FC925090

Overview
NameFC925090
Unique NameFC925090
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length786
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: METN_LACBA (Methionine import ATP-binding protein metN OS=Lactobacillus brevis (strain ATCC 367 / JCM 1170) GN=metN PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30
Identity = 80/199 (40.20%), Postives = 123/199 (61.81%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLR---RKVGMLFQ-IPALFEGTVADNIRYGPQLRGKKLTENEVYKXXXXXXXXXXXXXKTG---AEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLLSEAKHP 595
            G SG+GKSTL+R +NRL +P +GTV ++G+DI  L    LR    K+GM+FQ    +   T+ADN+ Y   L+G  LT  E  K             K     A++S GQ QRVA+AR LAN+PE+L+ DE TSALDP +T +I ++L +L ++ G+T+V+++H ++ ++ I + V ++  GEI+E  + DL++    P
Sbjct:   43 GYSGAGKSTLVRVINRLQQPTAGTVEVNGQDILGLPSKELRVARTKIGMIFQHFNLMASRTIADNVGY--PLKGGTLTREERQKKVAHLLELVGLTEKATDYPAQLSGGQKQRVAIARALANDPEILISDEATSALDPKTTSSILELLKRLNQELGLTVVLITHEMEAVKEICNKVAVMDAGEIIE--RGDLVTIFSQP 237          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: METN1_LISIN (Methionine import ATP-binding protein metN 1 OS=Listeria innocua GN=metN1 PE=3 SV=1)

HSP 1 Score: 131.339 bits (329), Expect = 5.746e-30
Identity = 85/206 (41.26%), Postives = 123/206 (59.71%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPSGTVFLDGRDITDLDVLSLR---RKVGMLFQIPALFE-GTVADNIRYGPQLRGKKLTENEV-YKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE---VLKPDLLSEAKHPMALRFL 613
            G SG+GKSTL+R +N L  P +G V +DG++++ L    LR   RK+GM+FQ   L +  TV DNI    +L G    E E+                   +++S GQ QRVA+AR LA+EPE+LL DE TSALDP +T+ I  +L+K+  + G+TI +++H +  IQRI D V ++ NG +VE   VL  D+ ++AKH    RF+
Sbjct:   38 GYSGAGKSTLVRCINLLERPDAGQVLIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDNIAKPLKLEGVPKDEIEIRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPEILLSDEATSALDPETTEAILQLLLKINAELGITIFLITHELDVIQRICDRVAVMENGHLVEQGTVL--DIFTKAKHATTKRFV 241          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_SALRD (Phosphate import ATP-binding protein pstB OS=Salinibacter ruber (strain DSM 13855) GN=pstB PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.505e-30
Identity = 78/198 (39.39%), Postives = 117/198 (59.09%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG-----KKLTENEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLL 577
            GPSG GKSTLLR LNR+ E        GT+  DG+DI   D D + +RR++GM+FQ P  F  ++  N+ +G ++ G       L E  + +              +  ++S GQ QR+ +ARTLA +P+V+L+DEP SALDPI+T  IE+ + +LKK +  TIV+V+H+++Q  RI+D    L  G ++E+   D L
Sbjct:   37 GPSGCGKSTLLRCLNRMNELIQGTTLEGTILADGQDIYADDTDPVMVRRRIGMVFQKPNPFPKSIYKNVAWGAEINGYTGDLDALVERSL-RQAALWDEVKDQLHSSALDLSGGQQQRLCIARTLAVQPDVVLMDEPASALDPIATSKIEETITELKKDY--TIVIVTHNMQQASRISDETAFLYMGRLIEMSPTDQL 231          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_IDILO (Phosphate import ATP-binding protein pstB OS=Idiomarina loihiensis GN=pstB PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.505e-30
Identity = 80/199 (40.20%), Postives = 121/199 (60.80%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWEPPS-----GTVFLDGRDI--TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG---KKLTENEVYKXXXXXXXXXXXXXKTGAE---ISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPDLL 577
            GPSG GKSTLLR +NR+ +        G + + G +I   ++DV SLRR+VGM+FQ P  F  ++ +N+ YG +L+G   K++ +  V               +  A    +S GQ QR+ +AR++A EPE+LLLDEPTSALDPIST  IE+++  LK K+  T+V+V+H+++Q  R++D    L  G+++E    D L
Sbjct:   58 GPSGCGKSTLLRCINRMNDLVEICRIEGQIDMHGHNIYGKNVDVASLRRRVGMVFQRPNPFPKSIYENVVYGLRLQGVKDKRVLDEAVETSLRGAALWDEVKDRLNASAFSLSGGQQQRLVIARSIAIEPEILLLDEPTSALDPISTLTIEELITDLKDKY--TVVIVTHNMQQAARVSDQTAFLYMGKLIEYADTDTL 254          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB1_VIBF1 (Phosphate import ATP-binding protein pstB 1 OS=Vibrio fischeri (strain ATCC 700601 / ES114) GN=pstB1 PE=3 SV=1)

