FC925320
Overview
Libraries
Analyses
This EST is derived from or has results from the following analyses
Alignments
Homology
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME42_ARATH (Probable pectinesterase/pectinesterase inhibitor 42 OS=Arabidopsis thaliana GN=PME42 PE=2 SV=1) HSP 1 Score: 123.635 bits (309), Expect = 3.042e-28 Identity = 61/128 (47.66%), Postives = 81/128 (63.28%), Query Frame = 1 Query: 19 GDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGR 402 GDG T ITGNL+ + T +TAT + G+ F+ ++ F N+ GP K AVALRV DMS+ Y C ++GYQD LY H RQ+YR+C ITGT+DFI G+ +A FQ C I+ R+P +TA R Sbjct: 270 GDGQDSTIITGNLSASNVRRTFYTATFASNGKGFIGVDMCFRNTVGPAKGPAVALRVSGDMSVIYRCRVEGYQDALYPHIDRQFYRECFITGTVDFICGNAAAVFQFCQIVARQPNMGQSNFITAQSR 397
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME_BRANA (Probable pectinesterase/pectinesterase inhibitor OS=Brassica napus GN=BP19 PE=2 SV=1) HSP 1 Score: 122.865 bits (307), Expect = 5.189e-28 Identity = 64/133 (48.12%), Postives = 84/133 (63.16%), Query Frame = 1 Query: 7 VFFFGDGMYKTRIT--GNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHG 399 VF FGDG +T IT ++ GT T + TV + E FMAK IGF+N+AGP HQAVA RV+ D ++ +NC DGYQDTLY + RQ+YR+ ++GT+DFIFG + QN +I+ RK VTA G Sbjct: 323 VFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGHQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFIFGKSATVIQNSLILCRKGSPGQTNHVTADG 455
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME_BRACM (Pectinesterase/pectinesterase inhibitor (Fragment) OS=Brassica campestris PE=2 SV=1) HSP 1 Score: 117.472 bits (293), Expect = 2.180e-26 Identity = 62/134 (46.27%), Postives = 84/134 (62.69%), Query Frame = 1 Query: 7 VFFFGDGMYKTRIT--GNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGR 402 VF FGDG +T IT ++ GT T + TV + E FMAK IGF+N+AGP +QAVA RV+ D ++ +NC DGYQDTLY + RQ+YR+ ++GT+DFI G + QN +I+ RK VTA G+ Sbjct: 310 VFMFGDGATQTIITFDRSVGLSPGTTTSLSGTVQVESEGFMAKWIGFQNTAGPLGNQAVAFRVNGDRAVIFNCRFDGYQDTLYVNNGRQFYRNIVVSGTVDFINGKSATVIQNSLILCRKGSPGQTNHVTADGK 443
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME31_ARATH (Pectinesterase 31 OS=Arabidopsis thaliana GN=PME31 PE=1 SV=1) HSP 1 Score: 98.2117 bits (243), Expect = 1.369e-20 Identity = 49/95 (51.58%), Postives = 63/95 (66.32%), Query Frame = 1 Query: 64 VDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCII 348 V GT T +V + GE F+A+NI FENSA QAVA+RV AD FYNC G+QDTLY H +QY +DC I G++DFIFG+ +A ++C I Sbjct: 86 VIGTGTFGCGSVIVEGEDFIAENITFENSAPEGSGQAVAIRVTADRCAFYNCRFLGWQDTLYLHHGKQYLKDCYIEGSVDFIFGNSTALLEHCHI 180
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME57_ARATH (Putative pectinesterase 57 OS=Arabidopsis thaliana GN=PME57 PE=3 SV=2) HSP 1 Score: 90.5077 bits (223), Expect = 2.854e-18 Identity = 47/110 (42.73%), Postives = 65/110 (59.09%), Query Frame = 1 Query: 22 DGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSAGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIII 351 DG T IT NL+ + T +TAT + G+ F+ ++ F N+ P K V LRV+ DMSI Y C ++ YQD LY H RQ YR+ + T+DFI G+ +A FQ C I+ Sbjct: 133 DGQDSTIITFNLSSSNSKRTFNTATFASNGDGFIRVDMCFRNTTWPVKGPVVTLRVNGDMSIIYRCRVEEYQDALYPHKNRQCYREYFLMDTVDFICGNAAAVFQFCQIV 242
