FC925294
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Homology
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFG1_BORBU (Elongation factor G 1 OS=Borrelia burgdorferi GN=fusA PE=3 SV=2) HSP 1 Score: 229.565 bits (584), Expect = 1.210e-59 Identity = 112/142 (78.87%), Postives = 127/142 (89.44%), Query Frame = 2 Query: 203 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKV 628 +LRNIGISAHIDSGKTTLTERILFY +IH IHEV+G+DGVGA MDSM+LERE+GITI SAAT WKD+ INIIDTPGHVDFT+EVER+LRVLDGAILVL SV GVQSQSITVDRQ++RY VPRLAF+NK D+ GA+P+ V Sbjct: 5 KLRNIGISAHIDSGKTTLTERILFYCNKIHAIHEVKGKDGVGATMDSMELERERGITIASAATHVEWKDFPINIIDTPGHVDFTIEVERSLRVLDGAILVLDSVAGVQSQSITVDRQLKRYSVPRLAFVNKCDKTGANPYNV 146
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFG1_BORAP (Elongation factor G 1 OS=Borrelia afzelii (strain PKo) GN=fusA1 PE=3 SV=1) HSP 1 Score: 229.565 bits (584), Expect = 1.210e-59 Identity = 112/142 (78.87%), Postives = 127/142 (89.44%), Query Frame = 2 Query: 203 RLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKV 628 +LRNIGISAHIDSGKTTLTERILFY +IH IHEV+G+DGVGA MDSM+LERE+GITI SAAT WKD+ INIIDTPGHVDFT+EVER+LRVLDGAILVL SV GVQSQSITVDRQ++RY VPRLAF+NK D+ GA+P+ V Sbjct: 5 KLRNIGISAHIDSGKTTLTERILFYCNKIHAIHEVKGKDGVGATMDSMELERERGITIASAATHVEWKDFPINIIDTPGHVDFTIEVERSLRVLDGAILVLDSVAGVQSQSITVDRQLKRYSVPRLAFVNKCDKTGANPYNV 146
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_PONAB (Elongation factor G, mitochondrial OS=Pongo abelii GN=GFM1 PE=2 SV=1) HSP 1 Score: 229.18 bits (583), Expect = 1.580e-59 Identity = 109/140 (77.86%), Postives = 129/140 (92.14%), Query Frame = 2 Query: 200 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADP 619 E++RNIGISAHIDSGKTTLTER+L+YTGRI ++HEV+G+DGVGA MDSM+LER++GITIQSAAT WKD INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV+RQM+RY VP L FINKLDRMG++P Sbjct: 44 EKIRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRMGSNP 183
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_HUMAN (Elongation factor G, mitochondrial OS=Homo sapiens GN=GFM1 PE=1 SV=2) HSP 1 Score: 229.18 bits (583), Expect = 1.580e-59 Identity = 109/140 (77.86%), Postives = 129/140 (92.14%), Query Frame = 2 Query: 200 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADP 619 E++RNIGISAHIDSGKTTLTER+L+YTGRI ++HEV+G+DGVGA MDSM+LER++GITIQSAAT WKD INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV+RQM+RY VP L FINKLDRMG++P Sbjct: 44 EKIRNIGISAHIDSGKTTLTERVLYYTGRIAKMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVNRQMKRYNVPFLTFINKLDRMGSNP 183
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_MOUSE (Elongation factor G, mitochondrial OS=Mus musculus GN=Gfm1 PE=2 SV=1) HSP 1 Score: 228.024 bits (580), Expect = 3.521e-59 Identity = 109/140 (77.86%), Postives = 127/140 (90.71%), Query Frame = 2 Query: 200 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADP 619 E++RNIGISAHIDSGKTTLTER+L+YTGRI +HEV+G+DGVGA MDSM+LER++GITIQSAAT WKD INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV RQM+RY VP L FINKLDRMG++P Sbjct: 45 EKIRNIGISAHIDSGKTTLTERVLYYTGRIATMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWKDININIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVSRQMKRYNVPFLTFINKLDRMGSNP 184
