FC925129
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: SCMC2_XENLA (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus laevis GN=slc25a25 PE=2 SV=1) HSP 1 Score: 68.5514 bits (166), Expect = 3.633e-11 Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 3 Query: 75 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 464 +Q +F + D NKDG I + +LA LK +G E EL ++++ D D+DG + EF R E +LR F D+ +G I A+E+ L LG+ S ++K +D +G +++ E+R Sbjct: 61 LQILFQELDVNKDGAICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFDEFVHYLRDH-----EKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVNISEQQAEKILKSMDKNGTMTIDWNEWR 185
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: TNNC1_RABIT (Troponin C, slow skeletal and cardiac muscles OS=Oryctolagus cuniculus GN=TNNC1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 36/126 (28.57%), Postives = 66/126 (52.38%), Query Frame = 3 Query: 108 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473 +DG IS EL V++ +G + EEL +++++D D G + EF + + S E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++EF M Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: TNNC1_MOUSE (Troponin C, slow skeletal and cardiac muscles OS=Mus musculus GN=Tnnc1 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 36/126 (28.57%), Postives = 66/126 (52.38%), Query Frame = 3 Query: 108 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473 +DG IS EL V++ +G + EEL +++++D D G + EF + + S E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++EF M Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKMMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: TNNC1_HUMAN (Troponin C, slow skeletal and cardiac muscles OS=Homo sapiens GN=TNNC1 PE=1 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 36/126 (28.57%), Postives = 66/126 (52.38%), Query Frame = 3 Query: 108 KDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETIC----RTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473 +DG IS EL V++ +G + EEL +++++D D G + EF + + S E EL + F ++D++ +G I +EL ++L G + D ++K D + DG ++++EF M Sbjct: 32 EDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRCMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDEFLEFM 157
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: SCMC2_XENTR (Calcium-binding mitochondrial carrier protein SCaMC-2 OS=Xenopus tropicalis GN=slc25a25 PE=2 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 41/130 (31.54%), Postives = 67/130 (51.54%), Query Frame = 3 Query: 75 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFR 464 +Q +F + D NKDG I + +LA LK +G E EL ++++ D D+DG + EF R E +LR F D+ +G I A+E+ L LG+ S ++K +D +G +++ E+R Sbjct: 60 LQILFQELDVNKDGGICINDLAVGLKRLGVHRTELELRKIVKAGDKDQDGQLDFEEFVHYLRDH-----EKKLRLVFKSLDKKNDGRIDAQEIMQSLRDLGVNISEQQAEKILKSMDKNGTMTIDWNEWR 184
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_STRPU (Calmodulin (Fragment) OS=Strongylocentrotus purpuratus PE=3 SV=1) HSP 1 Score: 68.1662 bits (165), Expect = 4.745e-11 Identity = 34/66 (51.52%), Postives = 45/66 (68.18%), Query Frame = 3 Query: 282 EAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMMTT 479 E E+REAF ++D+D NG ISA EL V+ LG K + + MI+ D DGDG VN+EEF +MMT+ Sbjct: 14 EEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVAMMTS 79
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CML27_ORYSJ (Probable calcium-binding protein CML27 OS=Oryza sativa subsp. japonica GN=CML27 PE=2 SV=1) HSP 1 Score: 67.781 bits (164), Expect = 6.198e-11 Identity = 46/151 (30.46%), Postives = 74/151 (49.01%), Query Frame = 3 Query: 75 MQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSGAA----------------GEAELREAFDLYDQDKNGLISAEELNLVLNRLGI--KCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473 ++++F+ FD N DG+I+L E+A+ L ++G L + + +FE + R A E +++EAF ++D+D +G ISA EL VL +LG+ ++ MI VD D DG V+F EF+ MM Sbjct: 32 LRRVFDLFDRNGDGEITLDEMASALDALGLGADRAGLEATVGGYIPAGAAGLRFGDFEALHRALGDALFGPVEEEEPGKQGEDDDEGDMKEAFRVFDEDGDGFISAAELQAVLKKLGLPEARNLATVQEMICNVDRDCDGRVDFGEFKCMM 182
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: TNNC_BRALA (Troponin C OS=Branchiostoma lanceolatum PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 41/139 (29.50%), Postives = 72/139 (51.80%), Query Frame = 3 Query: 72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEA---ELREAFDLYDQDKNGLISAEELNLVLNR-LGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473 E + F+ FD + G IS EL T++K +G S EEL ++++++D D G I EF E + R + E ELR AF + D++ +G I +E + + G + D + + D + DG ++EE++ ++ Sbjct: 18 EFKMAFDMFDEDGGGDISTKELGTIMKRLGMSISREELQQMIDEVDEDASGTIDFEEFLEMMARAMQDSEREIPDDELRAAFRVLDKNGDGFIDKDEFRALASECAGDDLTDDELLEFMMDYDGNRDGRFDYEEWKEII 156
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: POLC3_OLEEU (Polcalcin Ole e 3 OS=Olea europaea GN=OLE3 PE=1 SV=1) HSP 1 Score: 67.3958 bits (163), Expect = 8.094e-11 Identity = 34/67 (50.75%), Postives = 45/67 (67.16%), Query Frame = 3 Query: 72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETICRTSSG 272 E ++IF +FDAN DGKIS +EL LK++G S EE+ R+M ++DTD DGFIS EF R + G Sbjct: 10 EHERIFKRFDANGDGKISSSELGETLKTLG-SVTPEEIQRMMAEIDTDGDGFISFEEFTVFARANRG 75 The following BLAST results are available for this feature:
BLAST of FC925129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 319
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925129 ID=FC925129; Name=FC925129; organism=Citrus clementina; type=EST; length=686bpback to top |