FC925171

Overview
NameFC925171
Unique NameFC925171
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length738
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMF (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain F2365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 54/100 (54.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGE-------AGLKGAGMGMGDFSNPFDLFESLF 667
            A  DYY VLGVS++AS  EIK AYRKL++ YHPD+NKE  A++KFKEIS AYE LSD +KR+ YD+YG         G  G G   G FS   D+F++ F
Sbjct:    2 AKRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFF 101          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_LISMC (Chaperone protein dnaJ OS=Listeria monocytogenes serotype 4b (strain Clip81459) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 54/100 (54.00%), Postives = 67/100 (67.00%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGE-------AGLKGAGMGMGDFSNPFDLFESLF 667
            A  DYY VLGVS++AS  EIK AYRKL++ YHPD+NKE  A++KFKEIS AYE LSD +KR+ YD+YG         G  G G   G FS   D+F++ F
Sbjct:    2 AKRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADEKFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFF 101          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRJ (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain JCM 1112) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKGA-GMGMGDF 634
            A+ DYY +LGVS++AS+ +IK AYR+LA  YHPDVN EP AE+KFK+I+ AYE LSD +KR+ YD++G AG +GA G G G F
Sbjct:    2 AEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFGSAGPQGAGGQGFGGF 84          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_LACRD (Chaperone protein dnaJ OS=Lactobacillus reuteri (strain DSM 20016) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 50/83 (60.24%), Postives = 65/83 (78.31%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKGA-GMGMGDF 634
            A+ DYY +LGVS++AS+ +IK AYR+LA  YHPDVN EP AE+KFK+I+ AYE LSD +KR+ YD++G AG +GA G G G F
Sbjct:    2 AEQDYYDILGVSKDASEKDIKRAYRRLAAKYHPDVNHEPGAEEKFKKINEAYETLSDSQKRAQYDQFGSAGPQGAGGQGFGGF 84          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDB (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC BAA-365) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLK----------GAGMGMGDFSNPFDLFESLF 667
            A+ DYY VLGVSR+AS +EI  AYRKLA+ YHPD+N E  AE+K+KE++ AYEVL D +KR  YD++G+AG+           G G G  DF +  D+F S F
Sbjct:    3 ANRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGMNGQGGFGGQYGGQGFGGADFGDFGDIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_LACDA (Chaperone protein dnaJ OS=Lactobacillus delbrueckii subsp. bulgaricus (strain ATCC 11842 / DSM 20081) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 53/103 (51.46%), Postives = 69/103 (66.99%), Query Frame = 2
Query:  389 ADSDYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLK----------GAGMGMGDFSNPFDLFESLF 667
            A+ DYY VLGVSR+AS +EI  AYRKLA+ YHPD+N E  AE+K+KE++ AYEVL D +KR  YD++G+AG+           G G G  DF +  D+F S F
Sbjct:    3 ANRDYYDVLGVSRDASDAEISKAYRKLAKKYHPDLNHEAGAEEKYKEVNEAYEVLHDPQKRQQYDQFGQAGMNGQGGFGGQYGGQGFGGADFGDFGDIFSSFF 105          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_BACCR (Chaperone protein dnaJ OS=Bacillus cereus (strain ATCC 14579 / DSM 31) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLK---GAGMGMGDFSNPF---DLFESLF 667
            DYY VLG+S+ AS  EIK AYR+LA+ YHPDV+KE NA +KFKE+  AYEVLSDD+KR+ YD++G AG     G   G GDF   F   D+F S F
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFF 100          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC4 (Chaperone protein dnaJ OS=Bacillus cereus (strain B4264) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLK---GAGMGMGDFSNPF---DLFESLF 667
            DYY VLG+S+ AS  EIK AYR+LA+ YHPDV+KE NA +KFKE+  AYEVLSDD+KR+ YD++G AG     G   G GDF   F   D+F S F
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFF 100          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_BACC2 (Chaperone protein dnaJ OS=Bacillus cereus (strain G9842) GN=dnaJ PE=3 SV=1)

