FC925268
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: BSAA_STAAC (Glutathione peroxidase homolog bsaA OS=Staphylococcus aureus (strain COL) GN=bsaA PE=3 SV=1) HSP 1 Score: 125.946 bits (315), Expect = 6.006e-29 Identity = 54/113 (47.79%), Postives = 78/113 (69.03%), Query Frame = 2 Query: 8 SNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 S + L LY+KYK+QG IL FPCNQFG QEPG E+ + + FP+ K+DV G++ PL+++L +++ G F + IKWNF+KFLVD+EG+VV+R+AP P+ IE+ Sbjct: 40 SQFEGLQSLYEKYKDQGFVILGFPCNQFGGQEPGSGEEAAQNCKLNYGVTFPMHQKIDVKGEHQLPLFRYLTAAQHGFFNEKIKWNFTKFLVDREGNVVKRFAPQKKPVQIER 152
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX1_SCHMA (Glutathione peroxidase OS=Schistosoma mansoni GN=GPX1 PE=1 SV=2) HSP 1 Score: 125.176 bits (313), Expect = 1.025e-28 Identity = 56/114 (49.12%), Postives = 80/114 (70.18%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIE 343 T+ NY +L +++ + +GL ILAFPCNQFG QEP +I++F ++ +F +F K+ VNG +A LYK LKS + G ++IKWNFSKFLVD++G V+RY+PTT+P IE Sbjct: 46 TDKNYRQLQEMHTRLVGKGLRILAFPCNQFGGQEPWAEAEIKKFVTEKYGVQFDMFSKIKVNGSDADDLYKFLKSRQHGTLTNNIKWNFSKFLVDRQGQPVKRYSPTTAPYDIE 159
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX4_PIG (Phospholipid hydroperoxide glutathione peroxidase, mitochondrial OS=Sus scrofa GN=GPX4 PE=1 SV=3) HSP 1 Score: 124.02 bits (310), Expect = 2.282e-28 Identity = 63/117 (53.85%), Postives = 82/117 (70.09%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 T NYT+L L+ +Y GL ILAFPCNQFG QEPG + +I+EFA + +F +F K+ VNGD+A PL+K +K KG G+ G++IKWNF+KFL+DK G VV+RY P P IEK Sbjct: 76 TEVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSDAEIKEFA-AGYNVKFDMFSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCVVKRYGPMEEPQVIEK 191
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX42_MOUSE (Phospholipid hydroperoxide glutathione peroxidase, nuclear OS=Mus musculus GN=Gpx4 PE=2 SV=3) HSP 1 Score: 122.865 bits (307), Expect = 5.085e-28 Identity = 61/117 (52.14%), Postives = 83/117 (70.94%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLK-SSKG-GLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 T+ NYT+L L+ +Y GL ILAFPCNQFG QEPG N++I+EFA + +F ++ K+ VNGD+A PL+K +K KG G+ G++IKWNF+KFL+DK G V+RY P P IE+ Sbjct: 132 TDVNYTQLVDLHARYAECGLRILAFPCNQFGRQEPGSNQEIKEFA-AGYNVKFDMYSKICVNGDDAHPLWKWMKVQPKGRGMLGNAIKWNFTKFLIDKNGCEVKRYGPMEEPQVIER 247
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPO_LACLM (Glutathione peroxidase OS=Lactococcus lactis subsp. cremoris (strain MG1363) GN=gpo PE=3 SV=1) HSP 1 Score: 122.094 bits (305), Expect = 8.673e-28 Identity = 54/108 (50.00%), Postives = 73/108 (67.59%), Query Frame = 2 Query: 23 LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 L +LY+ YK+QGLEIL FPCNQF Q+ G+N +I EF + F +F K+ VNG A PLY+ LK G +IKWNF+KFL+D++G V+ER+AP T P +E+ Sbjct: 44 LEKLYETYKDQGLEILGFPCNQFANQDAGENTEINEFCQLNYGVTFTMFQKIKVNGKEAHPLYQFLKKEAKGALSGTIKWNFTKFLIDRDGQVIERFAPKTEPEEMEE 151
