FC925129

Overview
NameFC925129
Unique NameFC925129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDC31_SCHPO (Cell division control protein 31 OS=Schizosaccharomyces pombe GN=cdc31 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 38/137 (27.74%), Postives = 71/137 (51.82%), Query Frame = 3
Query:   66 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAE-LREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            R+++ + F  FD++KD  I   EL   ++++G + ++ E+++++ D D    G++ + +F  +           E ++ AF+L+D D+ G IS   L  V   L          AMI+  D D DG +N +EF ++M
Sbjct:   36 RQDINEAFKLFDSDKDNAIDYHELRAAMRALGFNAEKSEVLKILRDFDKTGKGYLQMEDFVRVMTEKIVERDPLEEIKRAFELFDDDETGKISLRNLRRVAKELNENIDDQELEAMIEEFDLDQDGEINEQEFIAIM 172          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CABP5_BOVIN (Calcium-binding protein 5 OS=Bos taurus GN=CABP5 PE=1 SV=1)

HSP 1 Score: 74.3294 bits (181), Expect = 6.622e-13
Identity = 43/142 (30.28%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   69 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 476
            EE+++ F +FD ++DG IS  +L  ++++MG    E EL+ + + +  +  G +   +F       +   ++G  G  E+R+AF  +D + +G I+  EL   + R LG K +      +++  D +GDG V+FEEF  MM+
Sbjct:   31 EELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQIRMNLGGRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDANGDGEITLGELQQAMQRLLGDKLTSQEISEVVQEADINGDGTVDFEEFVKMMS 172          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CML8_ORYSJ (Probable calcium-binding protein CML8 OS=Oryza sativa subsp. japonica GN=CML8 PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 45/150 (30.00%), Postives = 76/150 (50.67%), Query Frame = 3
Query:   30 EADSNRKQLIVS-REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAA-GEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E    +K+L    R+E+++ F+ FD +  G I   EL   ++++G     E++ +++ ++D D  G I   EF  +     G      EL +AF + D+D NG IS  ++  +    G   ++D    MI+  D +GDG V+ EEF  MM
Sbjct:   32 EKQVRKKRLTAQKRKEIKEAFDLFDTDGSGTIDPKELNVAMRALGFEMTPEQIHQMIAEVDKDGSGTIDFDEFVHMMTDKMGERDAREELNKAFKIIDKDNNGKISDVDIQRLAIETGEPFTLDEVREMIEAADENGDGEVDHEEFLKMM 181          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPKL_ARATH (Calcium-dependent protein kinase 21 OS=Arabidopsis thaliana GN=CPK21 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 50/157 (31.85%), Postives = 78/157 (49.68%), Query Frame = 3
Query:    3 KRKALAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            K K LA    A+S  ++ I   + ++ +F   D +K G I+  EL T L  +GS   E E+ ++ME  D D +G I   EF +          +  + +AF  +D+D +G I+ +EL   +   G+         +I  VD D DG +NFEEF +MM
Sbjct:  364 KLKKLALKVIAESLSEEEI---KGLKTMFANIDTDKSGTITYEELKTGLTRLGSRLSETEVKQLMEAADVDGNGTIDYYEFISATMHRYKLDRDEHVYKAFQHFDKDNSGHITRDELESAMKEYGMGDEA-SIKEVISEVDTDNDGRINFEEFCAMM 516          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPKC_ARATH (Calcium-dependent protein kinase 12 OS=Arabidopsis thaliana GN=CPK12 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 45/141 (31.91%), Postives = 69/141 (48.94%), Query Frame = 3
Query:   60 VSREE---MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +S EE   ++++F   D +K G I+  EL   ++ +GS   E E+  ++   D D+ G I   EF       +    E  L  AF  +D+D +G I+ EEL       GI  S      MIK +D D DG +++ EF +MM
Sbjct:  320 LSEEEIGGLKELFKMIDTDKSGTITFEELKDSMRRVGSELMESEIQELLRAADVDESGTIDYGEFLAATIHLNKLEREENLVAAFSFFDKDASGYITIEELQQAWKEFGINDS--NLDEMIKDIDQDNDGQIDYGEFVAMM 458          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK8_ARATH (Calcium-dependent protein kinase 8 OS=Arabidopsis thaliana GN=CPK8 PE=1 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 44/134 (32.84%), Postives = 70/134 (52.24%), Query Frame = 3
Query:   75 MQKIFNQFDANKDGKISLTELATVLKSMGSSY-KEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +++ F   D+ K GKI+L EL   L  +G     + +L  +ME  D D DG ++  EF  +       A +  L +AF  +DQ+++  I  EEL   LN      S +   A+++ VD D DG +++EEF +MM
Sbjct:  363 IKEAFEMMDSKKTGKINLEELKFGLHKLGQQQIPDTDLQILMEAADVDGDGTLNYGEFVAVSVHLKKMANDEHLHKAFSFFDQNQSDYIEIEELREALNDEVDTNSEEVVAAIMQDVDTDKDGRISYEEFAAMM 496          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALML_DICDI (Calmodulin-like protein OS=Dictyostelium discoideum GN=calB PE=2 SV=1)

