FC925129

Overview
NameFC925129
Unique NameFC925129
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length686
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Alignments
Feature NameTypeLocationAnalysis
Ccv1_Contig10226 contig Ccv1_Contig10226:52..737. BLAST: Citrus Unigene V1 Contigs to Prunus persica proteins V1
Homology
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_PLAFA (Calmodulin OS=Plasmodium falciparum PE=3 SV=4)

HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21
Identity = 56/135 (41.48%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++DTD +G I   EF T+  R       E EL EAF ++D+D +G ISA+EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_PLAF7 (Calmodulin OS=Plasmodium falciparum (isolate 3D7) GN=PF14_0323 PE=3 SV=2)

HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21
Identity = 56/135 (41.48%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++DTD +G I   EF T+  R       E EL EAF ++D+D +G ISA+EL  V+  LG K + +    MI+  D DGDG +N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEIDTDGNGTIDFPEFLTLMARKLKDTDTEEELIEAFRVFDRDGDGYISADELRHVMTNLGEKLTNEEVDEMIREADIDGDGQINYEEFVKMM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_DICDI (Calmodulin OS=Dictyostelium discoideum GN=calA PE=1 SV=3)

HSP 1 Score: 101.679 bits (252), Expect = 3.873e-21
Identity = 56/135 (41.48%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF T+  R       E E+REAF ++D+D NG ISA EL  V+  LG K + +    MI+  D DGDG VN++EF  MM
Sbjct:   14 EFKEAFSLFDKDGDGSITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGNIDFPEFLTMMARKMQDTDTEEEIREAFKVFDKDGNGYISAAELRHVMTSLGEKLTNEEVDEMIREADLDGDGQVNYDEFVKMM 148          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_TETPY (Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 56/135 (41.48%), Postives = 82/135 (60.74%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEFETI-CRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF ++  R       E EL EAF ++D+D NGLISA EL  V+  LG K + +    MI+  D DGDG++N+EEF  MM
Sbjct:   12 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLSLMARKMKDTDTEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGHINYEEFVRMM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_SPIOL (Calmodulin OS=Spinacia oleracea PE=1 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_MEDSA (Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_LILLO (Calmodulin OS=Lilium longiflorum PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_HORVU (Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_HELAN (Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
BLAST of FC925129 vs. ExPASy Swiss-Prot
Match: CALM_EUPCH (Calmodulin OS=Euphorbia characias PE=2 SV=4)

HSP 1 Score: 101.293 bits (251), Expect = 5.058e-21
Identity = 54/135 (40.00%), Postives = 81/135 (60.00%), Query Frame = 3
Query:   72 EMQKIFNQFDANKDGKISLTELATVLKSMGSSYKEEELVRVMEDLDTDKDGFISLSEF-ETICRTSSGAAGEAELREAFDLYDQDKNGLISAEELNLVLNRLGIKCSVDGCVAMIKPVDADGDGNVNFEEFRSMM 473
            E ++ F+ FD + DG I+  EL TV++S+G +  E EL  ++ ++D D +G I   EF   + R       E EL+EAF ++D+D+NG ISA EL  V+  LG K + +    MI+  D DGDG +N+EEF  +M
Sbjct:   12 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVKVM 146          
The following BLAST results are available for this feature:
BLAST of FC925129 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 319
Match NameE-valueIdentityDescription
CALM_PLAFA3.873e-2141.48Calmodulin OS=Plasmodium falciparum PE=3 SV=4[more]
CALM_PLAF73.873e-2141.48Calmodulin OS=Plasmodium falciparum (isolate 3D7) ... [more]
CALM_DICDI3.873e-2141.48Calmodulin OS=Dictyostelium discoideum GN=calA PE=... [more]
CALM_TETPY5.058e-2141.48Calmodulin OS=Tetrahymena pyriformis PE=1 SV=4[more]
CALM_SPIOL5.058e-2140.00Calmodulin OS=Spinacia oleracea PE=1 SV=2[more]
CALM_MEDSA5.058e-2140.00Calmodulin OS=Medicago sativa GN=CAL1 PE=2 SV=2[more]
CALM_LILLO5.058e-2140.00Calmodulin OS=Lilium longiflorum PE=2 SV=2[more]
CALM_HORVU5.058e-2140.00Calmodulin OS=Hordeum vulgare GN=CAM PE=2 SV=2[more]
CALM_HELAN5.058e-2140.00Calmodulin OS=Helianthus annuus GN=CAM PE=2 SV=3[more]
CALM_EUPCH5.058e-2140.00Calmodulin OS=Euphorbia characias PE=2 SV=4[more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YD17FM1 TF Citrus clementina cDNA clone KN0AAP8YD17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925129 ID=FC925129; Name=FC925129; organism=Citrus clementina; type=EST; length=686bp
GAAAAAGAAAAGCATTGGCAGCAACAACGGAGGCAGATTCGAATAGGAAA
CAGCTAATAGTGAGCCGGGAGGAGATGCAGAAGATCTTCAACCAGTTCGA
CGCGAACAAGGACGGCAAGATCTCGCTGACGGAGCTGGCGACCGTTTTGA
AATCAATGGGATCGAGCTACAAAGAGGAGGAGCTCGTCCGCGTCATGGAG
GATCTCGATACCGACAAGGACGGATTCATCAGCCTGTCGGAGTTCGAAAC
GATCTGCCGGACCTCCTCTGGTGCCGCCGGCGAGGCCGAGCTCCGCGAGG
CGTTTGATCTCTACGATCAGGACAAGAACGGCTTGATTTCGGCGGAGGAG
TTGAATTTGGTGTTGAACAGGCTCGGAATTAAGTGCTCGGTTGATGGATG
TGTGGCGATGATTAAGCCGGTGGATGCCGATGGTGATGGCAATGTGAATT
TTGAAGAGTTTCGTTCGATGATGACTACTTCTCTTAAACCTGGTCCTGCG
CCGTAGATTTTGGTTTCGACGGTGATTCGATGGTCGGCCGTACCGATATT
AACTTGCGTCCGTTTATAGGCTGTCGTTTTCCTCCGTGCCTACTTGTGTC
TACTACTTTTAATGTTAATAAACTCTGATGCATTTTCAATGGTTTAAAAA
TTGGCTTACGATATTAAAAAAAAAAAAAAAAAAAAA
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