FC925272

Overview
NameFC925272
Unique NameFC925272
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length723
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT2_POPTM (Caffeic acid 3-O-methyltransferase 2 OS=Populus tremuloides GN=OMT2 PE=3 SV=1)

HSP 1 Score: 249.595 bits (636), Expect = 1.255e-65
Identity = 128/227 (56.39%), Postives = 157/227 (69.16%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            D+   +A QL+  +VLPM ++   EL + EI+ K GPGA L  SDIA+ L TKN +AP+MLDRILRLLASYS++ CSL         RLY L SV K+   N+DGV + PL  MNQDKVL+ESW  LKDAILEGGIPFN+A+G+  FEY G DPRFNK FN  M  ++ + M  ILE+YKGF+ +  LVDVGG  G  +  I +KYP IKGINFD PHVI  AP+ P
Sbjct:   16 DEEANFALQLISSSVLPMVLKTAIELDLLEIMAKAGPGALLPPSDIASHLPTKNPNAPVMLDRILRLLASYSILICSLRDLPDGKVERLYGLASVCKFLTRNEDGVSVSPLCLMNQDKVLMESWYHLKDAILEGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSVHSKMAMKKILETYKGFEGLASLVDVGGGTGAVVSTIVSKYPSIKGINFDLPHVIADAPAFP 242          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_PRUDU (Caffeic acid 3-O-methyltransferase OS=Prunus dulcis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 249.21 bits (635), Expect = 1.639e-65
Identity = 126/227 (55.51%), Postives = 161/227 (70.93%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLD--ASG-ARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +++  +A QL   +VLPM ++A  EL + EI+ K GPG  L  +DIA+QL TKN DAP+MLDR+LRLLASYS++  SL   A G   RLY L  V K+   N++GV + PL  MNQDKVLLESW  LKDA+LEGGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+YKGF+ +  +VDVGG  G  L  I +KYP IKGINFD PHVI+ AP +P
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGVFLSPTDIASQLPTKNPDAPVMLDRMLRLLASYSILTYSLRTLADGKVERLYGLGPVCKFLTKNEEGVSIAPLCLMNQDKVLLESWYHLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMADHSTITMKKILETYKGFEGLTSVVDVGGGTGAVLNMIVSKYPSIKGINFDLPHVIEDAPQYP 243          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_MEDSA (Caffeic acid 3-O-methyltransferase OS=Medicago sativa PE=1 SV=1)

HSP 1 Score: 245.743 bits (626), Expect = 1.812e-64
Identity = 120/227 (52.86%), Postives = 162/227 (71.37%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASG---ARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +++  +A QL   +VLPM +++  EL + EI+ K GPGA++   +IA+QL T N DAP+MLDR+LRLLA Y ++ CS+        +RLY L +V+KY V N+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+Y GF+ +K LVDVGG  G  +  I +KYP IKGINFD PHVI+ APS+P
Sbjct:   17 EEANLFAMQLASASVLPMILKSALELDLLEIIAKAGPGAQISPIEIASQLPTTNPDAPVMLDRMLRLLACYIILTCSVRTQQDGKVQRLYGLATVAKYLVKNEDGVSISALNLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMTAFEYHGTDPRFNKVFNKGMSDHSTITMKKILETYTGFEGLKSLVDVGGGTGAVINTIVSKYPTIKGINFDLPHVIEDAPSYP 243          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_ROSCH (Caffeic acid 3-O-methyltransferase OS=Rosa chinensis GN=COMT1 PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.003e-63
Identity = 119/227 (52.42%), Postives = 159/227 (70.04%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +++  +A QL   +VLPM ++A  EL + EI+ K GPGA L  +D+A+QL TKN +AP+MLDR+LRLLASYS++  SL         RLY L  V K+   N+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  F+Y G DPRFNK FN  M +++++ M  ILE+YKGF+ +  +VDVGG  G  +  I +KYP IKGINFD PHVI+ AP +P
Sbjct:   17 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPNDLASQLPTKNPEAPVMLDRMLRLLASYSILTYSLRTLPDGKVERLYGLGPVCKFLTKNEDGVSIAALCLMNQDKVLVESWYHLKDAVLDGGIPFNKAYGMTAFDYHGTDPRFNKVFNKGMADHSTITMKKILETYKGFEGLTSIVDVGGGTGAVVNMIVSKYPSIKGINFDLPHVIEDAPQYP 243          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGU (Caffeic acid 3-O-methyltransferase OS=Eucalyptus gunnii GN=OMT PE=2 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.003e-63
Identity = 121/227 (53.30%), Postives = 158/227 (69.60%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +++  +A QL   +VLPM ++A  EL + EI+ K GPGA L   ++AAQL T+N +AP+MLDRI RLLASYSV+ C+L         RLY L  V K+ V N+DGV +  L  MNQDK+L+ESW  LKDA+LEGGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  ILE+YKGF+ ++ +VDVGG  G  L  I  KYP +KGINFD PHVI+ AP  P
Sbjct:   18 EEANLFAMQLASASVLPMVLKAAIELDLLEIMAKAGPGAFLSPGEVAAQLPTQNPEAPVMLDRIFRLLASYSVLTCTLRNLPDGKVERLYGLAPVCKFLVKNEDGVSIAALNLMNQDKILMESWYYLKDAVLEGGIPFNKAYGMTAFEYHGTDPRFNKIFNRGMSDHSTITMKKILETYKGFEGLETVVDVGGGTGAVLSMIVAKYPSMKGINFDLPHVIEDAPPLP 244          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_EUCGL (Caffeic acid 3-O-methyltransferase (Fragment) OS=Eucalyptus globulus GN=COMT1 PE=3 SV=1)

