FC925121
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_EUBE2 (50S ribosomal protein L4 OS=Eubacterium eligens (strain ATCC 27750 / VPI C15-48) GN=rplD PE=3 SV=1) HSP 1 Score: 139.428 bits (350), Expect = 1.858e-32 Identity = 77/194 (39.69%), Postives = 112/194 (57.73%), Query Frame = 3 Query: 141 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 722 + + G+++G L+ + +VH A++ + N R+GT S TR EV GGGRKP+ QK TG AR+GS R+P GGGVVF PKPRD+S K+NKKEKR+ +V++ F+ + KTK+F E M +D KA ++ ++NV S RNI T+K+ +N +D+L ETLV+T Sbjct: 6 VYNIEGKEVGSIELNDAVFGVEVNEHLVHMAVVNQLANNRQGTQSAKTRSEVSGGGRKPWRQKGTGHARQGSTRSPQWTGGGVVFAPKPRDYSFKMNKKEKRIALLSALSSKVADNKIVVLDAFN--LDEIKTKKFAEVMSNLKVD---KALVVIEGENKNVVLSGRNIPTVKVSATNEINTYDVLKYETLVVT 194
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_ANATD (50S ribosomal protein L4 OS=Anaerocellum thermophilum (strain DSM 6725 / Z-1320) GN=rplD PE=3 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.405e-32 Identity = 79/195 (40.51%), Postives = 116/195 (59.49%), Query Frame = 3 Query: 135 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVL 719 +P+ + G++IGE L+ V+H+A++ + N+R+GT + TR EVRGGGRKP+ QK TGRAR+GS R P GGVVF KPRD+SI + KK KRL N IV++ +D + KTKE + ++ GL+ QKA ++ E +E ++KS++NI +K L LN+FDIL + V+ Sbjct: 4 VPVYNIEGQQIGEIELNDSIFNVPINTHVLHQAVVAHLANRRQGTFAAKTRAEVRGGGRKPWRQKGTGRARQGSIRAPTWRKGGVVFAKKPRDFSIDLPKKVKRLALKCALSSKVKENNLIVLDRWD--MNQYKTKEVLRVLKNLGLE-NQKALIVIPEKNEYLQKSTKNIPEVKTLQVGNLNVFDILKYDKFVI 195
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_EUBR3 (50S ribosomal protein L4 OS=Eubacterium rectale (strain ATCC 33656 / VPI 0990) GN=rplD PE=3 SV=1) HSP 1 Score: 137.502 bits (345), Expect = 7.059e-32 Identity = 75/194 (38.66%), Postives = 113/194 (58.25%), Query Frame = 3 Query: 141 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 722 + + G+++ + L+ + +VH A++ + NKR+GT TR EVRGGGRKP+ QK TG AR+GS R+P GGGVVF P PRD+S K+NKKEKR +VV+E K + KTK+F+E ++ + +KA ++ ++ E V S+ NI T+K LN+FD+L +T+V+T Sbjct: 6 VYNMEGKEVDKIELNDSIFGVEINEHLVHMAVLQQLANKRQGTQKAKTRSEVRGGGRKPWRQKGTGHARQGSTRSPQWTGGGVVFAPTPRDYSFKLNKKEKRAALKSALTSRVVENKFVVVDEL--KLDEIKTKKFVEVLKNLNV---EKALVVLNDMDEKVIASAANIPTVKTTQTNELNVFDVLKYDTVVVT 194
