FC925143
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF54_ARATH (Ethylene-responsive transcription factor ERF054 OS=Arabidopsis thaliana GN=ERF054 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15 Identity = 60/181 (33.15%), Postives = 81/181 (44.75%), Query Frame = 3 Query: 111 DLTPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEI-----------------------GEISLDSDEVQQVDCGKKRKYEE 584 D T IS PQQ +Q + Q S TL+ + P + + E +A + YRGVR+R WGK+ AEIR P + R+WLGTF+TA EAA AYD AFK+RG A LNFP E++L+S E+ +D G++ E Sbjct: 85 DPTMQGQKQMISFSPQQQ--QQQQQYMAQYWSDTLN----------LSPRGRMMMMMSQEAVQPYIAT----KLYRGVRQRQWGKWVAEIRKPRSRA-RLWLGTFDTAEEAAMAYDRQAFKLRGHSATLNFPEHFVNKESELHDSNSSDQKEPETPQPSEVNLESKELPVIDVGREEGMAE 248
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: CRF3_ARATH (Ethylene-responsive transcription factor CRF3 OS=Arabidopsis thaliana GN=CRF3 PE=2 SV=1) HSP 1 Score: 82.0333 bits (201), Expect = 3.767e-15 Identity = 37/61 (60.66%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 327 RHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPL 509 + +RGVR+RPWGK+AAEIRDP ++ R+WLGTF TA EAA YDNAA ++RG A+ NF + Sbjct: 123 KKFRGVRQRPWGKWAAEIRDPEQR-RRIWLGTFETAEEAAVVYDNAAIRLRGPDALTNFSI 182
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ESR1_ARATH (Ethylene-responsive transcription factor ESR1 OS=Arabidopsis thaliana GN=ESR1 PE=1 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14 Identity = 53/113 (46.90%), Postives = 64/113 (56.64%), Query Frame = 3 Query: 180 EQILVQKTSSTLSQRKPSSINVRIPPPTTSIF----RLKDEDKDLEVAD-DYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 503 E+ L T ST S P+ + PT S +L +D + +A YRGVRRRPWG+YAAEIRDP K R WLGTF+TA +AA AYD+AA RG KA NF Sbjct: 2 EKALRNFTESTHSP-DPNPLTKFFTEPTASPVSRNRKLSSKDTTVTIAGAGSSTTRYRGVRRRPWGRYAAEIRDPMSKERR-WLGTFDTAEQAACAYDSAARAFRGAKARTNF 112
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF43_ARATH (Ethylene-responsive transcription factor ERF043 OS=Arabidopsis thaliana GN=ERF043 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14 Identity = 39/76 (51.32%), Postives = 52/76 (68.42%), Query Frame = 3 Query: 279 LKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 506 + D D E ++ K+ YRGVR R WGK+ +EIR+P KK +R+WLGTF TA A +A+D AA ++G AILNFP Sbjct: 1 MADSSSDKEKKENNKQPVYRGVRMRSWGKWVSEIREPRKK-SRIWLGTFPTAEMAMRAHDVAAMSIKGTSAILNFP 75
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF36_ARATH (Ethylene-responsive transcription factor ERF036 OS=Arabidopsis thaliana GN=ERF036 PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14 Identity = 45/130 (34.62%), Postives = 70/130 (53.85%), Query Frame = 3 Query: 117 TPMDSYSFISNLPQQNPASTDEQILVQKTSSTLSQRKPSSINVRIPPPTTSIFRLKDEDKDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 506 T + + +++ +S+D+ TS+ LS+ + PP + + + + + + YRGVR R WGK+ +EIR P KK TR+WLGTF TA AA+A+D AA ++G A+LNFP Sbjct: 14 TRVQKMTSLNSSASPTSSSSDQSDATTTTSTHLSEEEA-------PPRNNNTRKRRRDSSSASSSSSMQHPVYRGVRMRSWGKWVSEIRQPRKK-TRIWLGTFVTADMAARAHDVAALTIKGSSAVLNFP 135
