FC925143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: PTI6_SOLLC (Pathogenesis-related genes transcriptional activator PTI6 OS=Solanum lycopersicum GN=PTI6 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.998e-16 Identity = 58/179 (32.40%), Postives = 88/179 (49.16%), Query Frame = 3 Query: 57 HQDHEALTLERISQYLLNDLTPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLE-IGEISLDSDEVQQVDCGKKRKYEENE 590 H + L+R+ + +L D DS S DE +T+ + K + + P T SI K + +D + + +RGVR+RPWG++AAEIRDP + G RVWLGT++T EAA YD AA K++G A+ NFP+ E+++ E + EN+ Sbjct: 26 HNEKSNSELQRVVRIILTDADATDS-------------SDDEG------RNTVRRVKRHVTEINLMPSTKSIGDRKRRSVSPD-SDVTRRKKFRGVRQRPWGRWAAEIRDPTR-GKRVWLGTYDTPEEAAVVYDKAAVKLKGPDAVTNFPVSTTAEVTVTVTETETESVADGGDKSEND 183
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF76_ARATH (Ethylene-responsive transcription factor 11 OS=Arabidopsis thaliana GN=ERF11 PE=2 SV=1) HSP 1 Score: 86.2705 bits (212), Expect = 1.998e-16 Identity = 41/58 (70.69%), Postives = 47/58 (81.03%), Query Frame = 3 Query: 333 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 506 YRGVR+RPWG+YAAEIRDP KK +RVWLGTF+T EAA+AYD A + RG KA NFP Sbjct: 20 YRGVRKRPWGRYAAEIRDPFKK-SRVWLGTFDTPEEAARAYDKRAIEFRGAKAKTNFP 76
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: CRF4_ARATH (Ethylene-responsive transcription factor CRF4 OS=Arabidopsis thaliana GN=CRF4 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16 Identity = 39/63 (61.90%), Postives = 50/63 (79.37%), Query Frame = 3 Query: 324 ERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLE 512 ++ YRGVR+RPWGK+AAEIRDP ++ R+WLGTF TA EAA YDNAA K+RG A+ NF ++ Sbjct: 114 QKKYRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFATAEEAAIVYDNAAIKLRGPDALTNFTVQ 175
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: CRF2_ARATH (Ethylene-responsive transcription factor CRF2 OS=Arabidopsis thaliana GN=CRF2 PE=2 SV=1) HSP 1 Score: 84.7297 bits (208), Expect = 5.812e-16 Identity = 39/60 (65.00%), Postives = 49/60 (81.67%), Query Frame = 3 Query: 324 ERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 503 E+ +RGVR+RPWGK+AAEIRDP K+ R+WLGT+NTA EAA YDNAA ++RG A+ NF Sbjct: 119 EKKFRGVRQRPWGKWAAEIRDPLKR-VRLWLGTYNTAEEAAMVYDNAAIQLRGPDALTNF 177
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF56_ARATH (Ethylene-responsive transcription factor ERF056 OS=Arabidopsis thaliana GN=ERF056 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16 Identity = 64/164 (39.02%), Postives = 81/164 (49.39%), Query Frame = 3 Query: 105 LNDLTPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGE----ISLDSDEVQQVDCGKKRKYEE 584 LN LTP + + L + ST+S P+ I ++ P+TS + K+L YRGVR+R WGK+ AEIR P K TR+WLGTF TA +AA AYD AAF++RG A LNFP I E + D Q C RK EE Sbjct: 25 LNQLTPYQIHQIQNQLNHRR--------------STISNLSPNRIRMKNLTPSTS------KTKNL----------YRGVRQRHWGKWVAEIRLP-KNRTRLWLGTFETAEKAALAYDQAAFQLRGDIAKLNFPNLIHEDMNPLPSSVDTKLQAICKSLRKTEE 157
