FC925138
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPAJ1_JUNVI (Major pollen allergen Jun v 1 OS=Juniperus virginiana PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.218e-32 Identity = 61/110 (55.45%), Postives = 80/110 (72.73%), Query Frame = 3 Query: 384 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG 713 SC + NPID CWR D NW +NR +LADC +GFG + +GG+ G FY VT DD+PVNP PGTLR+ ++K LWI+F ++M I+LK L V +T+DGRGA+VH+ NGG Sbjct: 18 SCCSDNPIDSCWRGDSNWGQNRMKLADCAVGFGSSTMGGKGGDFYTVTSA-DDNPVNPTPGTLRYGATREKTLWIIFSQNMNIKLKMPLYVAGHKTIDGRGADVHLGNGG 126
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPAC1_CHAOB (Major pollen allergen Cha o 1 OS=Chamaecyparis obtusa PE=1 SV=1) HSP 1 Score: 138.658 bits (348), Expect = 3.218e-32 Identity = 62/118 (52.54%), Postives = 84/118 (71.19%), Query Frame = 3 Query: 384 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG-CITIQFV 734 SC + NPID CWR D NW +NR +LADC +GFG +A+GG+ G FY VT DDDPVNP PGTLR+ +++ LWI+F +++ I+L L + +T+DGRGA VHI NGG C+ ++ V Sbjct: 18 SCFSDNPIDSCWRGDANWDQNRMKLADCAVGFGSSAMGGKGGAFYTVTS-SDDDPVNPAPGTLRYGATRERSLWIIFSKNLNIKLNMPLYIAGNKTIDGRGAEVHIGNGGPCLFMRTV 134
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPA12_AMBAR (Pollen allergen Amb a 1.2 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 137.887 bits (346), Expect = 5.490e-32 Identity = 67/134 (50.00%), Postives = 84/134 (62.69%), Query Frame = 3 Query: 312 PDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG 713 P A VE ++ E R+ +C N ID CWRC +W NR+ LADC GF + GG+ G Y VT +DDD NPK GTLR A Q++PLWI+FKR+MVI L QEL+VNS +T+DGRG V+I N G Sbjct: 22 PVRSAEDVEEFLPSANETRR-SLKACEAHNIIDKCWRCKADWANNRQALADCAQGFAKGTYGGKHGDVYTVTSDKDDDVANPKEGTLRFAAAQNRPLWIIFKRNMVIHLNQELVVNSDKTIDGRGVKVNIVNAG 154
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPA14_AMBAR (Pollen allergen Amb a 1.4 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 137.117 bits (344), Expect = 9.364e-32 Identity = 67/134 (50.00%), Postives = 85/134 (63.43%), Query Frame = 3 Query: 312 PDEIASMVEMSTRNSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG 713 P A ++ ++ E R L +CGT N ID CWR +W +NRK LADC GF + IGG+DG Y VT DDD NPK GTLR Q++PLWI+F RDMVI+L +EL +N+ +T+DGRGA V I N G Sbjct: 22 PVRSAEDLQQILPSANETRSLT--TCGTYNIIDGCWRGKADWAENRKALADCAQGFAKGTIGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFARDMVIRLDRELAINNDKTIDGRGAKVEIINAG 153
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPA11_AMBAR (Pollen allergen Amb a 1.1 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 135.961 bits (341), Expect = 2.086e-31 Identity = 61/108 (56.48%), Postives = 76/108 (70.37%), Query Frame = 3 Query: 390 GTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG 713 G N ID CWR +W +NRK LADC GFG+ +GG+DG Y VT DDD NPK GTLR Q++PLWI+F+RDMVI+L +E++VNS +T+DGRGA V I N G Sbjct: 45 GAYNIIDGCWRGKADWAENRKALADCAQGFGKGTVGGKDGDIYTVTSELDDDVANPKEGTLRFGAAQNRPLWIIFERDMVIRLDKEMVVNSDKTIDGRGAKVEIINAG 152
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPAA2_AMBAR (Pollen allergen Amb a 2 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 132.494 bits (332), Expect = 2.306e-30 Identity = 62/121 (51.24%), Postives = 80/121 (66.12%), Query Frame = 3 Query: 351 NSTERRKLGYFSCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG 713 N T R G C N ID CWRC +W +NR+ L +C GFG+ GG+ G Y+VT +DDD VNPK GTLR QD+PLWI+F+RDM+I L+QE++V S +T+DGRGA V + GG Sbjct: 36 NDTRRSLQG---CEAHNIIDKCWRCKPDWAENRQALGNCAQGFGKATHGGKWGDIYMVTSDQDDDVVNPKEGTLRFGATQDRPLWIIFQRDMIIYLQQEMVVTSDKTIDGRGAKVELVYGG 153
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPA13_AMBAR (Pollen allergen Amb a 1.3 OS=Ambrosia artemisiifolia PE=1 SV=1) HSP 1 Score: 130.954 bits (328), Expect = 6.711e-30 Identity = 61/110 (55.45%), Postives = 72/110 (65.45%), Query Frame = 3 Query: 384 SCGTGNPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG 713 +C N ID CWR +W NR+ LADC GF + GG+ G Y VT DDD NPK GTLR A Q++PLWI+FK DMVI L QEL+VNS +T+DGRG V I NGG Sbjct: 44 ACEALNIIDKCWRGKADWENNRQALADCAQGFAKGTYGGKWGDVYTVTSNLDDDVANPKEGTLRFAAAQNRPLWIIFKNDMVINLNQELVVNSDKTIDGRGVKVEIINGG 153
BLAST of FC925138 vs. ExPASy Swiss-Prot
Match: MPAC1_CUPAR (Major pollen allergen Cup a 1 OS=Cupressus arizonica PE=1 SV=1) HSP 1 Score: 129.413 bits (324), Expect = 1.953e-29 Identity = 56/105 (53.33%), Postives = 76/105 (72.38%), Query Frame = 3 Query: 399 NPIDDCWRCDGNWHKNRKRLADCGIGFGRNAIGGRDGRFYVVTDPRDDDPVNPKPGTLRHAVIQDKPLWIVFKRDMVIQLKQELIVNSFQTLDGRGANVHIANGG 713 NPID CWR D NW +NR +LADC +GFG + +GG+ G Y VT +D+PVNP PGTLR+ ++K LWI+F ++M I+L+ L V ++T+DGRGA VH+ NGG Sbjct: 2 NPIDSCWRGDSNWDQNRMKLADCVVGFGSSTMGGKGGEIYTVTSS-EDNPVNPTPGTLRYGATREKALWIIFSQNMNIKLQMPLYVAGYKTIDGRGAVVHLGNGG 105 The following BLAST results are available for this feature:
BLAST of FC925138 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 38
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925138 ID=FC925138; Name=FC925138; organism=Citrus clementina; type=EST; length=735bpback to top |