FC925135
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHI6_POPTR (Acidic endochitinase WIN6 OS=Populus trichocarpa GN=WIN6 PE=2 SV=2) HSP 1 Score: 272.707 bits (696), Expect = 1.586e-72 Identity = 132/234 (56.41%), Postives = 157/234 (67.09%), Query Frame = 1 Query: 67 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKGWNN 765 GG + G G D G D G L II + F+ LL +RND RC A GFYTY+AFI AAK FP FGN+G++ MRKREIAAF QT HETTGGWPDAP G YAWGYCY+++++ + G QY GRGPIQL+WN NY CG+ L + LL P+L+ TDPV+SFK+AIWFWM Q PKPSCH VI W PSA D+ A R+PGYG+ TN INGGIE G+G N Sbjct: 63 GGGGGDGGDDGCDGGDDGGGDGDDGYLSDIIPKSKFDALLKFRNDARCPAAGFYTYNAFISAAKEFPDFGNTGDDLMRKREIAAFLGQTSHETTGGWPDAPCGPYAWGYCYLKEINCQPYCDPSSNYQCVAGKQYCGRGPIQLSWNYNYGLCGDDLKLPLLQEPELVETDPVISFKTAIWFWMKPQSPKPSCHAVITGNWTPSAADLEAGRVPGYGVITNIINGGIECGQGGPN 296
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHIT_CARPA (Endochitinase OS=Carica papaya PE=1 SV=1) HSP 1 Score: 272.322 bits (695), Expect = 2.071e-72 Identity = 125/206 (60.68%), Postives = 156/206 (75.73%), Query Frame = 1 Query: 151 KIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXL-PGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKGWN 762 KIISR MF+ +L +RN+ C A+GFYTYDAF+ AAK+FP+FG +G+ +RKRE+AAF QT HETTGGWP AP G YAWGYC++++ + S+ PG+ YYGRGP+QL+WN NY CGEAL V+LL NPDL+ATD VLSFK+A+WFWMT Q PKPSCH+V+ W+PSA D A RLPGYG+ TN +NGG+E GKG N Sbjct: 4 KIISRSMFDQMLKHRNNPACPAKGFYTYDAFLAAAKSFPSFGTTGSTDVRKRELAAFLGQTSHETTGGWPSAPDGPYAWGYCFLKERNPSSNYCAPSPRYPCAPGKSYYGRGPLQLSWNYNYGPCGEALRVNLLGNPDLVATDRVLSFKTALWFWMTPQAPKPSCHDVLTGRWQPSAADTAAGRLPGYGVLTNLLNGGLECGKGPN 209
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHIB_ARATH (Basic endochitinase B OS=Arabidopsis thaliana GN=CHI-B PE=1 SV=3) HSP 1 Score: 271.166 bits (692), Expect = 4.615e-72 Identity = 124/208 (59.62%), Postives = 152/208 (73.08%), Query Frame = 1 Query: 139 GELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKG 756 G+L IIS F+D+L +RND C ARGFYTY+AFI AAK+FP FG +G+ RK+E+AAFF QT HETTGGW AP G Y+WGYC+ ++ + SD +YYGRGP+QL+WN NY CG A+GVDLLNNPDL+A D V++FK+AIWFWMTAQPPKPSCH VI +W+PS D A RLPGYG+ TN INGG+E G+G Sbjct: 84 GDLSGIISSSQFDDMLKHRNDAACPARGFYTYNAFITAAKSFPGFGTTGDTATRKKEVAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPASDYCEPSATWPCASGKRYYGRGPMQLSWNYNYGLCGRAIGVDLLNNPDLVANDAVIAFKAAIWFWMTAQPPKPSCHAVIAGQWQPSDADRAAGRLPGYGVITNIINGGLECGRG 291
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHI2_BRANA (Endochitinase CH25 OS=Brassica napus PE=2 SV=1) HSP 1 Score: 270.781 bits (691), Expect = 6.027e-72 Identity = 126/225 (56.00%), Postives = 157/225 (69.78%), Query Frame = 1 Query: 88 GSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXLPG--QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKG 756 G + CG G G+L IISR F+D+L +RND C ARGFYTYDAFI AAK+FP FG +G+ RK+EIAAFF QT HETTGGW AP G Y+WGYC+ ++ + S+ YYGRGP+QL+WN NY +CG A+G DLLNNPDL++ DPV++FK+AIWFWMT Q PKPSCH VI+ +W+PS D A R+PGYG+ TN INGG+E G+G Sbjct: 55 GCQSQCGGTPPG---PTGDLSGIISRSQFDDMLKHRNDNACPARGFYTYDAFINAAKSFPGFGTTGDTATRKKEIAAFFGQTSHETTGGWATAPDGPYSWGYCFKQEQNPSSNYCSPSAEWPCASGKSYYGRGPMQLSWNYNYGQCGRAIGSDLLNNPDLVSNDPVIAFKAAIWFWMTPQSPKPSCHAVIVGQWQPSDADRAAGRVPGYGVITNIINGGLECGRG 276