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_DESHY (50S ribosomal protein L4 OS=Desulfitobacterium hafniense (strain Y51) GN=rplD PE=3 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.220e-32 Identity = 74/194 (38.14%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 141 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 722 +++ G +GE LD + V+H+A++ + ++RRGT STL RGEVRGGGRKP+ QK TGRAR GS R+PL GG V+FGPKPR + + KK +RL + IV+E D KT+E ++ ++ L+ +KA + E E +E+S+RNI +K +N++D+L+++ +V+T Sbjct: 6 VVNMQGSPVGELELDEYVFGIEPNTHVMHQAVVGQLASQRRGTHSTLLRGEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGAVLFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQKLIVLE--DLSLNEAKTREMVKVLQ--ALNVSKKALIVTDEFMETIERSARNIAGIKTTAVEGMNIYDLLNSDVIVMT 195
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_HALOH (50S ribosomal protein L4 OS=Halothermothrix orenii (strain H 168 / OCM 544 / DSM 9562) GN=rplD PE=3 SV=1) HSP 1 Score: 136.732 bits (343), Expect = 1.204e-31 Identity = 77/190 (40.53%), Postives = 110/190 (57.89%), Query Frame = 3 Query: 153 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 722 TG ++G+ L + VVH+ + + RRGTAST TRGEV GGGRKP+ QK TGRAR GS R+PL GGG+VFGP+PR K+ KK K+L E I+++E KF+ PKTK+ +E + L+ K K ++ + N+ S+RNI +K L LN FD+L+ + +V++ Sbjct: 10 TGNRVGDIDLADNVFNEEVNEHVVHQVVTAQLATMRRGTASTKTRGEVSGGGRKPWRQKGTGRARHGSIRSPLWVGGGIVFGPRPRKHIKKVPKKVKKLALRSILSYKSQNEELIILDEL--KFDTPKTKQVVELLSNLNLEGK-KVLIILPDKDANIYLSARNIPGVKTLVVDALNAFDLLNNDCIVMS 196
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RK4_GRATL (50S ribosomal protein L4, chloroplastic OS=Gracilaria tenuistipitata var. liui GN=rpl4 PE=3 SV=1) HSP 1 Score: 136.346 bits (342), Expect = 1.573e-31 Identity = 76/189 (40.21%), Postives = 107/189 (56.61%), Query Frame = 3 Query: 153 TGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVL 719 T EK E + S + ++HRALI + N R A T TRGEV GGGRKP+ QK TGRAR GSNR+PL GGGV+FGP+ + + KINKKEK+L +NTIV E F K P TK + ++++ LD +V E S ++ S+RN+ +++L LN+ +L A +++ Sbjct: 17 TKEKESEEIVVKLSKQSNKKIYILHRALIHQLSNHRNRNAHTQTRGEVSGGGRKPWKQKGTGRARAGSNRSPLWRGGGVIFGPRHKKYVNKINKKEKQL--ALRILINNKFKNTIVTENFISKISTPNTKILVNNLKKYNLDTNNNILIIVNEKSNDLYLSTRNLKNVELLAANHLNIVSLLKANHIII 203
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_PELTS (50S ribosomal protein L4 OS=Pelotomaculum thermopropionicum (strain DSM 13744 / JCM 10971 / SI) GN=rplD PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 76/189 (40.21%), Postives = 110/189 (58.20%), Query Frame = 3 Query: 156 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 722 GE++GE L + + V+H A++ + N+R GT T TR EVRGGGRKP+ QK TGRAR GS R+PL GGG++FGP PRD+S + +K +RL + +V++E K ++PKTKE + +D A + E E VE+S+RNI +K + LN++DIL + LV+T Sbjct: 11 GEQVGELALKDEIFGVEVHEPVLHDAVVMHLANRRLGTHDTKTRSEVRGGGRKPWRQKGTGRARHGSIRSPLWRGGGIIFGPHPRDYSYSLPRKVRRLALKSALSAKVNSGDILVLDEL--KLDQPKTKEMARILNNLKVD---DALLVTAEKDEAVERSARNIPNIKPVQAALLNVYDILAYDKLVMT 194
