FC925320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PMEU1_SOLLC (Pectinesterase/pectinesterase inhibitor U1 OS=Solanum lycopersicum GN=PMEU1 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.553e-31 Identity = 64/132 (48.48%), Postives = 86/132 (65.15%), Query Frame = 1 Query: 7 VFFFGDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGR 402 + F GDG T IT + N DG+ T H+ATV + +A++I F+N+AG KHQAVAL V +D+S FY C M YQDTLY H+ RQ++ C + GT+DFIFG+ +A FQ+C I R+P +VTA GR Sbjct: 323 IMFMGDGKSNTIITASRNVQDGSTTFHSATVVRVAGKVLARDITFQNTAGASKHQAVALCVGSDLSAFYRCDMLAYQDTLYVHSNRQFFVQCLVAGTVDFIFGNGAAVFQDCDIHARRPGSGQKNMVTAQGR 454
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME4_ARATH (Pectinesterase 4 OS=Arabidopsis thaliana GN=PME4 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.553e-31 Identity = 65/136 (47.79%), Postives = 89/136 (65.44%), Query Frame = 1 Query: 7 VFFFGDGMYKTRITGNLNYV--DGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGRNV 408 +F FGDG KT I+ N + GT T +ATV + E FMAK +GF+N+AGP HQA A+RV+ D ++ +NC DGYQDTLY + RQ+YR+C ++GT+DFIFG + QN +I+VRK + VTA G + Sbjct: 327 IFMFGDGARKTVISYNRSVALSRGTTTSLSATVQVESEGFMAKWMGFKNTAGPMGHQAAAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNCVVSGTVDFIFGKSATVIQNTLIVVRKGSKGQYNTVTADGNEL 462
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME35_ARATH (Probable pectinesterase/pectinesterase inhibitor 35 OS=Arabidopsis thaliana GN=PME35 PE=2 SV=1) HSP 1 Score: 132.109 bits (331), Expect = 8.553e-31 Identity = 67/133 (50.38%), Postives = 92/133 (69.17%), Query Frame = 1 Query: 7 VFFFGDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGRN 405 V GDG KT I G+ + G T +ATV+ +G+ F+A++I F NSAGP QAVALRV +D S+ Y CS+DGYQD+LYT +KRQ+YR+ ITGT+DFIFG+ + FQ+C ++ RK + + VTA GR+ Sbjct: 278 VMLVGDGKGKTVIVGSRSNRGGWNTYQSATVAAMGDGFIARDITFVNSAGPNSEQAVALRVGSDRSVVYRCSIDGYQDSLYTLSKRQFYRETDITGTVDFIFGNSAVVFQSCNLVSRKGSSDQN-YVTAQGRS 409
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME38_ARATH (Putative pectinesterase/pectinesterase inhibitor 38 OS=Arabidopsis thaliana GN=PME38 PE=2 SV=1) HSP 1 Score: 131.339 bits (329), Expect = 1.459e-30 Identity = 65/132 (49.24%), Postives = 88/132 (66.67%), Query Frame = 1 Query: 7 VFFFGDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGR 402 + GDG+ KT ITG+ + G T +AT G+ F+ ++I N+AGPE HQAVALR ++DMS+FY CS++GYQDTLY H+ RQ++R+C I GT+DFIFG+ +A QNC I R P N +TA R Sbjct: 217 IMITGDGIGKTIITGDKSKGRGFSTYKSATFVAEGDGFVGRDITIRNTAGPENHQAVALRSNSDMSVFYRCSIEGYQDTLYVHSGRQFFRECDIYGTVDFIFGNAAAVLQNCRIFARNP-PNGVNTITAQSR 347
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME64_ARATH (Probable pectinesterase/pectinesterase inhibitor 64 OS=Arabidopsis thaliana GN=PME64 PE=2 SV=2) HSP 1 Score: 129.028 bits (323), Expect = 7.241e-30 Identity = 66/138 (47.83%), Postives = 89/138 (64.49%), Query Frame = 1 Query: 7 VFFFGDGMYKTRITGNLNYVD-GTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIV-----RKPLDNHHCIVTAHGR 402 V F GDGM KT ITG+LN G T +ATV +LG+ FMA+++ EN+AG + HQAVA R D+D S+ NC G QDTLY H+ RQ+Y+ C I G +DFIFG+ +A FQ+C I++ + + +TAHGR Sbjct: 342 VVFIGDGMGKTVITGSLNVGQPGMTTFESATVGVLGDGFMARDLTIENTAGADAHQAVAFRSDSDFSVLENCEFLGNQDTLYAHSLRQFYKQCRIQGNVDFIFGNSAAVFQDCDILIASKHSKLEQGGANNAITAHGR 479
