FC925129

Overview
NameFC925129
Unique NameFC925129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CML40_ARATH (Probable calcium-binding protein CML40 OS=Arabidopsis thaliana GN=CML40 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 43/147 (29.25%), Postives = 79/147 (53.74%), Query Frame = 3
Query:   45 RKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYK----EEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            + + +  R+E Q++F+ FD +  GK+S++ +   + ++ S  +    +E+      +  TD D  + L +F  +      A  E +L+EAF LY++ +   I+ + L  +L+ LG   S+  C  MI   D + DG +NF+EFR+MM
Sbjct:    2 KSENVNKRDEYQRVFSCFDKSHQGKVSVSTIERCVDAIKSGKRAVVDQEDTTNPNPEESTD-DKSLELEDFVKLVEEGEEADKEKDLKEAFKLYEESEG--ITPKSLKRMLSLLGESKSLKDCEVMISQFDINRDGIINFDEFRAMM 145          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK_SOYBN (Calcium-dependent protein kinase SK5 OS=Glycine max PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 45/142 (31.69%), Postives = 70/142 (49.30%), Query Frame = 3
Query:   60 VSREE---MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIK-CSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +S EE   ++++F   D +  G I+  EL   LK +GS   E E+  +M+  D DK G I   EF       +    E  L  AF  +D+D +G I+ +E+       G+    +D    MIK +D D DG +++ EF +MM
Sbjct:  332 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTIDYGEFIAATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFGLDDIHIDD---MIKEIDQDNDGQIDYGEFAAMM 470          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK_DAUCA (Calcium-dependent protein kinase OS=Daucus carota PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 49/157 (31.21%), Postives = 80/157 (50.96%), Query Frame = 3
Query:    3 KRKALAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            K K LA    A+S  ++ I   + ++ +F   D +K G I+  EL + L  +GS   E E+ ++M+  D D +G I   EF  I  T      E+   +AF  +D+D +G I+ +EL   +   G+         +I  VD+D DG +N++EF +MM
Sbjct:  366 KLKQLALKVIAESLSEEEI---KGLKSMFANMDTDKSGTITYEELKSGLARLGSKLSEVEVQQLMDAADVDGNGTIDYLEF--ITATMHRHKLESYEHQAFQYFDKDNSGFITKDELESAMKEYGMGDEAT-IKDIISEVDSDNDGRINYDEFCAMM 516          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPKB_ARATH (Calcium-dependent protein kinase 11 OS=Arabidopsis thaliana GN=CPK11 PE=1 SV=1)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 46/141 (32.62%), Postives = 68/141 (48.23%), Query Frame = 3
Query:   60 VSREE---MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            +S EE   ++++F   D +  G I+  EL   LK +GS   E E+  +M+  D D  G I   EF       +    E  L  AF  +D+D +G I+ +EL       G+ C       MIK +D D DG ++F EF +MM
Sbjct:  324 LSEEEIGGLKELFKMIDTDNSGTITFEELKAGLKRVGSELMESEIKSLMDAADIDNSGTIDYGEFLAATLHMNKMEREEILVAAFSDFDKDGSGYITIDELQSACTEFGL-CDTP-LDDMIKEIDLDNDGKIDFSEFTAMM 462          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALL6_HUMAN (Calmodulin-like protein 6 OS=Homo sapiens GN=CALML6 PE=2 SV=2)

HSP 1 Score: 71.633 bits (174), Expect = 4.292e-12
Identity = 45/157 (28.66%), Postives = 74/157 (47.13%), Query Frame = 3
Query:   12 ALAATTEADSNRKQLIVSREEMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAG--EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 476
            A +  T  D   +      +E + +F  FD   +G++   EL  ++  +G +  + EL  + +D+D D  GF +   F  +       A   E+ELR AF ++D++  G I    L  VL   G   +      M+K  D DGD  +++EEF +MMT
Sbjct:   17 AESCQTTTDMTERLSAEQIKEYKGVFEMFDEEGNGEVKTGELEWLMSLLGINPTKSELASMAKDVDRDNKGFFNCDGFLALMGVYHEKAQNQESELRAAFRVFDKEGKGYIDWNTLKYVLMNAGEPLNEVEAEQMMKEADKDGDRTIDYEEFVAMMT 173          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: SCMC1_DANRE (Calcium-binding mitochondrial carrier protein SCaMC-1 OS=Danio rerio GN=slc25a24 PE=2 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 40/128 (31.25%), Postives = 68/128 (53.12%), Query Frame = 3
Query:   81 KIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 464
            ++F + D NKDGK+ ++EL T L +MG S  + E  +++   DTDKD  +   EF    +       E +LR  F   D++++G + A+E+   L  LGI  S      ++  +D DG   +++ E+R
Sbjct:   27 ELFEKLDVNKDGKVDVSELKTGLAAMGFSMGKGEAQKIVTSGDTDKDEGLDFEEFSKYLKEH-----EKKLRLTFKSLDKNEDGRVDAKEIQQSLKDLGINLSDKDAEKILHSIDVDGTMTLDWNEWR 149          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: POLC3_SYRVU (Polcalcin Syr v 3 OS=Syringa vulgaris GN=SYRV3 PE=1 SV=1)

