FC925129

Overview
NameFC925129
Unique NameFC925129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CML17_ORYSJ (Probable calcium-binding protein CML17 OS=Oryza sativa subsp. japonica GN=CML17 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 57/148 (38.51%), Postives = 84/148 (56.76%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF----ETICRTSSGAAG--------EAELREAFDLYDQDKNGLISAEELNLVLNRLGIK--CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E++++F  FD + DG+I+  EL   L+ +G     EEL   +  +D + DG + + EF    ET+ R   G  G        EA +REAFD++D++ +G I+ +EL  VL  LGIK   + + C  MI  VD DGDG V+F EF+ MM
Sbjct:    8 ELRRVFELFDRDGDGRITREELTESLERLGMPVHREELAATIARIDANGDGCVDMDEFTQLYETVMRVDGGGGGGGGACDVDEASMREAFDVFDRNGDGFITVDELGAVLASLGIKQGRTAEDCGRMIGQVDRDGDGRVDFLEFKQMM 155          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_SCHPO (Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE=1 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 53/137 (38.69%), Postives = 83/137 (60.58%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 479
            E ++ F+ FD ++DG I+  EL  V++S+G S    EL  ++ ++D D +G I  +EF T+  R       E E+REAF ++D+D NG I+ EEL  VL  LG + S +    MI+  D DGDG +N+EEF  ++++
Sbjct:   13 EFREAFSLFDRDQDGNITSNELGVVMRSLGQSPTAAELQDMINEVDADGNGTIDFTEFLTMMARKMKDTDNEEEVREAFKVFDKDGNGYITVEELTHVLTSLGERLSQEEVADMIREADTDGDGVINYEEFSRVISS 149          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_PYTSP (Calmodulin OS=Pythium splendens PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 54/135 (40.00%), Postives = 80/135 (59.26%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+ EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_PHYIN (Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 54/135 (40.00%), Postives = 80/135 (59.26%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+ EAF ++D+D NG ISA EL  ++  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEILEAFKVFDKDGNGFISAAELRHIMTNLGEKLTDEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_ORYLA (Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm1 PE=2 SV=1)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 461
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF
Sbjct:    5 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 135          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_MOUSC (Calmodulin OS=Mougeotia scalaris PE=2 SV=3)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 54/135 (40.00%), Postives = 80/135 (59.26%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA +   V+  LG K + +    MI+  D DGDG VN+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFKVFDKDQNGYISAADWRHVMTNLGEKLTDEEVDEMIREADVDGDGQVNYEEFVKMM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_EUGGR (Calmodulin OS=Euglena gracilis PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 55/135 (40.74%), Postives = 80/135 (59.26%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC-RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D  G I   EF T+  R       E E++EAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDQDGSGTIDFPEFLTLMSRKMHDTDTEEEIKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_AGABI (Calmodulin OS=Agaricus bisporus PE=1 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 54/135 (40.00%), Postives = 80/135 (59.26%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  + EL  ++ ++D D +G I   EF T+  R       E E++EAF ++D+D NG ISA EL  V+  LG K +      MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPSQAELEDMINEVDADGNGTIDFPEFLTMMARKMRDTDSEEEIKEAFKVFDKDGNGYISAAELRHVMTNLGEKLTDSEVDEMIREADVDGDGQINYEEFVKMM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALMA_ARBPU (Calmodulin-alpha (Fragment) OS=Arbacia punctulata PE=2 SV=2)

HSP 1 Score: 100.908 bits (250), Expect = 6.606e-21
Identity = 55/131 (41.98%), Postives = 79/131 (60.31%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF 461
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN+EEF
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 142          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CML2_ORYSJ (Putative calmodulin-like protein 2 OS=Oryza sativa subsp. japonica GN=CML2 PE=3 SV=2)

HSP 1 Score: 100.523 bits (249), Expect = 8.628e-21
Identity = 53/135 (39.26%), Postives = 79/135 (58.52%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ FN FD + DG I+  EL TV+ S+G S  E EL +++E++D D  G I   EF   + R       E ++REAF ++D+D+NG I+ +EL  V+  LG   S D    M+   D+DGDG +N+ EF  +M
Sbjct:   11 EFREAFNLFDKDGDGTITSKELGTVMGSLGQSPTEAELKKMVEEVDADGSGSIEFEEFLGLLARKLRDTGAEDDIREAFRVFDKDQNGFITPDELRHVMANLGDPLSDDELADMLHEADSDGDGQINYNEFLKVM 145          
The following BLAST results are available for this feature:
BLAST of FC925129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 319
Match NameE-valueIdentityDescription
CML17_ORYSJ6.606e-2138.51Probable calcium-binding protein CML17 OS=Oryza sa... [more]
CALM_SCHPO6.606e-2138.69Calmodulin OS=Schizosaccharomyces pombe GN=cam1 PE... [more]
CALM_PYTSP6.606e-2140.00Calmodulin OS=Pythium splendens PE=2 SV=1[more]
CALM_PHYIN6.606e-2140.00Calmodulin OS=Phytophthora infestans GN=CMD1 PE=3 ... [more]
CALM_ORYLA6.606e-2141.98Calmodulin-A (Fragment) OS=Oryzias latipes GN=calm... [more]
CALM_MOUSC6.606e-2140.00Calmodulin OS=Mougeotia scalaris PE=2 SV=3[more]
CALM_EUGGR6.606e-2140.74Calmodulin OS=Euglena gracilis PE=1 SV=2[more]
CALM_AGABI6.606e-2140.00Calmodulin OS=Agaricus bisporus PE=1 SV=2[more]
CALMA_ARBPU6.606e-2141.98Calmodulin-alpha (Fragment) OS=Arbacia punctulata ... [more]
CML2_ORYSJ8.628e-2139.26Putative calmodulin-like protein 2 OS=Oryza sativa... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YD17FM1 TF Citrus clementina cDNA clone KN0AAP8YD17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925129 ID=FC925129; Name=FC925129; organism=Citrus clementina; type=EST; length=686bp
GAAAAAGAAAAGCATTGGCAGCAACAACGGAGGCAGATTCGAATAGGAAA
CAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTCAACCAGTTCGA
CGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGA
AATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAG
GATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAAC
GATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGG
CGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTTCGGCGGAGGAG
TTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATG
TGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATT
TTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCG
CCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATT
AACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTC
TACTACTTTTAATGTTAATAAACTCTGATGCATTTTCAATGGTTTAAAAA
TTGGCTTACGATATTAAAAAAAAAAAAAAAAAAAAA
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