FC925129

Overview
NameFC925129
Unique NameFC925129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: TNNC_TODPA (Troponin C OS=Todarodes pacificus PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 41/135 (30.37%), Postives = 69/135 (51.11%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC-RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +  + F   D   +G +S  EL  + KS+     +++L + ++++D D  G I   +F+ +  R       E ELR AF + D++  G+I  E+L  +L  LG   + D    MI   D DG G V++EEF ++M
Sbjct:   12 DAHQAFKLHDKKDEGAVSNKELTNLFKSLALHVSDDKLQQWVDEMDEDATGVIRWEKFKILFERKVQEDEDERELRSAFRVLDKNNQGVIDVEDLRWILKSLGDDLNDDEIQDMINETDTDGSGTVDYEEFSALM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: LPS1A_LYTPI (Calcium-binding protein LPS1-alpha OS=Lytechinus pictus PE=2 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 48/145 (33.10%), Postives = 71/145 (48.97%), Query Frame = 3
Query:   78 QKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICR--TSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV-AMIKPVDADGDGNVNFEEFRSMMTTSLKPGPAP 503
            Q+  + +D NKDG +S  EL  ++     ++ EE    ++  LD + DG +   EF       T        E+++ FD  D+D NG IS +ELN  +  +  K  VDG    +I+  D DGDG+VN EEF   +   L  G  P
Sbjct:   22 QEFKDNYDTNKDGTVSCAELVKLM-----NWTEEMAQNIIARLDVNSDGHMQFDEFILYMEGSTKERLYSSDEIKQMFDDLDKDGNGRISPDELNKGVREIYTKV-VDGMANKLIQEADKDGDGHVNMEEFFDTLVVKLPIGMGP 160          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPKF_ARATH (Calcium-dependent protein kinase 15 OS=Arabidopsis thaliana GN=CPK15 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 49/163 (30.06%), Postives = 82/163 (50.31%), Query Frame = 3
Query:    3 KRKALAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGI--KCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTTSL 485
            K K LA    A+S  ++ I   + ++ +F   D +K G I+  EL   L  +GS   E E+ ++ME  D D +G I   EF +          +  + +AF  +D+D +G I+ +EL   +   G+  + S+   +A    VD D DG +N+EEF +MM + +
Sbjct:  386 KLKKLALKVIAESLSEEEI---KGLKTMFANMDTDKSGTITYEELKNGLAKLGSKLTEAEVKQLMEAADVDGNGTIDYIEFISATMHRYRFDRDEHVFKAFQYFDKDNSGFITMDELESAMKEYGMGDEASIKEVIA---EVDTDNDGRINYEEFCAMMRSGI 542          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK4_PLAYO (Calcium-dependent protein kinase 4 OS=Plasmodium yoelii yoelii GN=CPK4 PE=3 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 3
Query:   69 EEMQKIFNQFDANKDGKISLTELATVLKSM-----------GSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +E+ KIF + D N DG++   EL    K +            ++  E E+ +++  +D D++G+I  SEF T+            L +AF L+D+D +G ISA EL  +   LG   S D    ++K VD + DG ++F+EFR M+
Sbjct:  379 KELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGDDTTDLDNAAIEVEVDQILSSIDLDQNGYIEYSEFLTVAIDRKLLLSTERLEKAFKLFDKDGSGKISANELAQLFG-LG-DVSSDCWKTVLKEVDQNNDGEIDFKEFRDML 522          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK4_PLABA (Calcium-dependent protein kinase 4 OS=Plasmodium berghei (strain Anka) GN=CPK4 PE=1 SV=2)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 47/146 (32.19%), Postives = 76/146 (52.05%), Query Frame = 3
Query:   69 EEMQKIFNQFDANKDGKISLTELATVLKSM-----------GSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +E+ KIF + D N DG++   EL    K +            ++  E E+ +++  +D D++G+I  SEF T+            L +AF L+D+D +G ISA EL  +   LG   S D    ++K VD + DG ++F+EFR M+
Sbjct:  379 KELTKIFKKMDKNGDGQLDRNELIIGYKELLKLKGDDTTDLDNAAIEVEVDQILSSIDLDQNGYIEYSEFLTVAIDRKLLLSTERLEKAFKLFDKDGSGKISANELAQLFG-LG-DVSSDCWKTVLKEVDQNNDGEIDFKEFRDML 522          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK4_ARATH (Calcium-dependent protein kinase 4 OS=Arabidopsis thaliana GN=CPK4 PE=1 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 46/141 (32.62%), Postives = 68/141 (48.23%), Query Frame = 3
Query:   60 VSREE---MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +S EE   ++++F   D +  G I+  EL   LK +GS   E E+  +M+  D D  G I   EF       +    E  L  AF  +D+D +G I+ +EL       G+ C       MIK +D D DG ++F EF +MM
Sbjct:  323 LSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHINKMEREENLVVAFSYFDKDGSGYITIDELQQACTEFGL-CDTP-LDDMIKEIDLDNDGKIDFSEFTAMM 461          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK1_PLAYO (Calcium-dependent protein kinase 1 OS=Plasmodium yoelii yoelii GN=CPK1 PE=3 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 50/154 (32.47%), Postives = 81/154 (52.60%), Query Frame = 3
Query:   66 REEMQKIFNQFDANKDGKISLTELA---TVLKSMGSSYKE-----EELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR--LGIKCSVDGCVA--------MIKPVDADGDGNVNFEEFRSMM 473
