FC925292

Overview
NameFC925292
Unique NameFC925292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
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BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H3L2_LILLO (Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE=2 SV=3)

HSP 1 Score: 74.7146 bits (182), Expect = 5.202e-13
Identity = 47/86 (54.65%), Postives = 51/86 (59.30%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKS-APATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRF 301
            MAR K TAR STGGKAPRKQLA+KA RK+  P T GVK+P     G                  RKLPFQ LVR+I QD KT LRF
Sbjct:    1 MARMKHTARMSTGGKAPRKQLASKALRKAPPPPTKGVKQPTTTTSGKWRFARFH----------RKLPFQGLVRKIWQDLKTHLRF 76
The following BLAST results are available for this feature:
BLAST of FC925292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H3L2_LILLO5.202e-1354.65Histone H3-like 2 OS=Lilium longiflorum GN=gcH3 PE... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YF15FM1 TF Citrus clementina cDNA clone KN0AAP3YF15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925292 ID=FC925292; Name=FC925292; organism=Citrus clementina; type=EST; length=694bp
TTTTCCTGAGAATTAAACACGCTTTCCACTCATCCAATTTCAGAAAATGG
CTCGTACCAAGCAGACGGCAAGGAAGTCCACGGGAGGGAAGGCGCCACGT
AAGCAGCTGGCGACAAAGGCGGCTCGGAAGTCGGCGCCAGCGACGGGAGG
AGTGAAGAAGCCTCACCGTTTTAGGCCAGGAACCGTGGCTTTAAGAGAAA
TTAGGAAGTACCAGAAGAGCACTGAGCTTTTGATAAGGAAGCTTCCGTTC
CAGAGGCTCGTGAGAGAAATCGCTCAGGATTTTAAGACCGATCTGAGGTT
CCAGAGCAGCGCCGTTGCGGCTCTTCAAGAAGCTGCTGAGGCTTATCTTG
TGGGTCTCTTTGAAGATACCAATCTCTGCGCCATTCATGCTAAGAGGGTC
ACTATCATGCCCAAAGATATTCAGCTTGCTAGGAGGATCAGAGGAGAGAG
AGCTTAGTCGATTAATTGATTTGTATCTAGATCTGATTTGGCTTTTAGCG
TTTCAGTTTCTAAGAAATGGGTATGCAAGATTGTTTTGGAATGTAATGGA
AAGTTTGAATCTATTGTTACATTTGTTGGGTTTTTGTTTTTGCATTCCAT
GTGTTTGTTAAAAGTCTTATCTTTCAGTATAAATGAAGCAAAAAAAATAG
CGGATTCAAGTTTATTTGCAGTAATGAAAAAAAAAAAAAAAAAA
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