FC925180
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925180 vs. ExPASy Swiss-Prot
Match: ARL10_MOUSE (ADP-ribosylation factor-like protein 10 OS=Mus musculus GN=Arl10 PE=2 SV=1) HSP 1 Score: 87.8113 bits (216), Expect = 6.615e-17 Identity = 54/155 (34.84%), Postives = 85/155 (54.84%), Query Frame = 1 Query: 16 EMRILMVGLDAAGKTTILYKLK-LGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLG-LHSLRQRH-WYIQSTCATSGEGLYE 471 + +L++GLD +GK+T L L + +PT GFN + KN + ++G +R W+ + L+F+VDS DR R+ AR EL ++L+ D D +++ ANKQDL AMN E+ +LG L S QR + + ++ A +G G E Sbjct: 76 QREVLVLGLDGSGKSTFLRMLAGKPPVEGHVPTWGFNSVRLPTKNFEVDLLEIGDSQNLRFYWKEFVNEVDVLVFMVDSTDRLRLPWARQELQKLLDRDP--DLPVVIVANKQDLSGAMNMVELQQELGLLASYNQREVFLLAASIAPAGSGFGE 228
BLAST of FC925180 vs. ExPASy Swiss-Prot
Match: CIN4_YEAST (GTP-binding protein CIN4 OS=Saccharomyces cerevisiae GN=CIN4 PE=1 SV=1) HSP 1 Score: 86.6557 bits (213), Expect = 1.474e-16 Identity = 48/136 (35.29%), Postives = 78/136 (57.35%), Query Frame = 1 Query: 16 EMRILMVGLDAAGKTTILYKLKLGEIVTT---IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELR---DAVLLVFANKQDLPNAMNAAEITDKLGLH 405 E+R L++GLD +GK+TI+ KL + +PT+GF + ++ K+++ ++WD+GGQ +RP W +YF TQ +I+ +D + R E EL ++N DE R + ++V NK DL + DK LH Sbjct: 16 EIRCLILGLDNSGKSTIVNKLLPKDEQNNDGIMPTVGFQIHSLMIKDVTISLWDIGGQRTLRPFWDNYFDKTQAMIWCIDVSLSMRFDETLQELKELINRDENRIGYECAVIVVLNKIDL--------VEDKSELH 143
BLAST of FC925180 vs. ExPASy Swiss-Prot
Match: SAR1_GIALA (GTP-binding protein Sar1 OS=Giardia lamblia GN=SAR1 PE=3 SV=1) HSP 1 Score: 85.8853 bits (211), Expect = 2.514e-16 Identity = 52/171 (30.41%), Postives = 81/171 (47.37%), Query Frame = 1 Query: 10 KIEMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGLHSL-----------RQRHWYIQSTCATSGEGLYEGLDWLS 489 K + I+ VGLD AGK+T+L LK T PT + + +I F +D+GG + R LW Y N+ G++F+VDS D R E+R L +L+ +L +L+ +NK D+ A++ + G+ L QR + + G +G WLS Sbjct: 18 KKKATIVFVGLDNAGKSTLLAMLKNSATTTVAPTQQPTSQELVMGSIRFKTFDLGGHEVARQLWEQYVTNSDGIVFLVDSADPSRFEESRRTLQELLDNHDLATTPILILSNKVDIQTAVSMETMVQSFGIQHLLTGKGGSNLRSDQRPLEVFPCSVINRFGYTDGFKWLS 188
BLAST of FC925180 vs. ExPASy Swiss-Prot
Match: ARLX_DICDI (ADP-ribosylation factor-like protein DDB_G0292332 OS=Dictyostelium discoideum GN=DDB_G0292332 PE=3 SV=1) HSP 1 Score: 83.9593 bits (206), Expect = 9.552e-16 Identity = 44/124 (35.48%), Postives = 74/124 (59.68%), Query Frame = 1 Query: 22 RILMVGLDAAGKTTILYKLK--LGEIVTT---------IPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYF-QNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 357 +++++G++ GKTT+LY + E +TT IPT GFNVE++ + + F +WD+GG++ R +RHY +IFV DS+D + + E++ E + N+ L++ L+ ANKQDL Sbjct: 19 KVMILGVENVGKTTLLYNIYKFYSENITTTTLSSLPIPIPTNGFNVESIVIEQVKFDIWDIGGKETNRICYRHYLTSEIDSIIFVFDSSDINSLEESKKEYQYLKNQISLKNVPFLLVANKQDL 142
BLAST of FC925180 vs. ExPASy Swiss-Prot
Match: ARL9_HUMAN (ADP-ribosylation factor-like protein 9 OS=Homo sapiens GN=ARL9 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 1.379e-14 Identity = 46/128 (35.94%), Postives = 72/128 (56.25%), Query Frame = 1 Query: 22 RILMVGLDAAGKTTILYKLKLGEIVTTI-PTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDLPNAMNAAEITDKLGL 402 +IL++GLD AGKT++L+ L + ++ PT GF+ + ++ ++GG R W Y LIFVVDS D R+ EA+ LH+++ + + L+VFANKQDL A + +I + L L Sbjct: 20 QILVLGLDGAGKTSVLHSLASNRVQHSVAPTQGFHAVCINTEDSQMEFLEIGGSKPFRSYWEMYLSKGLLLIFVVDSADHSRLPEAKKYLHQLIAANPV--LPLVVFANKQDLEAAYHITDIHEALAL 145
BLAST of FC925180 vs. ExPASy Swiss-Prot
Match: SAR1_ENCCU (Small COPII coat GTPase SAR1 OS=Encephalitozoon cuniculi GN=SAR1 PE=1 SV=1) HSP 1 Score: 70.8626 bits (172), Expect = 8.368e-12 Identity = 40/111 (36.04%), Postives = 62/111 (55.86%), Query Frame = 1 Query: 25 ILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLNEDELRDAVLLVFANKQDL 357 IL +G+D AGKTT++ KLK +PT + +E N+ V D+GG R WR YF + G++F+VD +D +R E R+ +L+ + + A ++V NK DL Sbjct: 38 ILFLGIDNAGKTTLVNKLKSDSTDVYMPTHHPSTSYIEIGNLKAQVIDLGGHTAARLAWRDYFYDCHGIVFIVDVHDVERFQEVREAYETVLSLE--KRAPVVVLMNKIDL 146
BLAST of FC925180 vs. ExPASy Swiss-Prot
Match: SAR1_TOBAC (GTP-binding protein SAR1 OS=Nicotiana tabacum GN=SAR1 PE=2 SV=1) HSP 1 Score: 70.0922 bits (170), Expect = 1.427e-11 Identity = 35/96 (36.46%), Postives = 56/96 (58.33%), Query Frame = 1 Query: 16 EMRILMVGLDAAGKTTILYKLKLGEIVTTIPTIGFNVETVEYKNISFTVWDVGGQDKIRPLWRHYFQNTQGLIFVVDSNDRDRVVEARDELHRMLN 303 E +IL +GLD AGKTT+L+ LK +V PT E + I F +D+GG R +W+ Y+ ++++VDS D++R E++ EL +L+ Sbjct: 20 EAKILFLGLDNAGKTTLLHMLKDERLVQHQPTQYPTSEELSIGKIKFKAFDLGGHQIARRVWKDYYAKVDAVVYLVDSFDKERFAESKKELDALLS 115 The following BLAST results are available for this feature:
BLAST of FC925180 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 217
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925180 ID=FC925180; Name=FC925180; organism=Citrus clementina; type=EST; length=738bpback to top |