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHI2_GOSHI (Endochitinase 2 (Fragment) OS=Gossypium hirsutum PE=2 SV=2) HSP 1 Score: 270.011 bits (689), Expect = 1.028e-71 Identity = 137/236 (58.05%), Postives = 161/236 (68.22%), Query Frame = 1 Query: 67 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGG--WPDAPGGEYAWGYCYIRQVSHGSDXXXXXXXXXL-PG-QYYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKGWN 762 G +Q GSG G G L +ISRE F +L +RND C ARGFYTYDAFI AA++FPAF +G++ RKREIAAF AQT HETTGG W AP G YAWGYCY R+++ S PG QY+GRGP+QL+WN NY +CG A+GVDLLNNPDLL++DP +SFKSA WFWMT Q PKPSCH VII W PS++D A R GYG+ TN INGG+E GKGWN Sbjct: 35 GCQSQCSGSGPAPGP---------GGLTNLISRETFNQMLLHRNDGACPARGFYTYDAFIAAARSFPAFATTGDQATRKREIAAFLAQTSHETTGGAGWA-APDGPYAWGYCYNRELNPPSSYCASDPNYPCAPGKQYFGRGPMQLSWNYNYGQCGRAIGVDLLNNPDLLSSDPTISFKSAFWFWMTPQSPKPSCHNVIIGAWSPSSSDRAAGRATGYGVITNIINGGLECGKGWN 260
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHI1_SOLTU (Endochitinase 1 (Fragment) OS=Solanum tuberosum GN=CHTB1 PE=2 SV=1) HSP 1 Score: 270.011 bits (689), Expect = 1.028e-71 Identity = 133/233 (57.08%), Postives = 162/233 (69.53%), Query Frame = 1 Query: 67 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKG 756 G + CG G C + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGWP AP G YAWGYC++R Q S G PG+ Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A+R+PG+G+ TN INGG+E G G Sbjct: 43 GDTNDYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGVDQAANRVPGFGVITNIINGGLECGHG 274
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHIC_SOLLC (Basic 30 kDa endochitinase OS=Solanum lycopersicum GN=CHI9 PE=1 SV=1) HSP 1 Score: 269.24 bits (687), Expect = 1.754e-71 Identity = 131/233 (56.22%), Postives = 162/233 (69.53%), Query Frame = 1 Query: 67 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKG 756 G + + CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AF+ AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYC++R Q S G PG+ Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATDPV+SFKSAIWFWMT Q PKPSCH+VI W+PS D A+R+PG+G+ TN INGG+E G G Sbjct: 47 GNTNEYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFVTAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPTAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDPVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHG 278
