FC925262
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: SNU13_YEAST (13 kDa ribonucleoprotein-associated protein OS=Saccharomyces cerevisiae GN=SNU13 PE=1 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.368e-13 Identity = 34/99 (34.34%), Postives = 59/99 (59.60%), Query Frame = 3 Query: 87 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLT 383 P A PLA L+++ L +V++AA + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V S+ L A RP + T Sbjct: 6 PKAFPLADAALTQQILDVVQQAANLRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITT 104
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: SNU13_YARLI (13 kDa ribonucleoprotein-associated protein OS=Yarrowia lipolytica GN=SNU13 PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.368e-13 Identity = 40/121 (33.06%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 87 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 449 P A PLA L+++ L +V++A + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PYI+V SK L A RP V + Q Q K K + L+ Sbjct: 6 PKAFPLADAALTQQILDIVQQATHLRQLKKGANEATKTLNRGISEFIIMAADAEPIEILLHLPLLCEDKNVPYIFVPSKVALGRACGVSRPVISASVTSNDASQLKDQIIQMKDKIERLLI 126
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: RL7A_NANEQ (50S ribosomal protein L7Ae OS=Nanoarchaeum equitans GN=rpl7ae PE=3 SV=1) HSP 1 Score: 75.8702 bits (185), Expect = 1.368e-13 Identity = 33/85 (38.82%), Postives = 54/85 (63.53%), Query Frame = 3 Query: 87 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANA 341 P K ++L+ + +LVR+A E +++G E K++ RG L +IA N++P +++ H+P LCEE +PY+YV SKE+L A Sbjct: 6 PYVKFEVPEELANKVYELVRKARETGKIRKGTNETTKAVERGQAKLVIIAENVNPPEIVMHLPALCEEKGVPYVYVPSKEELGKA 90
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: SNU13_DEBHA (13 kDa ribonucleoprotein-associated protein OS=Debaryomyces hansenii GN=SNU13 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.787e-13 Identity = 38/121 (31.40%), Postives = 64/121 (52.89%), Query Frame = 3 Query: 87 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 449 P A PLA L+++ L +V+++ + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V SK L A RP V T Q K K + L+ Sbjct: 6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKTALGRACGVSRPVIAASVTTNEASAMKNQIYGIKDKIETLLI 126
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: SNU13_ASHGO (13 kDa ribonucleoprotein-associated protein OS=Ashbya gossypii GN=SNU13 PE=3 SV=1) HSP 1 Score: 75.485 bits (184), Expect = 1.787e-13 Identity = 37/121 (30.58%), Postives = 65/121 (53.72%), Query Frame = 3 Query: 87 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKGELGQEEQDKLKADYTLV 449 P A PLA L+++ L +V++A+ + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V S+ L A RP + T Q K K + L+ Sbjct: 7 PKAFPLADAALTQQILDVVQQASNMRQLKKGANEATKTLNRGISEFIIMAADCEPIEILLHLPLLCEDKNVPYVFVPSRVALGRACGVSRPVIAASITTNDASAIKSQIYAVKDKIETLLI 127
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: RL7A_THEON (50S ribosomal protein L7Ae OS=Thermococcus onnurineus (strain NA1) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 74.3294 bits (181), Expect = 3.981e-13 Identity = 38/107 (35.51%), Postives = 66/107 (61.68%), Query Frame = 3 Query: 114 KLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVLTKPTKG-ELGQEEQDKLK 431 +L+++ L+ V A + +++G E K++ RG L +IA ++ P +++ H+P LCEE +IPYIYV SK++L A + P V ++ +P KG EL +E K++ Sbjct: 14 ELAEKALEAVELARDTGRIRKGTNETTKAVERGQAKLVIIAEDVDPEEIVAHLPPLCEEKEIPYIYVPSKKELGAAAGIEVPAASVAII-EPGKGRELVEEIAMKVR 119
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: SNU13_CANAL (13 kDa ribonucleoprotein-associated protein OS=Candida albicans GN=SNU13 PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.791e-13 Identity = 33/97 (34.02%), Postives = 57/97 (58.76%), Query Frame = 3 Query: 87 PIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLV 377 P A PLA L+++ L +V+++ + LK+G E K++ RG ++A + PI+++ H+P+LCE+ ++PY++V SK L A RP V Sbjct: 6 PKAFPLADSALTQQILDVVQQSQNLRQLKKGANEATKTLNRGISEFIIMAADTEPIEILLHLPLLCEDKNVPYVFVPSKAALGRACGVSRPVIAASV 102
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: RL7A_SULIY (50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain Y.G.57.14 / Yellowstone #1) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.791e-13 Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 75 VSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 380 +S A K + L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E IPY+YV+SK+ L A + T +L Sbjct: 1 MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAIL 102
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: RL7A_SULIN (50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain Y.N.15.51 / Yellowstone #2) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.791e-13 Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 75 VSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 380 +S A K + L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E IPY+YV+SK+ L A + T +L Sbjct: 1 MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAIL 102
BLAST of FC925262 vs. ExPASy Swiss-Prot
Match: RL7A_SULIM (50S ribosomal protein L7Ae OS=Sulfolobus islandicus (strain M.14.25 / Kamchatka #1) GN=rpl7Ae PE=3 SV=1) HSP 1 Score: 73.559 bits (179), Expect = 6.791e-13 Identity = 36/102 (35.29%), Postives = 59/102 (57.84%), Query Frame = 3 Query: 75 VSLAPIAKPLAGKKLSKRTLKLVRRAAEHKCLKRGVKEVVKSIRRGHKGLCVIAGNISPIDVITHVPILCEESDIPYIYVASKEDLANAGATKRPTCCVLVL 380 +S A K + L+ + L+ VR+A E +K+G E K++ RG L VIA ++ P +++ H+P+LC+E IPY+YV+SK+ L A + T +L Sbjct: 1 MSKASYVKFEVPQDLADKVLEAVRKAKESGKIKKGTNETTKAVERGQAKLVVIAEDVQPEEIVAHLPLLCDEKKIPYVYVSSKKALGEACGLQVATASAAIL 102 The following BLAST results are available for this feature:
BLAST of FC925262 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 62
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925262 ID=FC925262; Name=FC925262; organism=Citrus clementina; type=EST; length=535bpback to top |