FC925171

Overview
NameFC925171
Unique NameFC925171
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_GEOKA (Chaperone protein dnaJ OS=Geobacillus kaustophilus GN=dnaJ PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.320e-25
Identity = 59/103 (57.28%), Postives = 71/103 (68.93%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEA---------GLKGAGMGMGDFSNPFDLFESLFE 670
            A  DYY +LGVS+NA+K EIK AYRKL++ YHPDVNK P+A +KFKEI  AYEVLSDDEKR+ YD++G A         G +G G   G FS  F  FE +FE
Sbjct:    2 AKRDYYEILGVSKNATKDEIKKAYRKLSKQYHPDVNKAPDAAEKFKEIKEAYEVLSDDEKRARYDRFGHADPNETFGGGGFQGGGFDFGGFSG-FGGFEDIFE 103          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ1_SYNY3 (Chaperone protein dnaJ 1 OS=Synechocystis sp. (strain PCC 6803) GN=dnaJ1 PE=3 SV=1)

HSP 1 Score: 116.701 bits (291), Expect = 1.320e-25
Identity = 58/96 (60.42%), Postives = 71/96 (73.96%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKGAGM------GMGDFSNPFDLFESLF 667
            DYY  LGV+R+A K EIK AYR+LAR YHPDVNKEP AE+KFKEI+ AYEVLS+ E R  YD++GEAG+ G G        MGDF+   D+FE++F
Sbjct:    4 DYYQTLGVTRDADKDEIKRAYRRLARKYHPDVNKEPGAEEKFKEINRAYEVLSEPEIRQRYDQFGEAGVSGGGAQGFDVGNMGDFA---DIFETIF 96          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_SYNP2 (Chaperone protein dnaJ OS=Synechococcus sp. (strain ATCC 27264 / PCC 7002 / PR-6) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 116.316 bits (290), Expect = 1.724e-25
Identity = 54/93 (58.06%), Postives = 70/93 (75.27%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKGAGMG---MGDFSNPFDLFESLF 667
            D+Y +LGVSR+  K E+K AYR+LAR YHPDVNK+P AE+KFKEI+ AYEVLS+ E R+ YD++GEAG+ GAG      GD     D+FE++F
Sbjct:    4 DFYEILGVSRDCGKDELKRAYRRLARQYHPDVNKDPGAEEKFKEINRAYEVLSEPETRARYDRFGEAGVSGAGAAGADYGDMGGFADIFETIF 96          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_TRIEI (Chaperone protein dnaJ OS=Trichodesmium erythraeum (strain IMS101) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25
Identity = 56/93 (60.22%), Postives = 73/93 (78.49%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLK-GAGMGMG-DFSNPF-DLFESLF 667
            DYY +LGVSR+A K E+K AYR+LAR YHPDVNKEP +E++FKEI+ AYE+LSD E ++ +D++GEAG+  GA  G   DFS+ F D+FES F
Sbjct:    4 DYYEILGVSRSADKEELKRAYRRLARKYHPDVNKEPGSEERFKEINRAYEILSDPEMKARFDRFGEAGVSGGAASGFSTDFSDSFADIFESFF 96          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCGA (Chaperone protein dnaJ OS=Mycoplasma gallisepticum GN=dnaJ PE=3 SV=2)

HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25
Identity = 53/90 (58.89%), Postives = 69/90 (76.67%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKGAGMGMGDFSNPFDLFESLF 667
            DYY +L VSR+A++ +IK A+RKLA  YHPD NK+ +AE+KFKE++ AYEVLSD+EKR LYD YG  GL  +G   G F NP+D+F S+F
Sbjct:    6 DYYEILEVSRSATQQDIKKAFRKLAMKYHPDRNKDSDAEEKFKEVNEAYEVLSDEEKRKLYDTYGHEGLNASGFHQGGF-NPYDVFNSVF 94          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP8 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 8801) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25
Identity = 55/93 (59.14%), Postives = 68/93 (73.12%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG---AGMGMGDFSNPFDLFESLF 667
            DYY  LGV RNASK +IK AYR+LAR YHPD+NKE  AE +FKEI+ AYEVLS+ E R+ YD++GEAG+ G   AG   GD     D+FE++F
Sbjct:    4 DYYETLGVDRNASKEDIKRAYRRLARKYHPDINKEAGAEDRFKEINRAYEVLSEPETRARYDQFGEAGVSGAGAAGFDYGDMGGFADIFETIF 96          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_CYAP7 (Chaperone protein dnaJ OS=Cyanothece sp. (strain PCC 7424) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 115.161 bits (287), Expect = 3.840e-25
Identity = 54/93 (58.06%), Postives = 71/93 (76.34%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLK---GAGMGMGDFSNPFDLFESLF 667
            DYY +LGVSR+A+K EIK AYR+LAR YHPDVNKE  AE++FKEI+ AYE+LS+ E R+ YD++GEAG+    G+G   GD     D+FE++F
Sbjct:    4 DYYEILGVSRDANKDEIKRAYRRLARKYHPDVNKEIGAEERFKEINRAYEILSEPETRARYDRFGEAGVSSGAGSGFEYGDMGGIADIFETIF 96          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_ROSS1 (Chaperone protein dnaJ OS=Roseiflexus sp. (strain RS-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.015e-25
Identity = 59/91 (64.84%), Postives = 69/91 (75.82%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKGAGMGMGDFSNPFDLFESLFE 670
            DYY VLGV RNAS+ EIK A+R+LAR YHPDVNK P+AE KFKEI+ AYEVLSD EKRS+YD++G AG   A  G   FS+  D F S+FE
Sbjct:    6 DYYEVLGVQRNASQDEIKKAFRRLARQYHPDVNKAPDAEAKFKEINEAYEVLSDPEKRSMYDRFGHAG-PTAAPGFDPFSSA-DPFSSIFE 94          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_MICAN (Chaperone protein dnaJ OS=Microcystis aeruginosa (strain NIES-843) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 114.775 bits (286), Expect = 5.015e-25
Identity = 55/96 (57.29%), Postives = 72/96 (75.00%), Query Frame = 2
Query:  395 SDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKGAGMG-----MGDFSNPFDLFESLF 667
            +DYY +LGVSR+A K +IK AYR+LAR YHPDVNKEP AE+ FKEI+ AYE+LS+ E R+ YD++GEAG+ G   G     MG F+   D+FE++F
Sbjct:    3 TDYYEILGVSRDAGKEDIKRAYRRLARKYHPDVNKEPGAEEHFKEINRAYEILSEPETRNRYDRFGEAGVSGGAAGFDPDNMGGFA---DIFETIF 95          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_MACCJ (Chaperone protein dnaJ OS=Macrococcus caseolyticus (strain JCSC5402) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 114.39 bits (285), Expect = 6.550e-25
Identity = 56/94 (59.57%), Postives = 72/94 (76.60%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGL-KGAGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S+ ASK EIK AY+KL++ YHPD+NKE +AE KFKEI+ AYEVLSDD+K++ YD++G AG+ +GAG G  DF   F  FE +F
Sbjct:    2 AKRDYYEVLGLSKGASKEEIKRAYKKLSKKYHPDINKEADAEDKFKEIAEAYEVLSDDQKKAQYDQFGHAGMGQGAGFGGQDFGG-FGGFEDIF 94          
The following BLAST results are available for this feature:
BLAST of FC925171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_GEOKA1.320e-2557.28Chaperone protein dnaJ OS=Geobacillus kaustophilus... [more]
DNAJ1_SYNY31.320e-2560.42Chaperone protein dnaJ 1 OS=Synechocystis sp. (str... [more]
DNAJ_SYNP21.724e-2558.06Chaperone protein dnaJ OS=Synechococcus sp. (strai... [more]
DNAJ_TRIEI3.840e-2560.22Chaperone protein dnaJ OS=Trichodesmium erythraeum... [more]
DNAJ_MYCGA3.840e-2558.89Chaperone protein dnaJ OS=Mycoplasma gallisepticum... [more]
DNAJ_CYAP83.840e-2559.14Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_CYAP73.840e-2558.06Chaperone protein dnaJ OS=Cyanothece sp. (strain P... [more]
DNAJ_ROSS15.015e-2564.84Chaperone protein dnaJ OS=Roseiflexus sp. (strain ... [more]
DNAJ_MICAN5.015e-2557.29Chaperone protein dnaJ OS=Microcystis aeruginosa (... [more]
DNAJ_MACCJ6.550e-2559.57Chaperone protein dnaJ OS=Macrococcus caseolyticus... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YD09FM1 TF Citrus clementina cDNA clone KN0AAP3YD09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925171 ID=FC925171; Name=FC925171; organism=Citrus clementina; type=EST; length=738bp
GCTCGTGCGCTTCTCTTCCGCTGCTCTCCCTCTCTAAAACCTTTAAGAGG
GAACGAGACGACGGAGAAGATAAGATTAAACGACAACAGTCAGGAAACTC
AGATTAGGCCAGTTGATCAGCCCCTTTTCCCTTGCTAAAACAACTTAGAT
GGCCATTATACCTTGTGGAAGTACATGGGTTGCTCAGTGGGGTATTCGTC
CTCAGTTTATGCTAAGATCCTCTACCCCAAACAGGATGTCAACATGCCAA
TCTGGCATCACAAGCAGGTTAAGCTGTCTGGCTGCTCCAAGTTCAAGCTT
TTTTTCACGCAAGTCCTTCTCTTTGTTATCTTATGCTAGTCCATCTCAGA
CTTCATACCGTCGTAGGGGAGCACGATTGATCGTTAGAGCTGATAGTGAC
TACTATTCAGTTCTAGGGGTGTCAAGAAATGCAAGTAAATCTGAAATTAA
AAGCGCTTATCGGAAGCTTGCAAGGAGTTATCACCCGGATGTAAACAAAG
AACCTAATGCAGAACAGAAGTTCAAGGAAATTAGCAATGCATATGAGGTT
CTGTCAGATGATGAGAAACGTTCTTTATATGACAAATATGGGGAGGCTGG
ACTTAAAGGTGCTGGTATGGGCATGGGGGATTTCAGCAATCCTTTCGATT
TGTTTGAATCACTATTTGAGGGCATGGGTGGTATGGGCGGAATGGGGGGC
ATGGGAAGCAGAGCTTCCAGGAGCAGAGCAGTTGATGG
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