FC925294

Overview
NameFC925294
Unique NameFC925294
TypeEST
OrganismCitrus clementina (Clementine)
Sequence length679
Libraries
Library NameType
TFcdna_library
Analyses
This EST is derived from or has results from the following analyses
Analysis NameDate Performed
BLAST: Citrus ESTs to Prunus persica proteins V12010-05-10
BLAST: Citrus ESTs to Populus V2 proteins2010-05-10
BLAST: Citrus ESTs to TAIR92010-05-10
BLAST: Citrus ESTs to SwissProt2010-05-10
Homology
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_NEOFI (Elongation factor G, mitochondrial OS=Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / FGSC A1164 / NRRL 181) GN=mef1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.444e-62
Identity = 116/162 (71.60%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  167 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWK 625
            D+ +P     + RLRNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K
Sbjct:   89 DNLDPAEAIRLSRLRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATFCDWVKKGDDGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFK 250          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_DROWI (Elongation factor G, mitochondrial OS=Drosophila willistoni GN=GK24732 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.444e-62
Identity = 115/144 (79.86%), Postives = 134/144 (93.06%), Query Frame = 2
Query:  197 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKV 628
            +E++RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P++V
Sbjct:   39 IEKIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRV 182          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_DEBHA (Elongation factor G, mitochondrial OS=Debaryomyces hansenii GN=MEF1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.444e-62
Identity = 113/148 (76.35%), Postives = 130/148 (87.84%), Query Frame = 2
Query:  194 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWK 625
            S  RLRNIG+SAHIDSGKTT TER+LFYTGRI  IHEVRGRD VGA MD MDLEREKGITIQSAAT C+W    KDY  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY +PR+ FINK+DRMG+DP++
Sbjct:   72 SSTRLRNIGVSAHIDSGKTTFTERVLFYTGRIKAIHEVRGRDAVGATMDHMDLEREKGITIQSAATFCSWDKDNKDYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVAGVQSQTVTVDRQMRRYNIPRVTFINKMDRMGSDPFR 219          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_ASPFU (Elongation factor G, mitochondrial OS=Aspergillus fumigatus GN=mef1 PE=3 SV=2)

HSP 1 Score: 237.654 bits (605), Expect = 4.444e-62
Identity = 116/162 (71.60%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  167 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWK 625
            D+ +P     + RLRNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K
Sbjct:   89 DNLDPAEAIRLSRLRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATFCDWIKKGDDGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFK 250          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_ASPFC (Elongation factor G, mitochondrial OS=Aspergillus fumigatus (strain CEA10 / CBS 144.89 / FGSC A1163) GN=mef1 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.444e-62
Identity = 116/162 (71.60%), Postives = 136/162 (83.95%), Query Frame = 2
Query:  167 DDKEPWWKESMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW---------KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWK 625
            D+ +P     + RLRNIGI+AHIDSGKTT TER+LFYTGRI  IHEVRGRD VGAKMDSMDLEREKGITIQSAAT C W         + Y IN+IDTPGH+DFT+EVERALRVLDGA+++LC+V GVQSQ+ITVDRQMRRY VPR++F+NK+DRMGA+P+K
Sbjct:   89 DNLDPAEAIRLSRLRNIGIAAHIDSGKTTCTERVLFYTGRIKAIHEVRGRDNVGAKMDSMDLEREKGITIQSAATFCDWIKKGDDGKEEKYHINLIDTPGHIDFTIEVERALRVLDGAVMILCAVSGVQSQTITVDRQMRRYNVPRISFVNKMDRMGANPFK 250          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFG2_TREDE (Elongation factor G 2 OS=Treponema denticola GN=fusA2 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.444e-62
Identity = 111/144 (77.08%), Postives = 132/144 (91.67%), Query Frame = 2
Query:  197 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKV 628
            + ++RNIGISAHIDSGKTTL+ERILFY  RIH +HEVRG+DGVGA MD+M+LE+E+GITIQSA+T   WKDY +N+IDTPGHVDFT+EVER+LRVLDGAILVLCSVGGVQSQSITVDRQ++RY VPR+AF+NK DR GA+P+KV
Sbjct:    5 ISKMRNIGISAHIDSGKTTLSERILFYCDRIHALHEVRGKDGVGATMDNMELEKERGITIQSASTQVKWKDYTVNVIDTPGHVDFTIEVERSLRVLDGAILVLCSVGGVQSQSITVDRQLKRYHVPRIAFVNKCDRTGANPFKV 148          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFG2_ANADE (Elongation factor G 2 OS=Anaeromyxobacter dehalogenans (strain 2CP-C) GN=fusA2 PE=3 SV=1)

HSP 1 Score: 237.654 bits (605), Expect = 4.444e-62
Identity = 116/142 (81.69%), Postives = 128/142 (90.14%), Query Frame = 2
Query:  203 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKV 628
            +LRNIGISAHIDSGKTTLTERILFYT RIH IHEV+G+DGVGA MDSM+LERE+GITI SAAT C WK   +NIIDTPGHVDFT+EVER+LRVLDGAILVLCSV GVQSQS+TVDRQMRRY VPRLAF+NK DR GA+P +V
Sbjct:    7 KLRNIGISAHIDSGKTTLTERILFYTKRIHAIHEVKGKDGVGATMDSMELERERGITIASAATHCEWKGLHLNIIDTPGHVDFTIEVERSLRVLDGAILVLCSVAGVQSQSLTVDRQMRRYNVPRLAFVNKCDRSGANPIRV 148          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_PICGU (Elongation factor G, mitochondrial OS=Pichia guilliermondii GN=MEF1 PE=3 SV=2)