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHI3_TOBAC (Endochitinase 3 OS=Nicotiana tabacum GN=CHN14 PE=3 SV=1) HSP 1 Score: 267.314 bits (682), Expect = 6.664e-71 Identity = 133/243 (54.73%), Postives = 163/243 (67.08%), Query Frame = 1 Query: 67 GGSAQNCGSGAVCGERDTGHG--------TDG---GELGKIISREMFEDLLPYRNDERCHARGFYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIRQVSHG-SDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKG 756 G + CG G + +G G T G G++ IIS MF+ +L +RND C + FYTY+AFI AA++F FG +G+ T RKRE+AAFFAQT HETTGGW AP G YAWGYCY+R+ + S PGQ YYGRGPIQ+++N NY CG A+G +LLNNPDL+AT+ V+SFKSAIWFWMTAQ PKPSCH+VI W PSA D A+RLPGYG+ TN INGG+E G G Sbjct: 48 GNTQDYCGPGKCQSQCPSGPGPTPRPPTPTPGPSTGDISNIISSSMFDQMLKHRNDNTCQGKSFYTYNAFITAARSFRGFGTTGDTTRRKREVAAFFAQTSHETTGGWDTAPDGRYAWGYCYLREQGNPPSYCVQSSQWPCAPGQKYYGRGPIQISYNYNYGPCGRAIGQNLLNNPDLVATNAVVSFKSAIWFWMTAQSPKPSCHDVITGRWTPSAADRAANRLPGYGVITNIINGGLECGHG 290
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHI3_SOLTU (Endochitinase 3 (Fragment) OS=Solanum tuberosum GN=CHTB3 PE=2 SV=1) HSP 1 Score: 266.544 bits (680), Expect = 1.137e-70 Identity = 131/233 (56.22%), Postives = 160/233 (68.67%), Query Frame = 1 Query: 67 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKG 756 G + CG G C + G G+LG +IS MF+ +L +RND C + FY+Y+AFI AA +FP FG +G+ T RKREIAAF AQT HETTGGWP AP G YAWGYC++R Q S G PG+ Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD V+SFKSAIWFWMT Q PKPSCH+VI W+PS D A+R+PG+G+ TN INGG+E G G Sbjct: 43 GNTNDYCGPGN-CQSQCPGGPGPSGDLGGVISNSMFDQMLNHRNDNACQGKNNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFLAQTSHETTGGWPSAPDGPYAWGYCFLREQGSPGDYCTPSSQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSVISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGADQAANRVPGFGVITNIINGGLECGHG 274
BLAST of FC925135 vs. ExPASy Swiss-Prot
Match: CHI2_SOLTU (Endochitinase 2 (Fragment) OS=Solanum tuberosum GN=CHTB2 PE=2 SV=1) HSP 1 Score: 265.003 bits (676), Expect = 3.307e-70 Identity = 130/233 (55.79%), Postives = 160/233 (68.67%), Query Frame = 1 Query: 67 GGSAQNCGSGAVCGERDTGHGTDGGELGKIISREMFEDLLPYRNDERCHARG-FYTYDAFIEAAKAFPAFGNSGNETMRKREIAAFFAQTGHETTGGWPDAPGGEYAWGYCYIR-QVSHGSDXXXXXXXXXLPGQ-YYGRGPIQLTWNCNYLRCGEALGVDLLNNPDLLATDPVLSFKSAIWFWMTAQPPKPSCHEVIIDEWKPSANDVNASRLPGYGLTTNKINGGIESGKG 756 G + CG G + G G+LG +IS MF+ +L +RND C +G FY+Y+AFI AA +FP FG +G+ T RKREIAAFFAQT HETTGGW AP G YAWGYC++R Q S G PG+ Y+GRGPIQ++ N NY CG A+GVDLLNNPDL+ATD ++SFKSAIWFWMT Q PKPSCH+VI W+PS D A+R+PG+G+ TN INGG+E G G Sbjct: 43 GNTNDYCGPGNCQSQCPGG---SPGDLGGVISNSMFDQMLNHRNDNACQGKGNFYSYNAFISAAGSFPGFGTTGDITARKREIAAFFAQTSHETTGGWASAPDGPYAWGYCFLREQGSPGDYCTPSNQWPCAPGRKYFGRGPIQISHNYNYGPCGRAIGVDLLNNPDLVATDSIISFKSAIWFWMTPQSPKPSCHDVITGRWQPSGTDQAANRVPGFGVITNIINGGLECGHG 272 The following BLAST results are available for this feature:
BLAST of FC925135 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 55
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925135 ID=FC925135; Name=FC925135; organism=Citrus clementina; type=EST; length=780bpback to top |