FC925171

Overview
NameFC925171
Unique NameFC925171
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAE (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Newman) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG--------------AGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++KFKEIS AYEVLSDD KR+ YD++G  G +G              +G G G F    D+F S F
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAC (Chaperone protein dnaJ OS=Staphylococcus aureus (strain COL) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG--------------AGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++KFKEIS AYEVLSDD KR+ YD++G  G +G              +G G G F    D+F S F
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_STAAB (Chaperone protein dnaJ OS=Staphylococcus aureus (strain bovine RF122 / ET3-1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG--------------AGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++KFKEIS AYEVLSDD KR+ YD++G  G +G              +G G G F    D+F S F
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA9 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH9) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG--------------AGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++KFKEIS AYEVLSDD KR+ YD++G  G +G              +G G G F    D+F S F
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA8 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain NCTC 8325) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG--------------AGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++KFKEIS AYEVLSDD KR+ YD++G  G +G              +G G G F    D+F S F
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA3 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain USA300) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG--------------AGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++KFKEIS AYEVLSDD KR+ YD++G  G +G              +G G G F    D+F S F
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA2 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain JH1) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG--------------AGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++KFKEIS AYEVLSDD KR+ YD++G  G +G              +G G G F    D+F S F
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_STAA1 (Chaperone protein dnaJ OS=Staphylococcus aureus (strain Mu3 / ATCC 700698) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 56/107 (52.34%), Postives = 70/107 (65.42%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKG--------------AGMGMGDFSNPFDLFESLF 667
            A  DYY VLG+S++ASK EIK AYRKL++ YHPD+NKE  A++KFKEIS AYEVLSDD KR+ YD++G  G +G              +G G G F    D+F S F
Sbjct:    2 AKRDYYEVLGISKDASKDEIKKAYRKLSKKYHPDINKEEGADEKFKEISEAYEVLSDDNKRASYDQFGHDGPQGFGGQGFNGSDFGGFSGFGGGGFE---DIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_BACP2 (Chaperone protein dnaJ OS=Bacillus pumilus (strain SAFR-032) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.612 bits (270), Expect = 3.594e-23
Identity = 53/98 (54.08%), Postives = 67/98 (68.37%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEA----GLKGAGMG----MGDFSNPFDLFESLF 667
            DYY VLGVS++ASK EIK AYRKL++ YHPD+NKE  +++KFKE+  AYE LSDD+KRS YD++G      G  G G G     G F    D+F S+F
Sbjct:    5 DYYEVLGVSKSASKDEIKKAYRKLSKKYHPDINKEAGSDEKFKEVKEAYETLSDDQKRSQYDQFGHTDPNQGFGGGGFGGGGDFGGFGGFDDIFSSIF 102          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_PEDPA (Chaperone protein dnaJ OS=Pediococcus pentosaceus (strain ATCC 25745 / 183-1w) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 53/98 (54.08%), Postives = 70/98 (71.43%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYG----EAGLKGAGM-GMGDFSNPFDLFESLF 667
            A+ DYY +LGVS++AS  EIK AYRKL++ YHPD+NK P+AEQKFK+++ AYEVL D +KR+ YD++G     AG  G G  G G FS+    FE +F
Sbjct:    3 ANKDYYDILGVSKDASDDEIKKAYRKLSKKYHPDINKAPDAEQKFKDVNEAYEVLGDSQKRAQYDQFGSADPNAGFGGGGFGGQGGFSDFGGGFEDIF 100          
The following BLAST results are available for this feature:
BLAST of FC925171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_STAAE3.594e-2352.34Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAC3.594e-2352.34Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAAB3.594e-2352.34Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA93.594e-2352.34Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA83.594e-2352.34Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA33.594e-2352.34Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA23.594e-2352.34Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_STAA13.594e-2352.34Chaperone protein dnaJ OS=Staphylococcus aureus (s... [more]
DNAJ_BACP23.594e-2354.08Chaperone protein dnaJ OS=Bacillus pumilus (strain... [more]
DNAJ_PEDPA4.694e-2354.08Chaperone protein dnaJ OS=Pediococcus pentosaceus ... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YD09FM1 TF Citrus clementina cDNA clone KN0AAP3YD09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925171 ID=FC925171; Name=FC925171; organism=Citrus clementina; type=EST; length=738bp
GCTCGTGCGCTTCTCTTCCGCTGCTCTCCCTCTCTAAAACCTTTAAGAGG
GAACGAGACGACGGAGAAGATAAGATTAAACGACAACAGTCAGGAAACTC
AGATTAGGCCAGTTGATCAGCCCCTTTTCCCTTGCTAAAACAACTTAGAT
GGCCATTATACCTTGTGGAAGTACATGGGTTGCTCAGTGGGGTATTCGTC
CTCAGTTTATGCTAAGATCCTCTACCCCAAACAGGATGTCAACATGCCAA
TCTGGCATCACAAGCAGGTTAAGCTGTCTGGCTGCTCCAAGTTCAAGCTT
TTTTTCACGCAAGTCCTTCTCTTTGTTATCTTATGCTAGTCCATCTCAGA
CTTCATACCGTCGTAGGGGAGCACGATTGATCGTTAGAGCTGATAGTGAC
TACTATTCAGTTCTAGGGGTGTCAAGAAATGCAAGTAAATCTGAAATTAA
AAGCGCTTATCGGAAGCTTGCAAGGAGTTATCACCCGGATGTAAACAAAG
AACCTAATGCAGAACAGAAGTTCAAGGAAATTAGCAATGCATATGAGGTT
CTGTCAGATGATGAGAAACGTTCTTTATATGACAAATATGGGGAGGCTGG
ACTTAAAGGTGCTGGTATGGGCATGGGGGATTTCAGCAATCCTTTCGATT
TGTTTGAATCACTATTTGAGGGCATGGGTGGTATGGGCGGAATGGGGGGC
ATGGGAAGCAGAGCTTCCAGGAGCAGAGCAGTTGATGG
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