            R+E+  IF + D N DG++   EL     VL++  +   E     EE+  +++++D DK+G+I  SEF ++C        E  LR AF+L+D DK+G I+ EEL  V+ R       S+ G  +        ++   D + D  ++F+EF SMM
Sbjct:  373 RKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITKEELANVIIRGFYFFTYSLFGLTSVSEKTWNDVLGEADQNKDNMIDFDEFVSMM 526          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CABP5_HUMAN (Calcium-binding protein 5 OS=Homo sapiens GN=CABP5 PE=2 SV=1)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 42/142 (29.58%), Postives = 78/142 (54.93%), Query Frame = 3
Query:   69 EEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-----ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 476
            EE+++ F +FD ++DG IS  +L  ++++MG    E EL+ + + +  +  G +   +F       +   ++G  G  E+R+AF  +D + +G I+  EL   + R LG + +      +++  D +GDG V+FEEF  MM+
Sbjct:   31 EELREAFLEFDKDRDGFISCKDLGNLMRTMGYMPTEMELIELGQQIRMNLGGRVDFDDFVELMTPKLLAETAGMIGVQEMRDAFKEFDTNGDGEITLVELQQAMQRLLGERLTPREISEVVREADVNGDGTVDFEEFVKMMS 172          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CABP2_MOUSE (Calcium-binding protein 2 OS=Mus musculus GN=Cabp2 PE=2 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 52/161 (32.30%), Postives = 84/161 (52.17%), Query Frame = 3
Query:    6 RKALAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLD---TDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 476
            R ++AAT      R + I   EE+Q  F +FD ++DG I   EL   ++++G    E EL+ + + +     D + F+ L   + +  T+    G  ELR+AF  +D + +G IS  EL   L   LG + S      +++ +D +GDG V+FEEF  MM+
Sbjct:   59 RPSIAATQLDRELRPEEI---EELQIAFQEFDRDRDGYIGYRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETAD-MIGVRELRDAFREFDTNGDGCISVGELRAALKALLGERLSQREVDEILQDIDLNGDGLVDFEEFVRMMS 215          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CABP2_HUMAN (Calcium-binding protein 2 OS=Homo sapiens GN=CABP2 PE=1 SV=3)

HSP 1 Score: 73.1738 bits (178), Expect = 1.475e-12
Identity = 53/161 (32.92%), Postives = 84/161 (52.17%), Query Frame = 3
Query:    6 RKALAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLD---TDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 476
            R ++AAT      R + I   EE+Q  F +FD ++DG I   EL   ++++G    E EL+ + + +     D + F+ L   + +  T+    G  ELR+AF  +D + +G IS  EL   L   LG + S      +++ VD +GDG V+FEEF  MM+
Sbjct:   63 RPSIAATQLDRELRPEEI---EELQVAFQEFDRDQDGYIGCRELGACMRTLGYMPTEMELIEISQQISGGKVDFEDFVELMGPKLLAETAD-MIGVRELRDAFREFDTNGDGRISVGELRAALKALLGERLSQREVDEILQDVDLNGDGLVDFEEFVRMMS 219          
The following BLAST results are available for this feature:
BLAST of FC925129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 319
Match NameE-valueIdentityDescription
TNNC_TODPA1.475e-1230.37Troponin C OS=Todarodes pacificus PE=1 SV=3[more]
LPS1A_LYTPI1.475e-1233.10Calcium-binding protein LPS1-alpha OS=Lytechinus p... [more]
CDPKF_ARATH1.475e-1230.06Calcium-dependent protein kinase 15 OS=Arabidopsis... [more]
CDPK4_PLAYO1.475e-1232.19Calcium-dependent protein kinase 4 OS=Plasmodium y... [more]
CDPK4_PLABA1.475e-1232.19Calcium-dependent protein kinase 4 OS=Plasmodium b... [more]
CDPK4_ARATH1.475e-1232.62Calcium-dependent protein kinase 4 OS=Arabidopsis ... [more]
CDPK1_PLAYO1.475e-1232.47Calcium-dependent protein kinase 1 OS=Plasmodium y... [more]
CABP5_HUMAN1.475e-1229.58Calcium-binding protein 5 OS=Homo sapiens GN=CABP5... [more]
CABP2_MOUSE1.475e-1232.30Calcium-binding protein 2 OS=Mus musculus GN=Cabp2... [more]
CABP2_HUMAN1.475e-1232.92Calcium-binding protein 2 OS=Homo sapiens GN=CABP2... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YD17FM1 TF Citrus clementina cDNA clone KN0AAP8YD17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925129 ID=FC925129; Name=FC925129; organism=Citrus clementina; type=EST; length=686bp
GAAAAAGAAAAGCATTGGCAGCAACAACGGAGGCAGATTCGAATAGGAAA
CAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTCAACCAGTTCGA
CGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGA
AATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAG
GATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAAC
GATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGG
CGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTTCGGCGGAGGAG
TTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATG
TGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATT
TTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCG
CCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATT
AACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTC
TACTACTTTTAATGTTAATAAACTCTGATGCATTTTCAATGGTTTAAAAA
TTGGCTTACGATATTAAAAAAAAAAAAAAAAAAAAA
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