FC925293
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: SET_HUMAN (Protein SET OS=Homo sapiens GN=SET PE=1 SV=3) HSP 1 Score: 92.8189 bits (229), Expect = 2.103e-18 Identity = 52/161 (32.30%), Postives = 85/161 (52.80%), Query Frame = 1 Query: 220 RKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDPK-GFKLEFYFDPNPYFKNSVLTKTYHMIDEDEPILEKAIGTEIEWYPG 699 ++ +E + E+Q+E D L + EE +E KY KL QP + KR E++ +P+FW+T N+ +S + E DE AL +L ++ +D K G++++FYFD NPYF+N VL+K +H+ + +P + TEI+W G Sbjct: 42 QEAIEHIDEVQNEIDRLNEQASEEILKVEQKYNKLRQPFFQKRSELI-----------------------AKIPNFWVTTFVNHPQVSALLGEEDEEALHYLTRVEVTEFEDIKSGYRIDFYFDENPYFENKVLSKEFHLNESGDP---SSKSTEIKWKSG 176
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: SET_DROME (Protein SET OS=Drosophila melanogaster GN=Set PE=1 SV=2) HSP 1 Score: 78.1814 bits (191), Expect = 5.361e-14 Identity = 58/178 (32.58%), Postives = 83/178 (46.63%), Query Frame = 1 Query: 106 RASLDEGARADLVGVLKNKLQNLAGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDPK-GFKLEFYFDPNPYFKNSVLTKTYHM 636 RA LD GA AD AG + + E L E + Q+E D L K EE +E KY KL +P Y KR E+V K +P+FW+T+ N+ +S + E +E L L ++ +D K G+++ F+FD NPYF+N VLTK +H+ Sbjct: 7 RAKLD-GAPAD------GNTSAAAGNNEEESEAL--------EQIDACQNEIDALNEKASEEILKVEQKYNKLRKPCYEKRSELV-----------------------KRIPNFWVTSFINHPQVSGILDEEEEECLHALNKLEVEEFEDIKSGYRINFHFDENPYFENKVLTKEFHL 146
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L3_MOUSE (Nucleosome assembly protein 1-like 3 OS=Mus musculus GN=Nap1l3 PE=2 SV=1) HSP 1 Score: 77.0258 bits (188), Expect = 1.194e-13 Identity = 43/106 (40.57%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 415 KATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTY---HMIDEDEPI------LEKAIGTEIEWYPG 699 K + KG+PD+WLT +KN D L I + DE LKFL D+ K+ P G+ EF+F PNPYF+N +L KTY D +P +E+ G +I+W G Sbjct: 342 KKEDPKGIPDYWLTVLKNVDKLGPMIQKCDEPILKFLSDVSLKFSNPGQPIGYTFEFHFLPNPYFRNELLMKTYIIRSKPDHYDPFFAWGWEIEECKGCKIDWRRG 447
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L3_PONAB (Nucleosome assembly protein 1-like 3 OS=Pongo abelii GN=NAP1L3 PE=2 SV=1) HSP 1 Score: 76.2554 bits (186), Expect = 2.037e-13 Identity = 42/106 (39.62%), Postives = 58/106 (54.72%), Query Frame = 1 Query: 415 KATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTY---HMIDEDEPI------LEKAIGTEIEWYPG 699 K + KG+PD+WL +KN D L I + DE LKFL D+ K+ + P + EF+F PNPYF+N VL KTY D ++P +E G +I+W G Sbjct: 308 KREDPKGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSDVSLKFSKPGQPVSYTFEFHFLPNPYFRNEVLVKTYIIKSKPDHNDPFFSWGWEIEDCEGCKIDWRRG 413
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L3_HUMAN (Nucleosome assembly protein 1-like 3 OS=Homo sapiens GN=NAP1L3 PE=2 SV=2) HSP 1 Score: 76.2554 bits (186), Expect = 2.037e-13 Identity = 42/106 (39.62%), Postives = 59/106 (55.66%), Query Frame = 1 Query: 415 KATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTYHM---IDEDEPI------LEKAIGTEIEWYPG 699 K + KG+PD+WL +KN D L I + DE LKFL D+ K+ + P + EF+F PNPYF+N VL KTY + D ++P +E G +I+W G Sbjct: 304 KREDPKGIPDYWLIVLKNVDKLGPMIQKYDEPILKFLSDVSLKFSKPGQPVSYTFEFHFLPNPYFRNEVLVKTYIIKAKPDHNDPFFSWGWEIEDCKGCKIDWRRG 409
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: NP1L3_RAT (Nucleosome assembly protein 1-like 3 OS=Rattus norvegicus GN=Nap1l3 PE=2 SV=1) HSP 1 Score: 72.4034 bits (176), Expect = 2.941e-12 Identity = 41/106 (38.68%), Postives = 57/106 (53.77%), Query Frame = 1 Query: 415 KATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDI--KWFRIDDPKGFKLEFYFDPNPYFKNSVLTKTY---HMIDEDEPI------LEKAIGTEIEWYPG 699 K +G+PD+WLT +KN D L I + DE LKFL D+ K+ P + EF+F PNPYF+N +L KTY D +P +E+ G +I+W G Sbjct: 335 KEDPPRGIPDYWLTVLKNVDKLGPMIQKCDEPILKFLSDVSLKFSNPGQPISYTFEFHFLPNPYFRNELLMKTYIIRSKPDHYDPFFAWGWEIEECKGCKIDWRRG 440
BLAST of FC925293 vs. ExPASy Swiss-Prot
Match: SPR2_CAEEL (Suppressor of presenilin-2 OS=Caenorhabditis elegans GN=spr-2 PE=1 SV=2) HSP 1 Score: 68.5514 bits (166), Expect = 4.247e-11 Identity = 49/173 (28.32%), Postives = 80/173 (46.24%), Query Frame = 1 Query: 175 AGQHSDVLEKLTPAVRKRVEVLREIQSEHDELEAKFFEERAALEAKYQKLYQPMYTKRYEIVNGVVEGAPNEVAMDQEEDKATEEKGVPDFWLTAMKNNDVLSEEITERDEGALKFLKDIKWFRIDDPK-GFKLEFYFDPNPYFKNSVLTKTYHMIDEDEPILEKAIGTEIEW 690 A + ++ ++ V++++ L IQ + D + EE +E + + P+Y KR ++ + +FW TA N+ +LS I E E L L+D++ +D + GFK+ FDPN YF N V+TK+YH + + P E TEIEW Sbjct: 13 ADEFPNLRSEVAGPVKEKLIELDAIQHQLDVMSENAAEEVLKVEQIFNQKRLPIYEKRKKLTTKI-----------------------DNFWQTAFLNHHLLSTAIPEEQEDLLAALRDLEVQEFEDLRSGFKIIMTFDPNEYFTNEVITKSYH-LQSESPSTEI---TEIEW 158 The following BLAST results are available for this feature:
BLAST of FC925293 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 27
Pages
Properties
Sequences
The
following sequences are available for this feature:
EST sequence >FC925293 ID=FC925293; Name=FC925293; organism=Citrus clementina; type=EST; length=748bpback to top |