HSP 1 Score: 71.2478 bits (173), Expect = 5.606e-12
Identity = 35/67 (52.24%), Postives = 48/67 (71.64%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG 272
            E+++IF +FDAN DGKIS +EL   LK++G S   EE+ R+M ++DTD DGFIS  EF+   R +SG
Sbjct:    7 ELERIFKRFDANGDGKISSSELGETLKTLG-SVTPEEIQRMMAEIDTDGDGFISFEEFKDFARANSG 72          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CML21_ORYSJ (Probable calcium-binding protein CML21 OS=Oryza sativa subsp. japonica GN=CML21 PE=2 SV=2)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 51/157 (32.48%), Postives = 80/157 (50.96%), Query Frame = 3
Query:   75 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFIS-------LSEFETICRTSSGAAG-------------EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVA----MIKPVDADGDGNVNFEEFRSMM 473
            ++++F  FD + DG I+  EL+  L  +G+     E       LD     +I+        +EFE +    +G  G             EA++REAF ++D+D +G ISA EL  VL+R+G+  +   C+A    MI   D D DG V++EEF++MM
Sbjct:   42 LRRVFEMFDRDGDGVITPAELSGALCRLGA---RGEAPPAAAALDAVVAAYIAPGMAGLRFAEFEALHAELAGLGGRQAVAAAEAEEEKEADMREAFGVFDEDGDGYISAAELQAVLSRMGLPEA--ACMARVRDMIAAADRDSDGRVDYEEFKAMM 193          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CDPK9_ARATH (Calcium-dependent protein kinase 9 OS=Arabidopsis thaliana GN=CPK9 PE=1 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 45/142 (31.69%), Postives = 70/142 (49.30%), Query Frame = 3
Query:   60 VSREEMQKI---FNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCV-AMIKPVDADGDGNVNFEEFRSMM 473
            +  EE+Q +   F   D +  G I+  EL   L  +GS   E E+ ++M+  D D +G I   EF T             L +AF  +D+D +G I+ +EL   L   G+    D  +  ++  VD+D DG +N+EEF +MM
Sbjct:  389 IDTEEIQGLKAMFANIDTDNSGTITYEELKEGLAKLGSKLTEAEVKQLMDAADVDGNGSIDYIEFITATMHRHRLESNENLYKAFQHFDKDSSGYITIDELESALKEYGM--GDDATIKEVLSDVDSDNDGRINYEEFCAMM 528          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALGL_BOTIN (Calglandulin OS=Bothrops insularis PE=2 SV=1)

HSP 1 Score: 70.8626 bits (172), Expect = 7.321e-12
Identity = 40/137 (29.20%), Postives = 68/137 (49.64%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRT--SSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMT 476
            E + IF  FD   +G +   +L +++  +G +  + +L  + +D+D DK G  +   F  +           + ELR AF ++D++  G I  + L  VL   G   +      M+K  D DGDG +++EEF +MMT
Sbjct:   12 EYKGIFEMFDEEGNGLVKTDDLESLMSLVGINPTKRDLANMAKDVDKDKKGTFNCDGFLALMGIYHEKSKNQDEELRAAFKVFDKEHKGYIEWDTLKYVLMNAGEPLNEQEAELMMKEADKDGDGTIDYEEFVAMMT 148          
The following BLAST results are available for this feature:
BLAST of FC925129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 319
Match NameE-valueIdentityDescription
CML40_ARATH4.292e-1229.25Probable calcium-binding protein CML40 OS=Arabidop... [more]
CDPK_SOYBN4.292e-1231.69Calcium-dependent protein kinase SK5 OS=Glycine ma... [more]
CDPK_DAUCA4.292e-1231.21Calcium-dependent protein kinase OS=Daucus carota ... [more]
CDPKB_ARATH4.292e-1232.62Calcium-dependent protein kinase 11 OS=Arabidopsis... [more]
CALL6_HUMAN4.292e-1228.66Calmodulin-like protein 6 OS=Homo sapiens GN=CALML... [more]
SCMC1_DANRE5.606e-1231.25Calcium-binding mitochondrial carrier protein SCaM... [more]
POLC3_SYRVU5.606e-1252.24Polcalcin Syr v 3 OS=Syringa vulgaris GN=SYRV3 PE=... [more]
CML21_ORYSJ7.321e-1232.48Probable calcium-binding protein CML21 OS=Oryza sa... [more]
CDPK9_ARATH7.321e-1231.69Calcium-dependent protein kinase 9 OS=Arabidopsis ... [more]
CALGL_BOTIN7.321e-1229.20Calglandulin OS=Bothrops insularis PE=2 SV=1[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YD17FM1 TF Citrus clementina cDNA clone KN0AAP8YD17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925129 ID=FC925129; Name=FC925129; organism=Citrus clementina; type=EST; length=686bp
GAAAAAGAAAAGCATTGGCAGCAACAACGGAGGCAGATTCGAATAGGAAA
CAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTCAACCAGTTCGA
CGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGA
AATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAG
GATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAAC
GATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGG
CGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTTCGGCGGAGGAG
TTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATG
TGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATT
TTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCG
CCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATT
AACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTC
TACTACTTTTAATGTTAATAAACTCTGATGCATTTTCAATGGTTTAAAAA
TTGGCTTACGATATTAAAAAAAAAAAAAAAAAAAAA
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