HSP 1 Score: 237.269 bits (604), Expect = 5.804e-62
Identity = 113/148 (76.35%), Postives = 131/148 (88.51%), Query Frame = 2
Query:  194 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAW----KDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWK 625
            S  RLRNIG+SAHIDSGKTT TER+L+YTGRI  IHEVRGRD VGAKMD M+LEREKGITIQSAAT C+W    K+Y  N+IDTPGH+DFT+EVERALRVLDGA+LV+C+V GVQSQ++TVDRQMRRY VPR+ FINK+DRMGADP++
Sbjct:   66 SSSRLRNIGVSAHIDSGKTTFTERVLYYTGRIKAIHEVRGRDAVGAKMDHMELEREKGITIQSAATYCSWDKDDKNYHFNLIDTPGHIDFTIEVERALRVLDGAVLVVCAVSGVQSQTVTVDRQMRRYNVPRVTFINKMDRMGADPFR 213          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_DROPS (Elongation factor G, mitochondrial OS=Drosophila pseudoobscura pseudoobscura GN=GA18263 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.804e-62
Identity = 114/144 (79.17%), Postives = 134/144 (93.06%), Query Frame = 2
Query:  197 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKV 628
            +E++RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  +NIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDR+G++P++V
Sbjct:   38 IEKIRNIGISAHIDSGKTTLTERILFYTGRIAEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTMWKDTNVNIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRLGSNPYRV 181          
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_DROAN (Elongation factor G, mitochondrial OS=Drosophila ananassae GN=GF14034 PE=3 SV=1)

HSP 1 Score: 237.269 bits (604), Expect = 5.804e-62
Identity = 115/144 (79.86%), Postives = 134/144 (93.06%), Query Frame = 2
Query:  197 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKV 628
            ++++RNIGISAHIDSGKTTLTERILFYTGRI E+HEVRG+D VGA MDSM+LER++GITIQSAAT   WKD  INIIDTPGHVDFTVEVERALRVLDGA+LVLC+VGGVQSQ++TV+RQM+RY VP LAFINKLDRMG++P++V
Sbjct:   39 IDKIRNIGISAHIDSGKTTLTERILFYTGRIVEMHEVRGKDNVGATMDSMELERQRGITIQSAATYTLWKDTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCAVGGVQSQTLTVNRQMKRYNVPCLAFINKLDRMGSNPYRV 182          
The following BLAST results are available for this feature:
BLAST of FC925294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt)
Total hits: 500
Match NameE-valueIdentityDescription
EFGM_NEOFI4.444e-6271.60Elongation factor G, mitochondrial OS=Neosartorya ... [more]
EFGM_DROWI4.444e-6279.86Elongation factor G, mitochondrial OS=Drosophila w... [more]
EFGM_DEBHA4.444e-6276.35Elongation factor G, mitochondrial OS=Debaryomyces... [more]
EFGM_ASPFU4.444e-6271.60Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFGM_ASPFC4.444e-6271.60Elongation factor G, mitochondrial OS=Aspergillus ... [more]
EFG2_TREDE4.444e-6277.08Elongation factor G 2 OS=Treponema denticola GN=fu... [more]
EFG2_ANADE4.444e-6281.69Elongation factor G 2 OS=Anaeromyxobacter dehaloge... [more]
EFGM_PICGU5.804e-6276.35Elongation factor G, mitochondrial OS=Pichia guill... [more]
EFGM_DROPS5.804e-6279.17Elongation factor G, mitochondrial OS=Drosophila p... [more]
EFGM_DROAN5.804e-6279.86Elongation factor G, mitochondrial OS=Drosophila a... [more]

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Properties
Property NameValue
Genbank descriptionKN0AAP3YF17FM1 TF Citrus clementina cDNA clone KN0AAP3YF17, mRNA sequence.
Sequences
The following sequences are available for this feature:

EST sequence

>FC925294 ID=FC925294; Name=FC925294; organism=Citrus clementina; type=EST; length=679bp
ATTCCCACGATCTCCAGCACCACGTCTCCTCTACACTCTCTTCTCCTCTT
CGAGAACGACACCGACCAAATCCTCACCCCAATCTCCGTCTGCAGCCCTC
CTCCAAGGAAACTTCCACCTCCAATCGCGGCAGTTCTCGGCGGGAGGAAA
CCTCGCACGTGCGAAGGATGATAAGGAGCCATGGTGGAAGGAATCAATGG
AGCGGCTCCGAAATATCGGAATCTCGGCACATATCGATTCCGGAAAAACT
ACACTAACCGAGCGAATTCTGTTTTACACTGGACGGATTCACGAGATTCA
CGAGGTTCGAGGGCGAGACGGCGTCGGCGCCAAAATGGATTCTATGGATT
TGGAGCGTGAGAAAGGTATCACAATTCAGTCAGCCGCCACTAGCTGTGCT
TGGAAGGATTACCAGATTAATATAATTGACACTCCTGGACACGTAGACTT
CACAGTTGAAGTAGAAAGGGCTTTGCGAGTTCTTGATGGCGCAATTCTTG
TGCTTTGTAGTGTTGGTGGCGTGCAAAGTCAATCAATTACCGTTGACCGG
CAAATGAGGAGATACGAGGTGCCAAGACTGGCTTTCATTAACAAACTTGA
TAGAATGGGAGCTGATCCATGGAAAGTTTTTGGATCAGGCAAGGGCTAAG
CTGGCGCACCACCTGTGCTGCTGTGCAAG
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