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX1_SCHPO (Glutathione peroxidase OS=Schizosaccharomyces pombe GN=gpx1 PE=2 SV=1) HSP 1 Score: 120.553 bits (301), Expect = 2.523e-27 Identity = 55/110 (50.00%), Postives = 74/110 (67.27%), Query Frame = 2 Query: 14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIE 343 Y L LY KYK++G IL FPCNQFG QEPG +E+I +F + FP+ K++VNGDN P+Y+ LKS K L + IKWNF KFLV+++G V+ERY+ + P +E Sbjct: 42 YKGLEALYQKYKDRGFIILGFPCNQFGNQEPGSDEEIAQFCQKNYGVTFPVLAKINVNGDNVDPVYQFLKSQKKQLGLERIKWNFEKFLVNRQGQVIERYSSISKPEHLE 151
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: BSAA_STAES (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 12228) GN=bsaA PE=3 SV=1) HSP 1 Score: 116.316 bits (290), Expect = 4.759e-26 Identity = 51/107 (47.66%), Postives = 72/107 (67.29%), Query Frame = 2 Query: 23 LSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIE 343 L +LYD+YK+Q IL FPCNQFG QEPG E+ + + FPI +KVDV GDN PL+ L ++ G+ + IKWNF+KFL+D+EG+V++R++P P I+ Sbjct: 45 LQKLYDEYKDQRFIILGFPCNQFGGQEPGSGEEAAQNCKINYGVTFPIHEKVDVKGDNQHPLFHFLTNAAKGMINEKIKWNFTKFLIDREGNVIKRFSPQKKPEQIK 151
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: BSAA_STAEQ (Glutathione peroxidase homolog bsaA OS=Staphylococcus epidermidis (strain ATCC 35984 / RP62A) GN=bsaA PE=3 SV=1) HSP 1 Score: 115.931 bits (289), Expect = 6.215e-26 Identity = 54/114 (47.37%), Postives = 74/114 (64.91%), Query Frame = 2 Query: 5 NSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 N + +L LY KY GLEIL+FPCN F QEPG + I +F FPI K++VNG++ PLY LK + GLFG IKWNF+KF+VD++G++V+R+ P +P +EK Sbjct: 38 NDQFNKLEMLYKKYHKYGLEILSFPCNDFNNQEPGLIKDIYRVYKYKFGITFPIHAKINVNGEHEHPLYTLLKCKQPGLFGSQIKWNFTKFVVDQQGNIVKRFLPCDNPNQMEK 151
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPX1_CHLRE (Glutathione peroxidase 1, mitochondrial OS=Chlamydomonas reinhardtii GN=GPX PE=1 SV=2) HSP 1 Score: 113.62 bits (283), Expect = 3.085e-25 Identity = 62/117 (52.99%), Postives = 73/117 (62.39%), Query Frame = 2 Query: 2 TNSNYTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTR--FKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLFGDSIKWNFSKFLVDKEGDVVERYAPTTSPLSIEK 346 T +NY E + L KY L I+AFPCNQFG QEPG N +I+ FA R A + DKVDVNG NA+P+Y LK + G I WNF KFLV +G V RYAPTT PLS+EK Sbjct: 78 TAANYKEFATLLGKYPATDLTIVAFPCNQFGGQEPGTNAEIKAFASARGFSGAGALLMDKVDVNGANASPVYNFLKVAAGDT--SDIGWNFGKFLVRPDGTVFGRYAPTTGPLSLEK 192
BLAST of FC925268 vs. ExPASy Swiss-Prot
Match: GPO_SYNY3 (Putative glutathione peroxidase OS=Synechocystis sp. (strain PCC 6803) GN=slr1171 PE=3 SV=1) HSP 1 Score: 113.235 bits (282), Expect = 4.029e-25 Identity = 52/112 (46.43%), Postives = 74/112 (66.07%), Query Frame = 2 Query: 14 YTELSQLYDKYKNQGLEILAFPCNQFGAQEPGDNEQIQEFACTRFKAEFPIFDKVDVNGDNAAPLYKHLKSSKGGLF------GDSIKWNFSKFLVDKEGDVVERYAPTTSP 331 Y L LY+++ ++G +L FPCNQFG QEPG + +I+ F TR+ FP+F+KV+VNG NA PL+K L ++ G+ + IKWNF+KFLVD++G VV+RY P Sbjct: 47 YQGLQALYNRFGDRGFTVLGFPCNQFGQQEPGGSGEIKNFCETRYGVTFPLFEKVEVNGPNAHPLFKFLTAASPGMAIPFLGGAEDIKWNFTKFLVDRQGKVVKRYGSIAKP 158 The following BLAST results are available for this feature:
BLAST of FC925268 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 102
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925268 ID=FC925268; Name=FC925268; organism=Citrus clementina; type=EST; length=348bpback to top |