDLKGKNIAVLGLTYKAGTDDVRASPAIEIVKILLNKDVYVKAFDPIGLENA--------KKNLEH------------KNLLYLDSVAEACKSVDIIVIATEWLEFKELN 395          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: UDG_RICCN (UDP-glucose 6-dehydrogenase OS=Rickettsia conorii GN=udg PE=3 SV=1)

HSP 1 Score: 117.472 bits (293), Expect = 6.313e-26
Identity = 75/218 (34.40%), Postives = 109/218 (50.00%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            +EL K A+N+FLA +I+ +N M+ LCE  G N+  ++  VG D RIG  FLNA  GFGGSCF KDIL L  + E + +       K VIK +  + S  V+++   +   +  K IA+LG  +K  T D R +PAI + K LL     +  +DP   E+         K + +H            K +  +  A +A K    + I TEW E   L+
Sbjct:  198 SELIKYASNSFLATKIAFINEMADLCEKIGGNIKDLSKGVGLDQRIGQNFLNAGPGFGGSCFPKDILALNNLVENHHID--CRILKAVIKSNKQRPSNMVDKIATLLDGDLKGKNIAILGLTYKAGTDDVRASPAIAIVKILLNKDVYVKAFDPIGLENA--------KKNLEH------------KNLLYLDSAVDACKSVDIIVIATEWSEFKELN 393          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: UDG_RICPR (UDP-glucose 6-dehydrogenase OS=Rickettsia prowazekii GN=udg PE=3 SV=1)

HSP 1 Score: 115.546 bits (288), Expect = 2.399e-25
Identity = 74/218 (33.94%), Postives = 108/218 (49.54%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            +EL K  +N+FLA +I+ +N M+ LCE  GAN+  ++  VG D RIG  FLNA  GFGGSCF KDIL L  + E + +    +  K VIK +  + S  V ++   +   +  + IA+LG  +K  T D R +PAI++   LL     +  +DP   E+         K + +H            K +     A EA K    + I TEW E   L+
Sbjct:  200 SELIKYVSNSFLATKIAFINEMADLCEKIGANIKDLSQGVGLDQRIGRNFLNAGPGFGGSCFPKDILALNNLVENHKID--CKILKSVIKSNKLRPSNMVAKIATLLDGDLKGRNIAILGLTYKAGTDDVRASPAIEIITILLNKDVYVKAFDPIGLENA--------KKNLEH------------KNLLYFASAVEACKSVDIIVIATEWSEFKELN 395          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: UDG_RICTY (UDP-glucose 6-dehydrogenase OS=Rickettsia typhi GN=udg PE=3 SV=1)

HSP 1 Score: 113.235 bits (282), Expect = 1.191e-24
Identity = 77/223 (34.53%), Postives = 109/223 (48.88%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDIL---NLV--YICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            +EL K A+N+FLA +I+ +N M+ LCE  GAN+  ++  VG D RIG  FLNA  GFGGSCF KDIL   NLV  Y  +C  L       K VIK +  +    V ++   +   +  + IA+LG  +K  T D R +PAI++   LL     +  +DP   E+         K + +H            K +     A EA +    + I TEW E   L+
Sbjct:  200 SELIKYASNSFLATKIAFINEMADLCEKIGANIKDLSQGVGLDQRIGRNFLNAGPGFGGSCFPKDILALNNLVENYKIDCKIL-------KSVIKSNKLRPGNMVAKIATLLDGDLKGRNIAILGLTYKAGTDDVRASPAIEIITILLNKDVYVKAFDPIGLENA--------KKNLEH------------KNLLYFASAVEACESVDIIVIATEWSEFKELN 395          
BLAST of FC925082 vs. ExPASy Swiss-Prot
Match: YTCA_BACSU (Putative UDP-glucose 6-dehydrogenase ytcA OS=Bacillus subtilis GN=ytcA PE=3 SV=1)