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_RAT (Elongation factor G, mitochondrial OS=Rattus norvegicus GN=Gfm1 PE=1 SV=2) HSP 1 Score: 226.868 bits (577), Expect = 7.844e-59 Identity = 108/140 (77.14%), Postives = 127/140 (90.71%), Query Frame = 2 Query: 200 ERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADP 619 E++RNIGISAHIDSGKTTLTER+L+YTGRI +HEV+G+DGVGA MDSM+LER++GITIQSAAT W+D INIIDTPGHVDFT+EVERALRVLDGA+LVLC+VGGVQ Q++TV RQM+RY VP L FINKLDRMG++P Sbjct: 45 EKIRNIGISAHIDSGKTTLTERVLYYTGRIATMHEVKGKDGVGAVMDSMELERQRGITIQSAATYTMWRDVNINIIDTPGHVDFTIEVERALRVLDGAVLVLCAVGGVQCQTMTVSRQMKRYNVPFLTFINKLDRMGSNP 184
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_CHAGB (Elongation factor G, mitochondrial OS=Chaetomium globosum GN=MEF1 PE=3 SV=1) HSP 1 Score: 224.557 bits (571), Expect = 3.893e-58 Identity = 107/151 (70.86%), Postives = 130/151 (86.09%), Query Frame = 2 Query: 197 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKD--------YQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWK 625 + +RNIGI+AHIDSGKTT++ERILFYTGR IHEVRGRDGVGAKMDSM+LERE+GITIQSAAT WK Y N+IDTPGH+DFT+EVERA+RVLDGA++VLC+V GVQSQ+ITVDRQM+RY VPR++F+NK+DRMG++P+K Sbjct: 96 LSMVRNIGIAAHIDSGKTTVSERILFYTGRTKAIHEVRGRDGVGAKMDSMELERERGITIQSAATFADWKKVENGVEETYHFNLIDTPGHIDFTIEVERAMRVLDGAVMVLCAVSGVQSQTITVDRQMKRYNVPRISFVNKMDRMGSNPFK 246
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFG_RHOBA (Elongation factor G OS=Rhodopirellula baltica GN=fusA PE=3 SV=1) HSP 1 Score: 221.861 bits (564), Expect = 2.523e-57 Identity = 110/145 (75.86%), Postives = 130/145 (89.66%), Query Frame = 2 Query: 194 SMERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWKV 628 ++E++RNIGISAHIDSGKTTL+ERILFY+GRIH+I +VRG G GA MD M+LE+E+GITI SAATS Y IN+IDTPGHVDFTVEVER+LRVLDGA+LVLCSVGGVQSQSITVDRQM+RY++PRLAFINK+DR GA+P +V Sbjct: 2 NLEKVRNIGISAHIDSGKTTLSERILFYSGRIHKIEDVRG-GGDGATMDHMELEKERGITITSAATSVTHNGYHINLIDTPGHVDFTVEVERSLRVLDGAVLVLCSVGGVQSQSITVDRQMKRYQIPRLAFINKMDRTGANPRRV 145
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_CAEEL (Elongation factor G, mitochondrial OS=Caenorhabditis elegans GN=F29C12.4 PE=2 SV=1) HSP 1 Score: 216.468 bits (550), Expect = 1.060e-55 Identity = 106/143 (74.13%), Postives = 121/143 (84.62%), Query Frame = 2 Query: 197 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWK 625 +ER+RNIGISAHIDSGKTT+TERIL+Y GRI +HEVRG+D VGA MD MDLER++GITIQSAAT W INIIDTPGHVDFTVEVERALRVLDGA+LVLC VGGVQSQ+ TV+RQ+ RY VP + F+NK+DR GA P K Sbjct: 41 IERIRNIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMDLERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQLARYNVPFICFVNKMDRNGATPLK 183
BLAST of FC925294 vs. ExPASy Swiss-Prot
Match: EFGM_CAEBR (Elongation factor G, mitochondrial OS=Caenorhabditis briggsae GN=CBG02783 PE=3 SV=2) HSP 1 Score: 215.312 bits (547), Expect = 2.362e-55 Identity = 105/143 (73.43%), Postives = 121/143 (84.62%), Query Frame = 2 Query: 197 MERLRNIGISAHIDSGKTTLTERILFYTGRIHEIHEVRGRDGVGAKMDSMDLEREKGITIQSAATSCAWKDYQINIIDTPGHVDFTVEVERALRVLDGAILVLCSVGGVQSQSITVDRQMRRYEVPRLAFINKLDRMGADPWK 625 +ER+RNIGISAHIDSGKTT+TERIL+Y GRI +HEVRG+D VGA MD M+LER++GITIQSAAT W INIIDTPGHVDFTVEVERALRVLDGA+LVLC VGGVQSQ+ TV+RQ+ RY VP + F+NK+DR GA P K Sbjct: 40 IERIRNIGISAHIDSGKTTVTERILYYAGRIDSMHEVRGKDDVGATMDFMELERQRGITIQSAATYVDWHGTNINIIDTPGHVDFTVEVERALRVLDGAVLVLCGVGGVQSQTFTVNRQLARYNVPFICFVNKMDRNGASPLK 182 The following BLAST results are available for this feature:
BLAST of FC925294 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 500
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925294 ID=FC925294; Name=FC925294; organism=Citrus clementina; type=EST; length=679bpback to top |