FC925275

Overview
NameFC925275
Unique NameFC925275
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length640
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_BOVIN (Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1)

HSP 1 Score: 145.206 bits (365), Expect = 2.667e-34
Identity = 80/175 (45.71%), Postives = 104/175 (59.43%), Query Frame = 3
Query:  117 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVHHK-YFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            PE      +FR+Y         V   Y+  H  QT DFV+R   ++G  +   M++ E  ++L+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL     GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL NVL
Sbjct:   19 PEAAKDKDSFRNY-TSGPLLDRVFATYKLMHTWQTVDFVRRKHAQFGGFSYKRMTVMEAVDMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLALA--GE-PQWAVVGDTFPVGCRPQASVVFRDCTFQDNPDLQDPLYSTELGMYQPHCGLENVL 189          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_PIG (Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1)

HSP 1 Score: 142.895 bits (359), Expect = 1.324e-33
Identity = 78/175 (44.57%), Postives = 104/175 (59.43%), Query Frame = 3
Query:  117 PETNSFGQTFRDYGVESERQKGVEEFYRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVLLHPDFGELPQWAVVGDTFPVGCAFDESIVH-HKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            PE      +FR+Y         V   Y+  H  QT DFV++   ++G  +   M++ E  ++L+  VDESDPD+D P   H  QTAE IRK +P++DW HL GL+HDLGKVL+    GE PQWAVVGDTFPVGC    S+V     F++NPD  +P ++T+ G Y    GL N L
Sbjct:   16 PEAAKDKGSFRNY-TSGPLLDRVFRTYKLMHTWQTVDFVRKKHAQFGGFSYKRMTVLEAVDMLDGLVDESDPDVDFPNSFHAFQTAEGIRKAHPDKDWFHLVGLLHDLGKVLVLA--GE-PQWAVVGDTFPVGCRPQASVVFCDSTFQDNPDLQDPVYSTELGMYQPHCGLENAL 186          
BLAST of FC925275 vs. ExPASy Swiss-Prot
Match: MIOX_DANRE (Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=1)

HSP 1 Score: 142.124 bits (357), Expect = 2.258e-33
Identity = 72/150 (48.00%), Postives = 98/150 (65.33%), Query Frame = 3
Query:  195 YRTQHINQTCDFVKRMREEYGKLNRVEMSIWECCELLNEFVDESDPDLDEPQIEHLLQTAEAIRKDYPNEDWLHLTGLIHDLGKVL-LHPDFGELPQWAVVGDTFPVGCAFDESIV-HHKYFKENPDYNNPAFNTKNGAYSEGRGLNNVL 638
            Y+  H +QT DFVK+  + +   +   +S+ +  + L+E VDESDPD+D P   H  QTAE IR+++P++DW  L GLIHD+GKV+ L+ +    PQWAVVGDT+PVGC F  SIV  +  F+ NPD  NPA NT+ G Y    GL+ VL
Sbjct:   37 YKLMHTHQTLDFVKQKHQVWSNCSHFSLSMMDSIDSLDELVDESDPDVDFPNSFHAFQTAEGIRREHPDKDWFQLVGLIHDVGKVMALYSE----PQWAVVGDTYPVGCKFQNSIVFRNSTFEGNPDGKNPAPNTEFGIYEPQCGLDKVL 182          
The following BLAST results are available for this feature:
BLAST of FC925275 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 13
Match NameE-valueIdentityDescription
MIOX_BOVIN2.667e-3445.71Inositol oxygenase OS=Bos taurus GN=MIOX PE=2 SV=1[more]
MIOX_PIG1.324e-3344.57Inositol oxygenase OS=Sus scrofa GN=MIOX PE=1 SV=1[more]
MIOX_DANRE2.258e-3348.00Inositol oxygenase OS=Danio rerio GN=miox PE=2 SV=... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YF06FM1 TF Citrus clementina cDNA clone KN0AAP3YF06, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925275 ID=FC925275; Name=FC925275; organism=Citrus clementina; type=EST; length=640bp
CAAGAAGGAGAATTTTAATCACCAGGCTCTGCAATTGGCACAGGATGGCT
GTTCTCGCTGATTCAAATGACAACGAATTGGAGCAGCTGCAGGATGGAGG
AGAAGGATTCACGGTGCCTGAGACTAATTCGTTTGGTCAAACTTTCAGGG
ATTATGGTGTTGAAAGTGAGCGGCAAAAGGGCGTGGAGGAATTCTATAGA
ACTCAACATATTAATCAGACCTGTGACTTTGTGAAAAGGATGAGAGAAGA
GTATGGAAAACTGAATAGGGTGGAAATGAGTATATGGGAATGCTGTGAGC
TACTAAATGAATTTGTTGATGAGAGTGATCCCGACCTTGATGAGCCTCAA
ATTGAGCACTTGCTGCAGACAGCCGAGGCCATTAGGAAGGACTATCCTAA
TGAGGATTGGCTACATTTGACCGGTCTCATCCATGATCTTGGAAAGGTTC
TTCTTCATCCTGATTTTGGGGAACTTCCTCAGTGGGCTGTTGTTGGTGAC
ACATTCCCCGTTGGTTGTGCCTTTGATGAATCAATTGTTCACCACAAGTA
TTTTAAGGAGAATCCAGACTACAACAATCCTGCTTTTAACACCAAAAATG
GAGCTTATTCAGAAGGCCGTGGATTAAACAATGTGTTGAT
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