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: DRE2G_ARATH (Dehydration-responsive element-binding protein 2G OS=Arabidopsis thaliana GN=DREB2G PE=2 SV=1) HSP 1 Score: 80.4925 bits (197), Expect = 1.096e-14 Identity = 38/56 (67.86%), Postives = 47/56 (83.93%), Query Frame = 3 Query: 333 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILN 500 +RGVR+R WGK+ AEIR+PN+ GTR+WLGTFNT+VEAA AYD AA K+ G +A LN Sbjct: 34 FRGVRQRTWGKWVAEIREPNR-GTRLWLGTFNTSVEAAMAYDEAAKKLYGHEAKLN 88
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: LEP_ARATH (Ethylene-responsive transcription factor LEP OS=Arabidopsis thaliana GN=LEP PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14 Identity = 42/70 (60.00%), Postives = 47/70 (67.14%), Query Frame = 3 Query: 294 KDLEVADDYKERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 503 K + DD + GVRRRPWG+YAAEIRDP K R WLGTF+TA EAA AYD AA MRG +A NF Sbjct: 7 KSKKKQDDQVGTRFLGVRRRPWGRYAAEIRDPTTK-ERHWLGTFDTAEEAALAYDRAARSMRGTRARTNF 75
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ESR2_ARATH (Ethylene-responsive transcription factor ESR2 OS=Arabidopsis thaliana GN=ESR2 PE=1 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.432e-14 Identity = 42/57 (73.68%), Postives = 44/57 (77.19%), Query Frame = 3 Query: 333 YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNF 503 YRGVRRRPWG+YAAEIRDP K R WLGTF+TA EAA AYD AA MRG KA NF Sbjct: 58 YRGVRRRPWGRYAAEIRDPLSKERR-WLGTFDTAEEAACAYDCAARAMRGLKARTNF 113
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF60_ARATH (Ethylene-responsive transcription factor ERF060 OS=Arabidopsis thaliana GN=ERF060 PE=2 SV=1) HSP 1 Score: 79.7221 bits (195), Expect = 1.870e-14 Identity = 40/61 (65.57%), Postives = 48/61 (78.69%), Query Frame = 3 Query: 324 ERHYRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFP 506 ++ YRGVR+R WGK+ AEIR P K TR+WLGTF+TA EAA AYD AA+K+RG A LNFP Sbjct: 90 QKLYRGVRQRHWGKWVAEIRLP-KNRTRLWLGTFDTAEEAAMAYDLAAYKLRGEFARLNFP 149
BLAST of FC925143 vs. ExPASy Swiss-Prot
Match: ERF23_ARATH (Ethylene-responsive transcription factor ERF023 OS=Arabidopsis thaliana GN=ERF023 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 2.442e-14 Identity = 46/106 (43.40%), Postives = 62/106 (58.49%), Query Frame = 3 Query: 228 PSSINVRIPP-----PTTSIFRLKDEDKDLEVADDYKERH--YRGVRRRPWGKYAAEIRDPNKKGTRVWLGTFNTAVEAAKAYDNAAFKMRGRKAILNFPLEIGEI 524 P + + PP PT + +K + RH Y GVR+R WGK+ +EIR+P KK +R+WLG+F AAKAYD AAF ++GRKA LNFP EI ++ Sbjct: 3 PQRMKLSSPPVTNNEPTATASAVKSCGGGGKETSSSTTRHPVYHGVRKRRWGKWVSEIREPRKK-SRIWLGSFPVPEMAAKAYDVAAFCLKGRKAQLNFPEEIEDL 107 The following BLAST results are available for this feature:
BLAST of FC925143 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 122
Pagesback to topProperties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925143 ID=FC925143; Name=FC925143; organism=Citrus clementina; type=EST; length=757bpback to top |