HSP 1 Score: 242.276 bits (617), Expect = 2.003e-63
Identity = 120/222 (54.05%), Postives = 156/222 (70.27%), Query Frame = 2
Query:   62 YASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSL---DASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +A QL   +VLP  + A  EL + EI+ + GPGA L   ++A+QL T+N DAP+MLDRI RLLASYSV+ C+L         RLY L  + K+ V N+DGV L PL  ++QD+V LESW  +KDAILEGGIPF++AHG+  F+Y G DPRFNK FN AM ++++++M  ILE+Y GF+ +K +VDVGG  G  L  I  KYP IKGINFD PHVI+ APS+P
Sbjct:    4 FAMQLATASVLPAVLTAAIELDLLEIMARAGPGAYLTPGEVASQLPTQNPDAPVMLDRIFRLLASYSVLTCTLCDLPEGKVERLYGLAPLCKFLVKNEDGVSLAPLRLIDQDRVFLESWYYMKDAILEGGIPFHKAHGMTAFDYPGTDPRFNKIFNRAMSDHSTIMMKKILETYNGFEGLKTVVDVGGGTGAILNMIVAKYPSIKGINFDLPHVIEDAPSYP 225          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_CLABR (Caffeic acid 3-O-methyltransferase OS=Clarkia breweri GN=COMT PE=1 SV=1)

HSP 1 Score: 238.039 bits (606), Expect = 3.778e-62
Identity = 124/230 (53.91%), Postives = 155/230 (67.39%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKV---GPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDA---SGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +++  +A QL   +VLPM ++A  EL + EI+ K    G GA +  ++IAAQL T N DAP+MLDR+LRLLASYSVV CSL         RLY L  V K+   N+DGV L PL  MNQDKVL+ESW  LKDAIL+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  I E Y GF+ +  +VDVGG  G  L  I  KYP IKGINFD PHVI+ AP +P
Sbjct:   19 EEANLFAMQLASASVLPMVLKAAIELDVLEIMAKSIPHGSGAYISPAEIAAQLPTTNPDAPVMLDRVLRLLASYSVVTCSLRELPDGKVERLYGLAPVCKFLTKNEDGVSLAPLCLMNQDKVLMESWYYLKDAILDGGIPFNKAYGMTAFEYHGTDPRFNKVFNRGMSDHSTITMKKIFEMYTGFEALNTIVDVGGGTGAVLSMIVAKYPSIKGINFDLPHVIEDAPIYP 248          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: COMT1_ZINEL (Caffeic acid 3-O-methyltransferase OS=Zinnia elegans PE=2 SV=1)

HSP 1 Score: 224.557 bits (571), Expect = 4.323e-58
Identity = 113/227 (49.78%), Postives = 152/227 (66.96%), Query Frame = 2
Query:   47 DQSFAYASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQL-LTKNKDAPMMLDRILRLLASYSVVECSLDASG---ARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSH 715
            DQ+F +A QL   +VLPM ++   EL + E + K GP   + +S++ AQL    N +AP+M+DRI  LLASYSV+ C+L  +    A R Y L  V K+ + N  GV L PLL MNQDKVL+ESW  LKD +L+GGIPFN+A+G+  FEY G D RFNK FN+ M+N++++ M  I+E Y GF  +K LVDVGG  G +L  IT+K+  +KGINFD PHVI  A ++
Sbjct:    7 DQAFLFAMQLASASVLPMVLKTAIELDLLETIAKAGPHGSVSSSELVAQLPKVNNPEAPVMIDRICSLLASYSVLTCTLKETADGCAERFYGLAPVCKFLIKNDAGVSLAPLLLMNQDKVLMESWYYLKDPVLDGGIPFNKAYGMSAFEYHGKDQRFNKVFNSGMFNHSTMTMKKIVELYNGFSGLKTLVDVGGGTGASLNMITSKHKSLKGINFDLPHVIADATTY 233          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: OMT2_CHRAE (Quercetin 3-O-methyltransferase 2 OS=Chrysosplenium americanum GN=OMT2 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.802e-57
Identity = 110/219 (50.23%), Postives = 149/219 (68.04%), Query Frame = 2
Query:   62 YASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +A QL   +VLPM +++  EL + EI+   G    +  ++IA+ L T N DAP M+DRILRLL+ YSVV CS+ +   +R+Y L  V KY   N+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  + ++Y+GF  +  LVDVGG  G TL  I +KYP I+ INFD PHVI+ AP +P
Sbjct:    3 FAMQLACASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQTYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYP 219          
BLAST of FC925272 vs. ExPASy Swiss-Prot
Match: OMT1_CHRAE (Quercetin 3-O-methyltransferase 1 OS=Chrysosplenium americanum GN=OMT1 PE=1 SV=1)