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_NATTJ (50S ribosomal protein L4 OS=Natranaerobius thermophilus (strain ATCC BAA-1301 / DSM 18059 / JW/NM-WN-LF) GN=rplD PE=3 SV=1) HSP 1 Score: 135.576 bits (340), Expect = 2.683e-31 Identity = 79/189 (41.80%), Postives = 106/189 (56.08%), Query Frame = 3 Query: 156 GEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 722 G ++GE LD A D ++H A+ + +KRRGTAS TR EVRGGGRKP+ QK TGRAR GS R+P+ GGG+ F PKPRD+S K+ KK KR +++EE E PKTK+ IE + L KA + NV +S+RNI + LN++D+L+ + LVLT Sbjct: 11 GSQVGEITLDDSIFATDINETLMHEAVNMHLASKRRGTASAKTRSEVRGGGRKPWRQKGTGRARHGSIRSPIWVGGGISFAPKPRDYSYKMPKKAKRKAIKSALTTKLNNGEIVILEEL--TMEAPKTKKIIEMLE--NLSINHKAMIVTGASDLNVYRSTRNIPGVSSALANNLNVYDVLNHDYLVLT 195
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_GEOLS (50S ribosomal protein L4 OS=Geobacter lovleyi (strain ATCC BAA-1151 / DSM 17278 / SZ) GN=rplD PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31 Identity = 71/196 (36.22%), Postives = 114/196 (58.16%), Query Frame = 3 Query: 135 LPILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 722 + + + EKIGE LD + A + ++H+AL + N+R GT T TR EV GGG+KP+ QK TG AR+G +R P PGGG VFGP+P+ +++ INKK ++ E V+++ + F + TK+F M+++ L +++ + E S N+ SSRN+ +K+L LN+FD+L + +V+T Sbjct: 4 IALYNMNREKIGEVALDEQIFAAEVKEPLIHQALKVQLANRRAGTVKTKTRAEVSGGGKKPFKQKGTGNARQGCSRAPQYPGGGTVFGPQPKTYNLGINKKARKAALRSLLSMQLKSEKITVLDQIE--FAKISTKDFAGFMKKFDL---ERSLIITEEPSTNLALSSRNVPYVKLLKADGLNVFDVLKYQNIVMT 194
BLAST of FC925121 vs. ExPASy Swiss-Prot
Match: RL4_DESHD (50S ribosomal protein L4 OS=Desulfitobacterium hafniense (strain DCB-2 / DSM 10664) GN=rplD PE=3 SV=1) HSP 1 Score: 135.191 bits (339), Expect = 3.504e-31 Identity = 73/194 (37.63%), Postives = 115/194 (59.28%), Query Frame = 3 Query: 141 ILSFTGEKIGETYLDLKSAAPDTARAVVHRALITDMQNKRRGTASTLTRGEVRGGGRKPYSQKKTGRARRGSNRTPLRPGGGVVFGPKPRDWSIKINKKEKRLXXXXXXXXXXXXENTIVVEEFDGKFERPKTKEFIEAMRRWGLDPKQKATFLVMEVSENVEKSSRNIGTLKMLTPRTLNLFDILDAETLVLT 722 +++ G +GE LD + V+H+A++ + ++RRGT STL RGEVRGGGRKP+ QK TGRAR GS R+PL GG V+FGPKPR + + KK +RL + IV+E D KT+E ++ ++ L+ +KA + E E +++S+RNI +K +N++D+L+++ +V+T Sbjct: 6 VVNMQGSPVGELELDEYVFGIEPNTHVMHQAVVGQLASQRRGTHSTLLRGEVRGGGRKPWRQKGTGRARAGSIRSPLWRGGAVLFGPKPRKYGFSLPKKVRRLALRSALSSKVNEQKLIVLE--DLSLNEAKTREMVKVLQ--ALNVGKKALIVTDEFMETIDRSARNIAGIKTTAVEGMNIYDLLNSDVIVMT 195 The following BLAST results are available for this feature:
BLAST of FC925121 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925121 ID=FC925121; Name=FC925121; organism=Citrus clementina; type=EST; length=729bpback to top |