HSP 1 Score: 108.227 bits (269), Expect = 4.694e-23
Identity = 55/96 (57.29%), Postives = 67/96 (69.79%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLK---GAGMGMGDFSNPF---DLFESLF 667
            DYY VLG+S+ AS  EIK AYR+LA+ YHPDV+KE NA +KFKE+  AYEVLSDD+KR+ YD++G AG     G   G GDF   F   D+F S F
Sbjct:    5 DYYEVLGLSKGASTDEIKKAYRRLAKKYHPDVSKEENAIEKFKEVQEAYEVLSDDQKRAQYDQFGHAGANQGFGGFGGGGDFGGGFGFEDIFSSFF 100          
BLAST of FC925171 vs. ExPASy Swiss-Prot
Match: DNAJ_MYCPE (Chaperone protein dnaJ OS=Mycoplasma penetrans GN=dnaJ PE=3 SV=1)

HSP 1 Score: 107.842 bits (268), Expect = 6.130e-23
Identity = 51/90 (56.67%), Postives = 67/90 (74.44%), Query Frame = 2
Query:  398 DYYSVLGVSRNASKSEIKSAYRKLARSYHPDVNKEPNAEQKFKEISNAYEVLSDDEKRSLYDKYGEAGLKGAGMGMGDFSNPFDLFESLF 667
            DYY VLGVS++A+  +IKSA+RK A  YHPD NKEP+AE+KFKE++ AYEVLSD +KR+ YD++G  G+ G   G G   +PFD+F   F
Sbjct:    6 DYYEVLGVSKDATDDQIKSAFRKKAMQYHPDRNKEPDAEEKFKEVNQAYEVLSDPDKRANYDRFGHEGVDGQ-FGGGAGFDPFDIFNQFF 94          
The following BLAST results are available for this feature:
BLAST of FC925171 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
DNAJ_LISMF4.694e-2354.00Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LISMC4.694e-2354.00Chaperone protein dnaJ OS=Listeria monocytogenes s... [more]
DNAJ_LACRJ4.694e-2360.24Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]
DNAJ_LACRD4.694e-2360.24Chaperone protein dnaJ OS=Lactobacillus reuteri (s... [more]
DNAJ_LACDB4.694e-2351.46Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_LACDA4.694e-2351.46Chaperone protein dnaJ OS=Lactobacillus delbruecki... [more]
DNAJ_BACCR4.694e-2357.29Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC44.694e-2357.29Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_BACC24.694e-2357.29Chaperone protein dnaJ OS=Bacillus cereus (strain ... [more]
DNAJ_MYCPE6.130e-2356.67Chaperone protein dnaJ OS=Mycoplasma penetrans GN=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YD09FM1 TF Citrus clementina cDNA clone KN0AAP3YD09, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925171 ID=FC925171; Name=FC925171; organism=Citrus clementina; type=EST; length=738bp
GCTCGTGCGCTTCTCTTCCGCTGCTCTCCCTCTCTAAAACCTTTAAGAGG
GAACGAGACGACGGAGAAGATAAGATTAAACGACAACAGTCAGGAAACTC
AGATTAGGCCAGTTGATCAGCCCCTTTTCCCTTGCTAAAACAACTTAGAT
GGCCATTATACCTTGTGGAAGTACATGGGTTGCTCAGTGGGGTATTCGTC
CTCAGTTTATGCTAAGATCCTCTACCCCAAACAGGATGTCAACATGCCAA
TCTGGCATCACAAGCAGGTTAAGCTGTCTGGCTGCTCCAAGTTCAAGCTT
TTTTTCACGCAAGTCCTTCTCTTTGTTATCTTATGCTAGTCCATCTCAGA
CTTCATACCGTCGTAGGGGAGCACGATTGATCGTTAGAGCTGATAGTGAC
TACTATTCAGTTCTAGGGGTGTCAAGAAATGCAAGTAAATCTGAAATTAA
AAGCGCTTATCGGAAGCTTGCAAGGAGTTATCACCCGGATGTAAACAAAG
AACCTAATGCAGAACAGAAGTTCAAGGAAATTAGCAATGCATATGAGGTT
CTGTCAGATGATGAGAAACGTTCTTTATATGACAAATATGGGGAGGCTGG
ACTTAAAGGTGCTGGTATGGGCATGGGGGATTTCAGCAATCCTTTCGATT
TGTTTGAATCACTATTTGAGGGCATGGGTGGTATGGGCGGAATGGGGGGC
ATGGGAAGCAGAGCTTCCAGGAGCAGAGCAGTTGATGG
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