HSP 1 Score: 73.9442 bits (180), Expect = 8.648e-13
Identity = 41/136 (30.15%), Postives = 81/136 (59.56%), Query Frame = 3
Query:   78 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTS 482
            ++ FN FD +KDGKI++ EL  V++S+GS+  ++EL  + +++D D  G +  S+F ++  R    +  EA++++AF ++D+  NG  + ++L   L  +G K + +    M+K      DG ++ +EF  ++ +S
Sbjct:   12 KEAFNLFDKDKDGKITIQELGIVMRSVGSNPTQQELKDIAKEID-DGSGLVDFSKFSSLMTRKMKYSDSEADIKQAFKVFDKKGNGYANIQDLKHTLTSIGEKLTKEEFDNMLKDAKT-VDGQIHVDEFVRVIKSS 145          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPKU_ARATH (Calcium-dependent protein kinase 30 OS=Arabidopsis thaliana GN=CPK30 PE=1 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 49/157 (31.21%), Postives = 76/157 (48.41%), Query Frame = 3
Query:    3 KRKALAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            K+KAL    E  S     I   E ++ +F   D + DGKIS  EL   L+ +GS   E E+  +ME  D + +G +   EF  +         +   R+AF  +D+D +G I +EEL   L     +      + +++ VD D DG +N++EF  MM
Sbjct:  346 KKKALRVIAEHLS-----IQEVEVIRNMFTLMDDDNDGKISYLELRAGLRKVGSQLGEPEIKLLMEVADVNGNGCLDYGEFVAVIIHLQKMENDEHFRQAFMFFDKDGSGYIESEELREALTDELGEPDNSVIIDIMREVDTDKDGKINYDEFVVMM 497          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK2_ORYSJ (Calcium-dependent protein kinase isoform 2 OS=Oryza sativa subsp. japonica GN=CPK2 PE=2 SV=2)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 43/135 (31.85%), Postives = 70/135 (51.85%), Query Frame = 3
Query:   75 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELN--LVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            ++++F   D +  G I+  EL   L  +GS   E E+ ++ME  D D +G I   EF T          +  L +AF  +D+D +G I+ +EL   L+ + +G   ++     +I  VD D DG +N+EEF +MM
Sbjct:  390 LKQMFTNMDTDNSGTITYEELKAGLAKLGSKLSEAEVKQLMEAADVDGNGSIDYVEFITATMHRHKLERDEHLFKAFQYFDKDNSGFITRDELESALIEHEMGDTSTIKD---IISEVDTDNDGRINYEEFCAMM 521          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CATR_DUNSA (Caltractin OS=Dunaliella salina PE=2 SV=1)

HSP 1 Score: 73.559 bits (179), Expect = 1.129e-12
Identity = 43/142 (30.28%), Postives = 73/142 (51.41%), Query Frame = 3
Query:   66 REEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAA-GEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEF-RSMMTTSL 485
            ++E+++ F+ FD +  G I   EL   ++++G   K+EE+ +++ D+D    G I   EF  +  +  G      E+ +AF L+D D  G I+ + L  V   LG   + +    M    D +GDG ++ +EF R M  TSL
Sbjct:   27 KQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKAGSGTIDFEEFLQMMTSKMGERDSREEIIKAFKLFDDDNTGFITLKNLKRVAKELGENLTDEELQEMTDEADRNGDGQIDEDEFYRIMKKTSL 168          
The following BLAST results are available for this feature:
BLAST of FC925129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 319
Match NameE-valueIdentityDescription
CDC31_SCHPO6.622e-1327.74Cell division control protein 31 OS=Schizosaccharo... [more]
CABP5_BOVIN6.622e-1330.28Calcium-binding protein 5 OS=Bos taurus GN=CABP5 P... [more]
CML8_ORYSJ8.648e-1330.00Probable calcium-binding protein CML8 OS=Oryza sat... [more]
CDPKL_ARATH8.648e-1331.85Calcium-dependent protein kinase 21 OS=Arabidopsis... [more]
CDPKC_ARATH8.648e-1331.91Calcium-dependent protein kinase 12 OS=Arabidopsis... [more]
CDPK8_ARATH8.648e-1332.84Calcium-dependent protein kinase 8 OS=Arabidopsis ... [more]
CALML_DICDI8.648e-1330.15Calmodulin-like protein OS=Dictyostelium discoideu... [more]
CDPKU_ARATH1.129e-1231.21Calcium-dependent protein kinase 30 OS=Arabidopsis... [more]
CDPK2_ORYSJ1.129e-1231.85Calcium-dependent protein kinase isoform 2 OS=Oryz... [more]
CATR_DUNSA1.129e-1230.28Caltractin OS=Dunaliella salina PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YD17FM1 TF Citrus clementina cDNA clone KN0AAP8YD17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925129 ID=FC925129; Name=FC925129; organism=Citrus clementina; type=EST; length=686bp
GAAAAAGAAAAGCATTGGCAGCAACAACGGAGGCAGATTCGAATAGGAAA
CAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTCAACCAGTTCGA
CGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGA
AATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAG
GATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAAC
GATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGG
CGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTTCGGCGGAGGAG
TTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATG
TGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATT
TTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCG
CCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATT
AACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTC
TACTACTTTTAATGTTAATAAACTCTGATGCATTTTCAATGGTTTAAAAA
TTGGCTTACGATATTAAAAAAAAAAAAAAAAAAAAA
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