HSP 1 Score: 221.861 bits (564), Expect = 2.802e-57
Identity = 110/219 (50.23%), Postives = 149/219 (68.04%), Query Frame = 2
Query:   62 YASQLVMGTVLPMAIQAVYELGIFEILDKVGPGAKLCASDIAAQLLTKNKDAPMMLDRILRLLASYSVVECSLDASGARRLYSLNSVSKYYVPNKDGVLLGPLLQMNQDKVLLESWSQLKDAILEGGIPFNRAHGVHVFEYAGLDPRFNKHFNTAMYNYTSLVMSNILESYKGFDNIKQLVDVGGSLGVTLQAITTKYPYIKGINFDQPHVIDHAPSHP 718
            +A QL   +VLPM +++  EL + EI+   G    +  ++IA+ L T N DAP M+DRILRLL+ YSVV CS+ +   +R+Y L  V KY   N+DGV +  L  MNQDKVL+ESW  LKDA+L+GGIPFN+A+G+  FEY G DPRFNK FN  M +++++ M  + ++Y+GF  +  LVDVGG  G TL  I +KYP I+ INFD PHVI+ AP +P
Sbjct:    3 FAMQLASASVLPMVLKSAIELDLLEIIR--GQDTCMSPTEIASHLPTTNPDAPAMVDRILRLLSCYSVVTCSVRSVDDQRVYGLAPVCKYLTKNQDGVSIAALCLMNQDKVLMESWYHLKDAVLDGGIPFNKAYGMSSFEYHGTDPRFNKVFNRGMSDHSTITMKKVFQAYQGFQGLTSLVDVGGGTGATLTMILSKYPTIRCINFDLPHVIEDAPEYP 219          
The following BLAST results are available for this feature:
BLAST of FC925272 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 29
Match NameE-valueIdentityDescription
COMT2_POPTM1.255e-6556.39Caffeic acid 3-O-methyltransferase 2 OS=Populus tr... [more]
COMT1_PRUDU1.639e-6555.51Caffeic acid 3-O-methyltransferase OS=Prunus dulci... [more]
COMT1_MEDSA1.812e-6452.86Caffeic acid 3-O-methyltransferase OS=Medicago sat... [more]
COMT1_ROSCH2.003e-6352.42Caffeic acid 3-O-methyltransferase OS=Rosa chinens... [more]
COMT1_EUCGU2.003e-6353.30Caffeic acid 3-O-methyltransferase OS=Eucalyptus g... [more]
COMT1_EUCGL2.003e-6354.05Caffeic acid 3-O-methyltransferase (Fragment) OS=E... [more]
COMT1_CLABR3.778e-6253.91Caffeic acid 3-O-methyltransferase OS=Clarkia brew... [more]
COMT1_ZINEL4.323e-5849.78Caffeic acid 3-O-methyltransferase OS=Zinnia elega... [more]
OMT2_CHRAE2.802e-5750.23Quercetin 3-O-methyltransferase 2 OS=Chrysospleniu... [more]
OMT1_CHRAE2.802e-5750.23Quercetin 3-O-methyltransferase 1 OS=Chrysospleniu... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP8YG16FM1 TF Citrus clementina cDNA clone KN0AAP8YG16, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925272 ID=FC925272; Name=FC925272; organism=Citrus clementina; type=EST; length=723bp
GAAATTCAAGAACTTTAAAATGGATTCTATAGTTGATGGAGAAAGAGACC
AAAGCTTTGCATATGCTAGTCAATTGGTGATGGGTACAGTGCTACCCATG
GCCATTCAAGCGGTGTATGAGCTGGGCATTTTCGAGATCCTAGACAAAGT
TGGTCCTGGTGCAAAGCTCTGTGCTTCAGATATTGCAGCCCAATTGCTTA
CCAAGAACAAAGACGCACCCATGATGCTGGATCGGATTCTCAGGCTTCTG
GCTAGCTACAGTGTTGTTGAATGCTCACTTGATGCTTCTGGTGCTCGGAG
ACTATATAGTTTGAATTCTGTCTCCAAATACTATGTGCCTAACAAAGATG
GCGTCTTACTAGGCCCCCTATTACAAATGAATCAGGACAAGGTCCTTCTG
GAAAGCTGGTCCCAACTCAAAGATGCTATTCTTGAAGGAGGAATTCCATT
TAATCGAGCCCATGGAGTGCATGTATTTGAGTACGCAGGATTGGACCCTA
GGTTCAATAAACATTTTAACACAGCAATGTATAACTATACCTCCCTGGTT
ATGAGCAACATTCTTGAATCTTACAAGGGCTTCGACAACATCAAGCAACT
GGTCGATGTTGGTGGCAGTCTCGGTGTTACTCTTCAAGCCATCACTACCA
AGTACCCCTATATTAAGGGCATCAATTTCGACCAGCCTCATGTTATTGAC
CATGCCCCATCACATCCCACGTA
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