HSP 1 Score: 105.531 bits (262), Expect = 2.483e-22
Identity = 69/218 (31.65%), Postives = 109/218 (50.00%), Query Frame = 2
Query:    2 AELSKLAANAFLAQRISSVNAMSALCEATGANVSQVAFAVGTDSRIGPKFLNASVGFGGSCFQKDILNLVYICECNGLPEVAEYWKQVIKIDDYQKSRFVNRVVASMFNTVSNKKIAVLGFAFKKDTGDTRETPAIDVCKGLLGDKARLSIYDPQVTEDQIQRDLTMNKFDWDHPLHLQPMSPTTVKQVSVVWDAYEATKDAHGVCILTEWDELHTLD 655
            AEL K A N FLA +IS +N M+ +CEA  +++S ++ A+G D RIG  FL A +G+GGSCF KD+  L +  +           + V  I+D Q   ++ + + S F T+  KK AVLG +FK +T D R + A+ + + L      +  YDP+                   P HL+       + V+    A++A +++  + + TEW E    D
Sbjct:  199 AELIKYANNFFLAAKISFINEMARICEAYQSDISDISRAIGLDPRIGKHFLQAGIGYGGSCFPKDLQALQFAAQEKNTETF--LLRAVQHINDTQLGLYIKK-IQSFFETLQGKKAAVLGISFKPNTDDIRNSQAVRLMERLAELGCDVHAYDPEAV----------------LPEHLR-------QHVTQHSQAFDAIEESDFLFLATEWSEFLAFD 390          
The following BLAST results are available for this feature:
BLAST of FC925082 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 22
Match NameE-valueIdentityDescription
UGDH_CAEEL8.434e-6354.59UDP-glucose 6-dehydrogenase OS=Caenorhabditis eleg... [more]
UDG_RHIME3.821e-3136.24UDP-glucose 6-dehydrogenase OS=Rhizobium meliloti ... [more]
TUAD_BACSU3.235e-3037.16UDP-glucose 6-dehydrogenase tuaD OS=Bacillus subti... [more]
YWQF_BACSU3.954e-2835.51UDP-glucose 6-dehydrogenase ywqF OS=Bacillus subti... [more]
UDG_RICBR2.834e-2633.49UDP-glucose 6-dehydrogenase OS=Rickettsia bellii (... [more]
UDG_RICFE6.313e-2634.86UDP-glucose 6-dehydrogenase OS=Rickettsia felis GN... [more]
UDG_RICCN6.313e-2634.40UDP-glucose 6-dehydrogenase OS=Rickettsia conorii ... [more]
UDG_RICPR2.399e-2533.94UDP-glucose 6-dehydrogenase OS=Rickettsia prowazek... [more]
UDG_RICTY1.191e-2434.53UDP-glucose 6-dehydrogenase OS=Rickettsia typhi GN... [more]
YTCA_BACSU2.483e-2231.65Putative UDP-glucose 6-dehydrogenase ytcA OS=Bacil... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP1YP24FM1 TF Citrus clementina cDNA clone KN0AAP1YP24, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925082 ID=FC925082; Name=FC925082; organism=Citrus clementina; type=EST; length=656bp
TGCAGAGCTTTCTAAGCTTGCAGCCAATGCTTTCTTGGCACAGAGGATCT
CATCTGTTAATGCCATGTCAGCTCTCTGCGAGGCAACTGGAGCTAATGTC
AGTCAGGTGGCATTTGCTGTTGGTACAGACTCTAGGATTGGGCCCAAATT
CTTGAATGCTAGTGTTGGGTTCGGTGGCTCCTGCTTCCAGAAGGATATTT
TGAATCTGGTTTACATCTGCGAGTGCAATGGCCTTCCAGAGGTGGCTGAG
TACTGGAAACAAGTCATTAAGATCGATGATTACCAGAAAAGCCGTTTTGT
GAACCGCGTAGTTGCCTCTATGTTCAACACGGTTTCAAACAAGAAGATTG
CCGTTCTGGGATTTGCCTTCAAGAAGGATACCGGTGACACCAGAGAGACC
CCAGCCATTGATGTCTGCAAGGGGCTTTTGGGAGACAAAGCTCGGTTGAG
CATATACGACCCACAGGTCACCGAGGACCAGATCCAAAGGGACCTTACAA
TGAACAAGTTTGACTGGGACCATCCTCTTCACCTCCAGCCAATGAGTCCC
ACCACGGTGAAGCAAGTGAGCGTGGTCTGGGATGCCTATGAAGCAACAAA
AGATGCCCATGGTGTCTGCATCTTGACCGAGTGGGATGAGTTACATACTC
TTGACT
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