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME53_ARATH (Probable pectinesterase 53 OS=Arabidopsis thaliana GN=PME53 PE=2 SV=1) HSP 1 Score: 90.5077 bits (223), Expect = 2.854e-18 Identity = 55/140 (39.29%), Postives = 77/140 (55.00%), Query Frame = 1 Query: 19 GDGMYKTRI----TGNLNYVDGTP--TMHTATVSILGEFFMAKNIGFENSA-----GPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGRN 405 G+G KT + T G P T ++A+ ++ FF+AKNI F N+ G QAVALRV AD + F+ C M G QDTLY H R YY+DC I G++DFIFG+ + ++ C + + + VTA GR+ Sbjct: 140 GEGAEKTTVEWGDTAQTPDSKGNPMGTYNSASFAVNSPFFVAKNITFRNTTPVPLPGAVGKQAVALRVSADNAAFFGCRMLGAQDTLYDHLGRHYYKDCYIEGSVDFIFGNALSLYEGCHV---HAIADKLGAVTAQGRS 276
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME8_ARATH (Probable pectinesterase 8 OS=Arabidopsis thaliana GN=PME8 PE=2 SV=2) HSP 1 Score: 87.8113 bits (216), Expect = 1.850e-17 Identity = 49/116 (42.24%), Postives = 62/116 (53.45%), Query Frame = 1 Query: 19 GDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSA-----GPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIII 351 G G T I N T + ATV + G F+AKNI F N A G QAVA+R+ D S F C G QDTL+ R Y++DC I G+IDFIFG+ + +Q+C II Sbjct: 145 GQGFDITAIAWNDTAYSANGTFYCATVQVFGSQFVAKNISFMNVAPIPKPGDVGAQAVAIRIAGDESAFVGCGFFGAQDTLHDDRGRHYFKDCYIQGSIDFIFGNAKSLYQDCRII 260
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME14_ARATH (Putative pectinesterase 14 OS=Arabidopsis thaliana GN=PME14 PE=2 SV=1) HSP 1 Score: 80.1073 bits (196), Expect = 3.857e-15 Identity = 48/134 (35.82%), Postives = 71/134 (52.99%), Query Frame = 1 Query: 19 GDGMYKTRITGNLNYVDGTPTMHTATVSILGEFFMAKNIGFENSA-----GPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGRN 405 G G +T I N T + +V++ GE F A NI F+N+A G QAVAL+V D + FY C G QDTL R +++ C I G+IDFIFG+ + +++C + + CI TA+G++ Sbjct: 96 GMGYSRTSIEWNNTTASSNGTFSSFSVAVFGEKFTAYNISFKNTAPAPNPGAVDAQAVALKVVGDKAAFYGCGFYGNQDTLLDQEGRHFFKGCFIEGSIDFIFGNGRSLYEDCTLHSIAKENTIGCI-TANGKD 228
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME68_ARATH (Probable pectinesterase 68 OS=Arabidopsis thaliana GN=PME68 PE=2 SV=1) HSP 1 Score: 79.337 bits (194), Expect = 6.579e-15 Identity = 42/113 (37.17%), Postives = 64/113 (56.64%), Query Frame = 1 Query: 79 TMHTATVSILGEFFMAKNIGFENSA-----GPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCIIIVRKPLDNHHCIVTAHGR 402 T TA+V++ +F A+NI F N+A G + QAVA R+ D + F C G QDTL A R Y+++C I G+IDFIFG+ + +++C + + + + AHGR Sbjct: 141 TYQTASVTVYANYFTARNISFTNTAPAPLPGMQGWQAVAFRISGDKAFFSGCGFYGAQDTLCDDAGRHYFKECYIEGSIDFIFGNGRSMYKDCEL---HSIASRFGSIAAHGR 250
BLAST of FC925320 vs. ExPASy Swiss-Prot
Match: PME62_ARATH (Pectinesterase QRT1 OS=Arabidopsis thaliana GN=QRT1 PE=2 SV=1) HSP 1 Score: 77.7962 bits (190), Expect = 1.914e-14 Identity = 41/94 (43.62%), Postives = 56/94 (59.57%), Query Frame = 1 Query: 79 TMHTATVSILGEFFMAKNIGFENS----AGPEKHQAVALRVDADMSIFYNCSMDGYQDTLYTHAKRQYYRDCTITGTIDFIFGDCSAFFQNCII 348 T TA+VSI +FF A I FEN+ AG + QAVALR+ D ++FY + G QDTL+ Y+ C I G +DFIFG+ + +Q+C I Sbjct: 164 TYRTASVSIESDFFCATAITFENTVVAEAGEQGRQAVALRIIGDKAVFYRVRVLGSQDTLFDDNGSHYFYQCYIQGNVDFIFGNAKSLYQDCDI 257 The following BLAST results are available for this feature:
BLAST of FC925320 vs. ExPASy Swiss-Prot
Analysis Date: 2010-05-10 (BLAST: Citrus ESTs to SwissProt) Total hits: 80
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Sequences
The
following sequences are available for this feature:
EST sequence >FC925320 ID=FC925320; Name=FC925320; organism=Citrus clementina; type=EST; length=410bpback to top |