FC925292

Overview
NameFC925292
Unique NameFC925292
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length694
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_XENTR (Histone H3.3 OS=Xenopus tropicalis GN=TGas113e22.1 PE=1 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_XENLA (Histone H3.3 OS=Xenopus laevis PE=1 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_TRIPS (Histone H3.3 OS=Trichinella pseudospiralis GN=HHT3 PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEAAEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_SPISO (Histone H3.3 OS=Spisula solidissima PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_RAT (Histone H3.3 OS=Rattus norvegicus GN=H3f3b PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_RABIT (Histone H3.3 OS=Oryctolagus cuniculus GN=H3F3A PE=2 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_PIG (Histone H3.3 OS=Sus scrofa GN=H3F3A PE=2 SV=3)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_MOUSE (Histone H3.3 OS=Mus musculus GN=H3f3a PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_HUMAN (Histone H3.3 OS=Homo sapiens GN=H3F3A PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
[Close]
BLAST of FC925292 vs. ExPASy Swiss-Prot
Match: H33_DROME (Histone H3.3 OS=Drosophila melanogaster GN=His3.3A PE=1 SV=2)

HSP 1 Score: 224.942 bits (572), Expect = 3.113e-58
Identity = 116/136 (85.29%), Postives = 119/136 (87.50%), Query Frame = 2 
Query:   47 MARTKQTARKSTGGKAPRKQLATKAARKSAPATGGVKKPHRFRPGTVALREIRKYQKSTELLIRKLPFQRLVREIAQDFKTDLRFXXXXXXXXXXXXXXXXXGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 454
            MARTKQTARKSTGGKAPRKQLATKAARKSAP+TGGVKKPHR+RPGTVALREIR+YQKSTELLIRKLPFQRLVREIAQDFKTDLRF                 GLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA
Sbjct:    1 MARTKQTARKSTGGKAPRKQLATKAARKSAPSTGGVKKPHRYRPGTVALREIRRYQKSTELLIRKLPFQRLVREIAQDFKTDLRFQSAAIGALQEASEAYLVGLFEDTNLCAIHAKRVTIMPKDIQLARRIRGERA 136
The following BLAST results are available for this feature:
BLAST of FC925292 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 211
Match NameE-valueIdentityDescription
H33_XENTR3.113e-5885.29Histone H3.3 OS=Xenopus tropicalis GN=TGas113e22.1... [more]
H33_XENLA3.113e-5885.29Histone H3.3 OS=Xenopus laevis PE=1 SV=3[more]
H33_TRIPS3.113e-5885.29Histone H3.3 OS=Trichinella pseudospiralis GN=HHT3... [more]
H33_SPISO3.113e-5885.29Histone H3.3 OS=Spisula solidissima PE=1 SV=2[more]
H33_RAT3.113e-5885.29Histone H3.3 OS=Rattus norvegicus GN=H3f3b PE=1 SV... [more]
H33_RABIT3.113e-5885.29Histone H3.3 OS=Oryctolagus cuniculus GN=H3F3A PE=... [more]
H33_PIG3.113e-5885.29Histone H3.3 OS=Sus scrofa GN=H3F3A PE=2 SV=3[more]
H33_MOUSE3.113e-5885.29Histone H3.3 OS=Mus musculus GN=H3f3a PE=1 SV=2[more]
H33_HUMAN3.113e-5885.29Histone H3.3 OS=Homo sapiens GN=H3F3A PE=1 SV=2[more]
H33_DROME3.113e-5885.29Histone H3.3 OS=Drosophila melanogaster GN=His3.3A... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YF15FM1 TF Citrus clementina cDNA clone KN0AAP3YF15, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925292 ID=FC925292; Name=FC925292; organism=Citrus clementina; type=EST; length=694bp
TTTTCCTGAGAATTAAACACGCTTTCCACTCATCCAATTTCAGAAAATGG
CTCGTACCAAGCAGACGGCAAGGAAGTCCACGGGAGGGAAGGCGCCACGT
AAGCAGCTGGCGACAAAGGCGGCTCGGAAGTCGGCGCCAGCGACGGGAGG
AGTGAAGAAGCCTCACCGTTTTAGGCCAGGAACCGTGGCTTTAAGAGAAA
TTAGGAAGTACCAGAAGAGCACTGAGCTTTTGATAAGGAAGCTTCCGTTC
CAGAGGCTCGTGAGAGAAATCGCTCAGGATTTTAAGACCGATCTGAGGTT
CCAGAGCAGCGCCGTTGCGGCTCTTCAAGAAGCTGCTGAGGCTTATCTTG
TGGGTCTCTTTGAAGATACCAATCTCTGCGCCATTCATGCTAAGAGGGTC
ACTATCATGCCCAAAGATATTCAGCTTGCTAGGAGGATCAGAGGAGAGAG
AGCTTAGTCGATTAATTGATTTGTATCTAGATCTGATTTGGCTTTTAGCG
TTTCAGTTTCTAAGAAATGGGTATGCAAGATTGTTTTGGAATGTAATGGA
AAGTTTGAATCTATTGTTACATTTGTTGGGTTTTTGTTTTTGCATTCCAT
GTGTTTGTTAAAAGTCTTATCTTTCAGTATAAATGAAGCAAAAAAAATAG
CGGATTCAAGTTTATTTGCAGTAATGAAAAAAAAAAAAAAAAAA
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