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF53_ARATH (Ethylene-responsive transcription factor ERF053 OS=Arabidopsis thaliana GN=ERF053 PE=2 SV=1) HSP 1 Score: 84.3445 bits (207), Expect = 7.591e-16 Identity = 56/133 (42.11%), Postives = 69/133 (51.88%), Query Frame = 3 Query: 333 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEISLDSDE---VQQVDC-------GKKRKYEENEEFERKVAVKKEETVSGGVGLGPLTPSSW---TGFWDD 692 YRGVR+R WGK+ AEIR P + TR+WLGTF+TA EAA AYD AFK+RG A LNFP E+ L+ E V Q C R+ E++ V EET + P W + WDD Sbjct: 187 YRGVRQRHWGKWVAEIRKPRNR-TRLWLGTFDTAEEAAMAYDREAFKLRGETARLNFP----ELFLNKQEPTPVHQKQCETGTTSEDSSRRGEDDSSTALAVGGVSEETGWAEAWFNAI-PEEWGPGSPLWDD 313
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: RAP29_ARATH (Ethylene-responsive transcription factor RAP2-9 OS=Arabidopsis thaliana GN=RAP2-9 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16 Identity = 37/64 (57.81%), Postives = 50/64 (78.12%), Query Frame = 3 Query: 324 ERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEI 515 E+ Y+G+R R WGK+ AEIR+PNK+ +R+WLG++ TAV AA+AYD A F +RG A LNFP E+ Sbjct: 33 EKRYKGIRMRKWGKWVAEIREPNKR-SRIWLGSYKTAVAAARAYDTAVFYLRGPSARLNFPEEV 95
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF55_ARATH (Ethylene-responsive transcription factor ERF055 OS=Arabidopsis thaliana GN=ERF055 PE=2 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.914e-16 Identity = 53/133 (39.85%), Postives = 71/133 (53.38%), Query Frame = 3 Query: 333 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP---LEIGEISLDSDEVQQVDCGKKRKYE------ENEEFERKVAVKKEETVSGGVGLGPLTPSSWTGFWD-DGNG 701 YRGVR+R WGK+ AEIR P + TR+WLGTF+TA EAA AYD AAFK+RG A LNFP + G D+ E + K E +N+ + + +K + P P +G + DG+G Sbjct: 143 YRGVRQRHWGKWVAEIRLPRNR-TRLWLGTFDTAEEAALAYDRAAFKLRGDSARLNFPALRYQTGSSPSDTGEYGPIQAAVDAKLEAILAEPKNQPGKTERTSRKRAKAAASSAEQPSAPQQHSGSGESDGSG 274
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: CRF5_ARATH (Ethylene-responsive transcription factor CRF5 OS=Arabidopsis thaliana GN=CRF5 PE=2 SV=1) HSP 1 Score: 82.8037 bits (203), Expect = 2.209e-15 Identity = 55/146 (37.67%), Postives = 75/146 (51.37%), Query Frame = 3 Query: 117 TPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERH-----------------YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 503 TP D + I + +P +TD SS+ + S+ R+ I R DED + + A K++ YRGVR+RPWGK+AAEIRDP+ + TR+WLGTF TA EAA YD AA +++G A NF Sbjct: 19 TPFDGFPKIVKIIVTDPCATD--------SSSDEENDNKSVAPRVKRYVDEI-RFCDEDDEPKPARKAKKKSPAAAAENGGDLVKSVVKYRGVRQRPWGKFAAEIRDPSSR-TRLWLGTFATAEEAAIGYDRAAIRIKGHNAQTNF 154
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: TINY_ARATH (Ethylene-responsive transcription factor TINY OS=Arabidopsis thaliana GN=TINY PE=2 SV=1) HSP 1 Score: 82.4185 bits (202), Expect = 2.885e-15 Identity = 59/157 (37.58%), Postives = 82/157 (52.23%), Query Frame = 3 Query: 285 DEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEI----SLDSDEVQQVDCGKKRKYEENEEFERKVAVKKEETVSGGVGLGPLTPSSWTGFWDDGNGIFSVPPLSPCFGQL 743 +E+K V D K YRGVR+R WGK+ +EIR+P KK +R+WLGTF + AA+A+D AA ++G AILNFP G SL ++ QV K E ++ F ++ + S L L SS TG + G I +P L + L Sbjct: 20 EEEKKKPVKDSGKHPVYRGVRKRNWGKWVSEIREPRKK-SRIWLGTFPSPEMAARAHDVAALSIKGASAILNFPDLAGSFPRPSSLSPRDI-QVAALKAAHMETSQSFSSSSSLTFSSSQSSS-SLESLVSSSATGSEELGE-IVELPSLGSSYDGL 172 The following BLAST results are available for this feature:
BLAST of FC925143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925143 ID=FC925143; Name=FC925143; organism=Citrus clementina; type=EST; length=757bpback to top |