HSP 1 Score: 130.954 bits (328), Expect = 7.505e-30
Identity = 82/191 (42.93%), Postives = 119/191 (62.30%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDIT-DLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG---KKLTENEVYKXXXXXXXXXXXXXKTGAE---ISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKSTLLR LNR+ +       +G V LDG DI  ++DV  LR KVGM+FQ    F  ++ +N+ YG + +G   KK+ +  V K             +  +    +S GQ QR+ +ART+A EP+V+L+DEPTSALDPI+T  +E+++  LKK +  TIV+V+HS++Q +RI+D     + GE+VE
Sbjct:   36 GPSGCGKSTLLRCLNRMNDLIEGVKITGLVNLDGNDIYGNIDVADLRIKVGMVFQKANPFPMSIYENVAYGLKAQGVKDKKVLDAVVEKSLRGAALWDEVKDRLKSHAFGLSGGQQQRLCIARTIAMEPDVILMDEPTSALDPIATHKVEELMETLKKDY--TIVIVTHSMQQARRISDKTAFFLMGELVE 224          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_PELLD (Phosphate import ATP-binding protein pstB OS=Pelodictyon luteolum (strain DSM 273) GN=pstB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.802e-30
Identity = 80/192 (41.67%), Postives = 115/192 (59.90%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG----KKLTE--NEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKST LRA+NR+ +       +GT+  DG DI     D + LR+K+GM+FQ P  F  ++ DNI YGP+L G    K+L E   +  +             +    +S GQ QR+ +ARTLA EPE+LLLDEPTSALDP +T  IED++ +L+  +  TI++V+H+++Q  R++D       G +VE
Sbjct:   72 GPSGCGKSTFLRAINRMNDLIPSCHTTGTLRFDGEDIYGKLTDEVLLRKKIGMVFQKPNPFPKSIFDNIAYGPRLHGMNDKKQLAEVVEKSLRKAALWDEVSDRLERNALGLSGGQQQRLCVARTLAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSY--TIMIVTHNMQQASRVSDYTMFFYEGTLVE 261          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_CHLTE (Phosphate import ATP-binding protein pstB OS=Chlorobium tepidum GN=pstB PE=3 SV=1)

HSP 1 Score: 130.568 bits (327), Expect = 9.802e-30
Identity = 80/192 (41.67%), Postives = 114/192 (59.38%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG----KKLTE--NEVYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKST LRA+NR+ +       +G +  DG DI     D + LR+K+GM+FQ P  F  ++ DNI YGP+L G    KKL+E   +  +             K    +S GQ QR+ +AR LA EPE+LLLDEPTSALDP +T  IED++ +L+  +  TI++V+H+++Q  R++D       G +VE
Sbjct:   72 GPSGCGKSTFLRAINRMNDLIPNCHTTGALMFDGEDIYGKFTDEVLLRKKIGMVFQKPNPFPKSIFDNIAYGPKLHGIKDKKKLSEIVEKSLRKAALWDEVSDRLDKNALGLSGGQQQRLCVARALAVEPEILLLDEPTSALDPKATAKIEDLIQELRGSY--TIMIVTHNMQQASRVSDYTMFFYEGVLVE 261          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_GLUOX (Phosphate import ATP-binding protein pstB OS=Gluconobacter oxydans GN=pstB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.280e-29
Identity = 83/198 (41.92%), Postives = 116/198 (58.59%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDIT--DLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENE-------VYKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVEVLKPD 571
            GPSG GKSTLLR  NR+++       +G V  DGR++   DLD+  LR +VGM+FQ P  F  ++ DNI +G +L  +KL + E       V                  + +S GQ QR+ +AR++A  PEVLLLDEPTSALDPIST  IE++L +LK++   TI +V+H+++Q  R AD V     G ++EV   D
Sbjct:   54 GPSGCGKSTLLRVFNRMYDLYPGQRATGEVIFDGRNVLERDLDLNILRARVGMVFQKPTPFPMSIYDNIAFGVRLH-EKLNKAEMDARVQDVLTRVALWNEVRDRLNAPASGLSGGQQQRLCIARSIATRPEVLLLDEPTSALDPISTARIEELLDELKEE--FTIAIVTHNMQQAARCADQVAFFYMGRLIEVDSAD 248          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_DESDG (Phosphate import ATP-binding protein pstB OS=Desulfovibrio desulfuricans (strain G20) GN=pstB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.280e-29
Identity = 81/192 (42.19%), Postives = 119/192 (61.98%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE--PPS---GTVFLDGRDITD--LDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRG---KKLTENEVYKXXXXXXXXXXXXXK---TGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKST LR LNR+ +  P S   G + LD  +I D  +DV+ LRR+VGM+FQ P  F  ++ +N+ YG ++ G   K   E++V +             +   +   +S GQ QR+ +AR LA EPEVLL+DEP SALDPI+TQ IE+++  LK+K+  TI++V+HS++Q  R++DV      G ++E
Sbjct:   39 GPSGCGKSTFLRCLNRMNDLIPISRVEGEICLDNDNIYDPQVDVVELRRRVGMVFQKPNPFPKSIYENVAYGLRVNGVKDKNCLEDKVEESLRHAALWDEVKDRLHDSALGLSGGQQQRLCIARALAVEPEVLLMDEPASALDPIATQKIEELIHTLKQKY--TIIIVTHSMQQAARVSDVTAFFYMGRLIE 228          
BLAST of FC925090 vs. ExPASy Swiss-Prot
Match: PSTB_CLOTE (Phosphate import ATP-binding protein pstB OS=Clostridium tetani GN=pstB PE=3 SV=1)