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME5_ARATH (Pectinesterase 5 OS=Arabidopsis thaliana GN=PME5 PE=2 SV=2) HSP 1 Score: 127.872 bits (320), Expect = 1.613e-29 Identity = 65/133 (48.87%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 7 VFFFGDGMYKTRITGN--LNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHG 399 +F FGDG KT I+ N + GT T + TV + E FMAK IGF+N+AGP HQAVA+RV+ D ++ +NC DGYQDTLY + RQ+YR+ ++GT+DFIFG + QN +I+VRK VTA G Sbjct: 334 IFMFGDGARKTVISYNRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPMGHQAVAIRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLIVVRKGNKGQFNTVTADG 466
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME37_ARATH (Probable pectinesterase/pectinesterase inhibitor VGDH2 OS=Arabidopsis thaliana GN=VGDH2 PE=2 SV=2) HSP 1 Score: 126.716 bits (317), Expect = 3.594e-29 Identity = 65/133 (48.87%), Postives = 86/133 (64.66%), Query Frame = 1 Query: 7 VFFFGDGMYKTRIT--GNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHG 399 +F FGDG +T IT ++ GT T + TV + E FMAK IGF+N+AGP HQAVALRV+ D ++ +NC DGYQDTLY + RQ+YR+ ++GT+DFIFG + QN +I+VRK VTA G Sbjct: 327 IFMFGDGATQTIITFDRSVKLSPGTTTSLSGTVQVESEGFMAKWIGFKNTAGPLGHQAVALRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILVRKGSPGQSNYVTADG 459
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME54_ARATH (Probable pectinesterase/pectinesterase inhibitor 54 OS=Arabidopsis thaliana GN=PME54 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.693e-29 Identity = 61/129 (47.29%), Postives = 88/129 (68.22%), Query Frame = 1 Query: 19 GDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLD-NHHCIVTAHGR 402 G+G T I G+ + GT TAT+++ G+ F+A++IG +N AGP HQA+AL + +D S+ Y CS+ GYQDTLY A RQ+YR+C I GTIDFIFG+ +A FQ+C I +R+P + ++ A+GR Sbjct: 252 GNGKDLTVIVGDDSATGGTSVPDTATMTVTGDGFIARDIGIKNIAGPRGHQAIALSITSDQSVLYRCSISGYQDTLYAAALRQFYRECDIYGTIDFIFGNAAAVFQSCNIFLRRPHGVKAYNVILANGR 380
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME30_ARATH (Probable pectinesterase 30 OS=Arabidopsis thaliana GN=PME30 PE=2 SV=1) HSP 1 Score: 126.331 bits (316), Expect = 4.693e-29 Identity = 63/128 (49.22%), Postives = 83/128 (64.84%), Query Frame = 1 Query: 19 GDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGR 402 GDG T ITGNL+ + T +TATV+ G F+ ++ F N+AGP K AVALRV DMS+ Y C ++GYQD LY H+ RQ+YR+C ITGT+DFI G+ A FQ C I+ R+P ++TA R Sbjct: 243 GDGQDLTIITGNLSASNVRRTYNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSR 370
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME19_ARATH (Probable pectinesterase/pectinesterase inhibitor 19 OS=Arabidopsis thaliana GN=PME19 PE=2 SV=1) HSP 1 Score: 124.405 bits (311), Expect = 1.783e-28 Identity = 62/128 (48.44%), Postives = 82/128 (64.06%), Query Frame = 1 Query: 19 GDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGR 402 GDG T IT NL+ + T +TATV+ G F+ ++ F N+AGP K AVALRV DMS+ Y C ++GYQD LY H+ RQ+YR+C ITGT+DFI G+ A FQ C I+ R+P ++TA R Sbjct: 270 GDGQDLTIITSNLSASNVRRTFNTATVASNGNGFIGVDMCFRNTAGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHSDRQFYRECFITGTVDFICGNAVAVFQFCQIVARQPKMGQSNVITAQSR 397 The following BLAST results are available for this feature:
BLAST of FC925320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925320 ID=FC925320; Name=FC925320; organism=Citrus clementina; type=EST; length=410bpback to top |