HSP 1 Score: 130.183 bits (326), Expect = 1.280e-29
Identity = 77/192 (40.10%), Postives = 116/192 (60.42%), Query Frame = 2
Query:   20 GPSGSGKSTLLRALNRLWE-----PPSGTVFLDGRDI-TDLDVLSLRRKVGMLFQIPALFEGTVADNIRYGPQLRGKKLTENEV-------YKXXXXXXXXXXXXXKTGAEISVGQAQRVALARTLANEPEVLLLDEPTSALDPISTQNIEDVLVKLKKKHGMTIVMVSHSIKQIQRIADVVCLLVNGEIVE 556
            GPSG GKST LR++NR+ +        G V   G+DI  + D + LR++VGM+FQ    F  ++ DN+ YGP++ G K  +NE+        K             K    +S GQ QR+ +ARTLA EPE++L+DEPTSALDPIST  IE+++  LKK +   +++V+H+++Q  RI+D     ++GE++E
Sbjct:   36 GPSGCGKSTFLRSINRMNDFIENVNIDGEVIFHGKDIYKEFDEIDLRKRVGMVFQKANPFPMSIYDNVAYGPRIHGIK-NKNELDIIVEKSLKKAALWDEIKDRLNKNAQGLSGGQQQRLCIARTLAVEPELILMDEPTSALDPISTSKIEELMHTLKKDY--PVIIVTHNMQQAGRISDDTAFFLSGEVIE 224          
The following BLAST results are available for this feature:
BLAST of FC925090 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
METN_LACBA5.746e-3040.20Methionine import ATP-binding protein metN OS=Lact... [more]
METN1_LISIN5.746e-3041.26Methionine import ATP-binding protein metN 1 OS=Li... [more]
PSTB_SALRD7.505e-3039.39Phosphate import ATP-binding protein pstB OS=Salin... [more]
PSTB_IDILO7.505e-3040.20Phosphate import ATP-binding protein pstB OS=Idiom... [more]
PSTB1_VIBF17.505e-3042.93Phosphate import ATP-binding protein pstB 1 OS=Vib... [more]
PSTB_PELLD9.802e-3041.67Phosphate import ATP-binding protein pstB OS=Pelod... [more]
PSTB_CHLTE9.802e-3041.67Phosphate import ATP-binding protein pstB OS=Chlor... [more]
PSTB_GLUOX1.280e-2941.92Phosphate import ATP-binding protein pstB OS=Gluco... [more]
PSTB_DESDG1.280e-2942.19Phosphate import ATP-binding protein pstB OS=Desul... [more]
PSTB_CLOTE1.280e-2940.10Phosphate import ATP-binding protein pstB OS=Clost... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YB02FM1 TF Citrus clementina cDNA clone KN0AAP3YB02, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925090 ID=FC925090; Name=FC925090; organism=Citrus clementina; type=EST; length=786bp
GGTGATCATCGTTATCATTGGGCCCAGTGGAAGCGGCAAATCAACCCTGT
TGAGGGCGCTGAACCGTCTGTGGGAGCCACCCTCTGGTACGGTGTTCTTG
GACGGCCGCGATATTACTGATCTCGACGTTCTCTCTCTTCGTCGTAAAGT
TGGCATGCTCTTCCAGATTCCGGCTCTCTTCGAAGGCACAGTTGCTGATA
ATATTCGATATGGACCACAATTGAGGGGAAAGAAATTAACCGAGAATGAG
GTTTACAAGTTGCTCTCACTTGCAGACCTCGACTCCTCTTTCCTTAGCAA
AACGGGTGCCGAAATATCAGTTGGCCAAGCTCAAAGAGTTGCTCTAGCTC
GAACACTGGCCAACGAACCAGAGGTTCTGCTTCTGGATGAGCCAACGAGT
GCATTGGATCCAATATCGACACAGAACATAGAGGATGTGTTAGTGAAGCT
GAAGAAGAAACATGGAATGACAATTGTCATGGTCTCTCACAGCATCAAAC
AAATCCAAAGGATCGCCGACGTCGTTTGCCTGCTAGTGAATGGTGAGATT
GTGGAAGTTCTGAAACCTGATCTGCTCTCGGAAGCCAAGCATCCCATGGC
ACTAAGGTTTCTTCAACTCAGCGGTTAGGGAGACATGTCACTTGTTCAAT
TTTATTCCACCATGTCAACTGTGCTGTCCCATTTGTACTTGATTATGAAA
ATAAACTGAATTATGTATTACTATATGAGCAAGTATTGTACTACATATAC
TTCTTGTACTTCCTAAAAAAAAAAAAAAAAAAAAAA
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